RNA–Protein interactions for RNA: YKL108W

SLD2, Transcript of Single-stranded DNA origin-binding and annealing protein, yeast

Gene SLD2, Length 1,362 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLD2	YKL108W	SNF6	P18888	332 aa		4.15	□□□□□ -1.74
SLD2	YKL108W	PHO80	P20052	293 aa		4.15	□□□□□ -1.74
SLD2	YKL108W	SPS18	P32572	300 aa		4.15	□□□□□ -1.74
SLD2	YKL108W	CAT2	P32796	670 aa	Known RBP	4.15	□□□□□ -1.74
SLD2	YKL108W	FMP46	P36141	133 aa	Known RBP	4.15	□□□□□ -1.74
SLD2	YKL108W	ETR1	P38071	380 aa		4.15	□□□□□ -1.74
SLD2	YKL108W	POP8	P38208	133 aa		4.15	□□□□□ -1.74
SLD2	YKL108W	YMR144W	P40214	342 aa	Known RBP	4.15	□□□□□ -1.74
SLD2	YKL108W	UTP18	P40362	594 aa	Predicted RBP	4.15	□□□□□ -1.74
SLD2	YKL108W	CPR7	P47103	393 aa		4.15	□□□□□ -1.74
SLD2	YKL108W	YGL260W	P53056	76 aa		4.15	□□□□□ -1.74
SLD2	YKL108W	PRM15	Q03262	622 aa		4.15	□□□□□ -1.74
SLD2	YKL108W	DYN3	Q04949	312 aa		4.15	□□□□□ -1.74
SLD2	YKL108W	SEI1	Q06058	285 aa		4.15	□□□□□ -1.74
SLD2	YKL108W	TAD3	Q9URQ3	322 aa		4.15	□□□□□ -1.74
SLD2	YKL108W	COX5A	P00424	153 aa		4.14	□□□□□ -1.75
SLD2	YKL108W	FBA1	P14540	359 aa	Known RBP	4.14	□□□□□ -1.75
SLD2	YKL108W	DBF2	P22204	572 aa		4.14	□□□□□ -1.75
SLD2	YKL108W	YGL159W	P53110	370 aa		4.14	□□□□□ -1.75
SLD2	YKL108W	API2	Q04413	109 aa		4.14	□□□□□ -1.75
SLD2	YKL108W	COA4	Q05809	96 aa		4.14	□□□□□ -1.75
SLD2	YKL108W	YDR018C	Q12185	396 aa		4.14	□□□□□ -1.75
SLD2	YKL108W	URB1	P34241	1764 aa	Known RBP	4.14	□□□□□ -1.75
SLD2	YKL108W	YRF1-2	P40105	1681 aa		4.14	□□□□□ -1.75
SLD2	YKL108W	ZRT3	P34240	503 aa		4.14	□□□□□ -1.75
SLD2	YKL108W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
SLD2	YKL108W	EFM1	P38732	585 aa		4.14	□□□□□ -1.75
SLD2	YKL108W	AST2	P39945	430 aa	Known RBP	4.14	□□□□□ -1.75
SLD2	YKL108W	IRC18	P47056	224 aa		4.14	□□□□□ -1.75
SLD2	YKL108W	SNX4	P47057	423 aa		4.14	□□□□□ -1.75
SLD2	YKL108W	RRP17	Q04031	235 aa	Predicted RBP	4.14	□□□□□ -1.75
SLD2	YKL108W	ECM11	Q04110	302 aa		4.14	□□□□□ -1.75
SLD2	YKL108W	RRP40	Q08285	240 aa	Known RBP	4.14	□□□□□ -1.75
SLD2	YKL108W	TPO4	Q12256	659 aa		4.14	□□□□□ -1.75
SLD2	YKL108W	YAL063C-A	Q3E791	96 aa		4.14	□□□□□ -1.75
SLD2	YKL108W	YMR230W-A	Q3E7B5	62 aa		4.14	□□□□□ -1.75
SLD2	YKL108W	SPT3	P06844	337 aa		4.13	□□□□□ -1.75
SLD2	YKL108W	RPL35A	P0CX84	120 aa	Known RBP	4.13	□□□□□ -1.75
SLD2	YKL108W	RPL35B	P0CX85	120 aa	Known RBP	4.13	□□□□□ -1.75
SLD2	YKL108W	VPS51	P36116	164 aa		4.13	□□□□□ -1.75
SLD2	YKL108W	DRE2	P36152	348 aa		4.13	□□□□□ -1.75
SLD2	YKL108W	SWD3	P38123	315 aa		4.13	□□□□□ -1.75
SLD2	YKL108W	SHE3	P38272	425 aa	Known RBP	4.13	□□□□□ -1.75
SLD2	YKL108W	YFH7	P43591	353 aa		4.13	□□□□□ -1.75
