RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W LSO2Q3E772 92 aaKnown RBP1.24□□□□□ -2.21
SEC22YLR268W DRS2P39524 1355 aa1.23□□□□□ -2.21
SEC22YLR268W THP2O13539 261 aaKnown RBP1.23□□□□□ -2.21
SEC22YLR268W FBA1P14540 359 aaKnown RBP1.23□□□□□ -2.21
SEC22YLR268W SCL1P21243 252 aaKnown RBP1.23□□□□□ -2.21
SEC22YLR268W YBR063CP38083 404 aa1.23□□□□□ -2.21
SEC22YLR268W MIC12P38341 106 aa1.23□□□□□ -2.21
SEC22YLR268W YIL001WP40560 513 aa1.23□□□□□ -2.21
SEC22YLR268W OTU1P43558 301 aa1.23□□□□□ -2.21
SEC22YLR268W MIC26P50087 233 aa1.23□□□□□ -2.21
SEC22YLR268W YGR219WP53307 113 aa1.23□□□□□ -2.21
SEC22YLR268W YMD8Q03697 442 aa1.23□□□□□ -2.21
SEC22YLR268W MRPS8Q03799 155 aa1.23□□□□□ -2.21
SEC22YLR268W CDC123Q05791 360 aa1.23□□□□□ -2.21
SEC22YLR268W NEJ1Q06148 342 aa1.23□□□□□ -2.21
SEC22YLR268W ARR2Q06597 130 aa1.23□□□□□ -2.21
SEC22YLR268W HEM25Q07534 307 aa1.23□□□□□ -2.21
SEC22YLR268W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.23□□□□□ -2.21not detected
SEC22YLR268W RUD3Q12234 484 aaKnown RBP1.23□□□□□ -2.21
SEC22YLR268W YHR139C-AO13536 103 aa1.22□□□□□ -2.21
SEC22YLR268W YPR170W-BP0C5R9 85 aa1.22□□□□□ -2.21
SEC22YLR268W NHP6BP11633 99 aaKnown RBP1.22□□□□□ -2.21
SEC22YLR268W YMR31P19955 123 aa1.22□□□□□ -2.21
SEC22YLR268W OAC1P32332 324 aa1.22□□□□□ -2.21
SEC22YLR268W PHO88P38264 188 aaPredicted RBP1.22□□□□□ -2.21
SEC22YLR268W DOG2P38773 246 aa1.22□□□□□ -2.21
SEC22YLR268W YHR180WP38868 163 aa1.22□□□□□ -2.21
SEC22YLR268W YRB1P41920 201 aaKnown RBP1.22□□□□□ -2.21
SEC22YLR268W BRR6P53062 197 aa1.22□□□□□ -2.21
SEC22YLR268W FYV6P53913 173 aa1.22□□□□□ -2.21
SEC22YLR268W DID2P69771 204 aa1.22□□□□□ -2.21
SEC22YLR268W BOL1Q3E793 110 aa1.22□□□□□ -2.21
SEC22YLR268W SEY1Q99287 776 aa1.22□□□□□ -2.21
SEC22YLR268W CDC8P00572 216 aa1.21□□□□□ -2.22
SEC22YLR268W RAS2P01120 322 aaKnown RBP1.21□□□□□ -2.22
SEC22YLR268W RPL28P02406 149 aaKnown RBP1.21□□□□□ -2.22
SEC22YLR268W URA6P15700 204 aa1.21□□□□□ -2.22
SEC22YLR268W RTC3P38804 111 aaPredicted RBP1.21□□□□□ -2.22
SEC22YLR268W IRC22P40006 225 aa1.21□□□□□ -2.22
SEC22YLR268W YKE4P40544 346 aa1.21□□□□□ -2.22
SEC22YLR268W MSS2P40990 351 aa1.21□□□□□ -2.22
SEC22YLR268W GCN20P43535 752 aaKnown RBP1.21□□□□□ -2.22
SEC22YLR268W BAT2P47176 376 aaKnown RBP1.21□□□□□ -2.22
SEC22YLR268W ERG25P53045 309 aa1.21□□□□□ -2.22
SEC22YLR268W USB1Q12208 290 aaKnown RBP1.21□□□□□ -2.22
SEC22YLR268W DCN1Q12395 269 aa1.21□□□□□ -2.22
SEC22YLR268W COQ1P18900 473 aa1.2□□□□□ -2.22
SEC22YLR268W ATG22P25568 528 aa1.2□□□□□ -2.22
SEC22YLR268W PBN1P25580 416 aa1.2□□□□□ -2.22
SEC22YLR268W ERV15P38312 142 aa1.2□□□□□ -2.22
SEC22YLR268W URA8P38627 578 aaPredicted RBP1.2□□□□□ -2.22
SEC22YLR268W ERG28P40030 148 aa1.2□□□□□ -2.22
SEC22YLR268W AYR1P40471 297 aa1.2□□□□□ -2.22
SEC22YLR268W BMT5P40493 336 aa1.2□□□□□ -2.22
SEC22YLR268W PRM10P42946 383 aa1.2□□□□□ -2.22
SEC22YLR268W PRM8P53174 237 aa1.2□□□□□ -2.22
SEC22YLR268W ALG13P53178 202 aa1.2□□□□□ -2.22
SEC22YLR268W TIM11P81449 96 aaPredicted RBP1.2□□□□□ -2.22
SEC22YLR268W CYT2Q00873 224 aa1.2□□□□□ -2.22
SEC22YLR268W YDR248CQ03786 193 aa1.2□□□□□ -2.22
SEC22YLR268W TRM12Q04235 462 aa1.2□□□□□ -2.22
SEC22YLR268W LPP1Q04396 274 aa1.2□□□□□ -2.22
SEC22YLR268W RNH1Q04740 348 aa1.2□□□□□ -2.22
SEC22YLR268W PSF1Q12488 208 aa1.2□□□□□ -2.22
SEC22YLR268W YKL183C-AQ3E765 70 aa1.2□□□□□ -2.22
SEC22YLR268W CDC28P00546 298 aaKnown RBP1.19□□□□□ -2.22
SEC22YLR268W REP2P03872 296 aa1.19□□□□□ -2.22
SEC22YLR268W YBR121C-AP0C5L4 52 aa1.19□□□□□ -2.22
SEC22YLR268W STE18P18852 110 aa1.19□□□□□ -2.22
SEC22YLR268W DBF2P22204 572 aa1.19□□□□□ -2.22
SEC22YLR268W APS1P35181 156 aa1.19□□□□□ -2.22
SEC22YLR268W SRY1P36007 326 aa1.19□□□□□ -2.22
SEC22YLR268W CBT1P36038 271 aaPredicted RBP1.19□□□□□ -2.22
SEC22YLR268W YHR022CP38763 256 aa1.19□□□□□ -2.22
SEC22YLR268W VTC1P40046 129 aaRIP-Chip data1.19□□□□□ -2.22not detected
SEC22YLR268W LSM4P40070 187 aaKnown RBP1.19□□□□□ -2.22
SEC22YLR268W PEP8P40335 379 aa1.19□□□□□ -2.22
SEC22YLR268W YFR054CP43622 192 aa1.19□□□□□ -2.22
SEC22YLR268W BXI1P48558 297 aa1.19□□□□□ -2.22
SEC22YLR268W NUP57P48837 541 aa1.19□□□□□ -2.22
SEC22YLR268W AIF1P52923 378 aa1.19□□□□□ -2.22
SEC22YLR268W YNL010WP53981 241 aaKnown RBP1.19□□□□□ -2.22
SEC22YLR268W JLP1Q12358 412 aa1.19□□□□□ -2.22
SEC22YLR268W NCB2Q92317 146 aa1.19□□□□□ -2.22
SEC22YLR268W DDI2P0CH63 225 aa1.18□□□□□ -2.22
SEC22YLR268W DDI3P0CH64 225 aa1.18□□□□□ -2.22
SEC22YLR268W PET9P18239 318 aaKnown RBP1.18□□□□□ -2.22
SEC22YLR268W MDH2P22133 377 aa1.18□□□□□ -2.22
SEC22YLR268W MEI4P29467 408 aa1.18□□□□□ -2.22
SEC22YLR268W PRP18P33411 251 aaPredicted RBP1.18□□□□□ -2.22
SEC22YLR268W PRX1P34227 261 aaKnown RBP1.18□□□□□ -2.22
SEC22YLR268W POP4P38336 279 aa1.18□□□□□ -2.22
SEC22YLR268W DSE2P38844 325 aa1.18□□□□□ -2.22
SEC22YLR268W SVP26P38869 228 aa1.18□□□□□ -2.22
SEC22YLR268W YNL194CP40169 301 aa1.18□□□□□ -2.22
SEC22YLR268W PGD1P40356 397 aa1.18□□□□□ -2.22
SEC22YLR268W RPL33BP41056 107 aaKnown RBP1.18□□□□□ -2.22
SEC22YLR268W FAR7P43592 221 aa1.18□□□□□ -2.22
SEC22YLR268W ADO1P47143 340 aaKnown RBP1.18□□□□□ -2.22
SEC22YLR268W PGA2P53903 129 aa1.18□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 39.4 ms