SLD2	YKL108W	FAR7	P43592	221 aa		4.13	□□□□□ -1.75
SLD2	YKL108W	YJR149W	P47177	404 aa		4.13	□□□□□ -1.75
SLD2	YKL108W	OST3	P48439	350 aa		4.13	□□□□□ -1.75
SLD2	YKL108W	BRR6	P53062	197 aa		4.13	□□□□□ -1.75
SLD2	YKL108W	TOS8	P53147	276 aa		4.13	□□□□□ -1.75
SLD2	YKL108W	YGR018C	P53211	109 aa		4.13	□□□□□ -1.75
SLD2	YKL108W	SLX9	P53251	210 aa	Predicted RBP	4.13	□□□□□ -1.75
SLD2	YKL108W	BOR1	P53838	576 aa		4.13	□□□□□ -1.75
SLD2	YKL108W	YDR476C	Q03362	224 aa		4.13	□□□□□ -1.75
SLD2	YKL108W	FMN1	Q03778	218 aa		4.13	□□□□□ -1.75
SLD2	YKL108W	GPI17	Q04080	534 aa		4.13	□□□□□ -1.75
SLD2	YKL108W	YOL029C	Q08187	201 aa		4.13	□□□□□ -1.75
SLD2	YKL108W	YLR462W	O13556	202 aa		4.12	□□□□□ -1.75
SLD2	YKL108W	TFC1	P32367	649 aa		4.12	□□□□□ -1.75
SLD2	YKL108W	CPR5	P35176	225 aa		4.12	□□□□□ -1.75
SLD2	YKL108W	HMT1	P38074	348 aa		4.12	□□□□□ -1.75
SLD2	YKL108W	SMP1	P38128	452 aa		4.12	□□□□□ -1.75
SLD2	YKL108W	YBR032W	P38223	100 aa		4.12	□□□□□ -1.75
SLD2	YKL108W	PHO89	P38361	574 aa		4.12	□□□□□ -1.75
SLD2	YKL108W	YEL075C	P39972	122 aa		4.12	□□□□□ -1.75
SLD2	YKL108W	AVT6	P40074	448 aa		4.12	□□□□□ -1.75
SLD2	YKL108W	YER189W	P40104	122 aa		4.12	□□□□□ -1.75
SLD2	YKL108W	MCM22	P47167	239 aa		4.12	□□□□□ -1.75
SLD2	YKL108W	YIP3	P53633	176 aa		4.12	□□□□□ -1.75
SLD2	YKL108W	PAL1	Q05518	499 aa	Known RBP	4.12	□□□□□ -1.75
SLD2	YKL108W	DXO1	Q06349	442 aa		4.12	□□□□□ -1.75
SLD2	YKL108W	HRT3	Q12347	344 aa		4.12	□□□□□ -1.75
SLD2	YKL108W	RAX2	Q12465	1220 aa		4.12	□□□□□ -1.75
SLD2	YKL108W	MRX4	Q12467	430 aa		4.12	□□□□□ -1.75
SLD2	YKL108W	CDC28	P00546	298 aa	Known RBP	4.11	□□□□□ -1.75
SLD2	YKL108W	IPP1	P00817	287 aa	Known RBP	4.11	□□□□□ -1.75
SLD2	YKL108W	SRY1	P36007	326 aa		4.11	□□□□□ -1.75
SLD2	YKL108W	YCR087C-A	P37263	153 aa		4.11	□□□□□ -1.75
SLD2	YKL108W	SRP14	P38985	146 aa		4.11	□□□□□ -1.75
SLD2	YKL108W	FMP32	P43557	207 aa		4.11	□□□□□ -1.75
SLD2	YKL108W	APS3	P47064	194 aa		4.11	□□□□□ -1.75
SLD2	YKL108W	MMS2	P53152	137 aa		4.11	□□□□□ -1.75
SLD2	YKL108W	GTR2	P53290	341 aa		4.11	□□□□□ -1.75
SLD2	YKL108W	PDR17	P53844	350 aa		4.11	□□□□□ -1.75
SLD2	YKL108W	OSH6	Q02201	448 aa		4.11	□□□□□ -1.75
SLD2	YKL108W	VHS1	Q03785	461 aa		4.11	□□□□□ -1.75
SLD2	YKL108W	YOR186W	Q08560	144 aa		4.11	□□□□□ -1.75
SLD2	YKL108W	RTR2	Q12378	196 aa		4.11	□□□□□ -1.75
SLD2	YKL108W	TRM10	Q12400	293 aa		4.11	□□□□□ -1.75
SLD2	YKL108W	STF2	P16965	84 aa		4.1	□□□□□ -1.75
SLD2	YKL108W	TIP20	P33891	701 aa		4.1	□□□□□ -1.75
SLD2	YKL108W	VMA7	P39111	118 aa		4.1	□□□□□ -1.75
SLD2	YKL108W	MTW1	P39731	289 aa		4.1	□□□□□ -1.75
SLD2	YKL108W	RRG9	P40156	214 aa		4.1	□□□□□ -1.75
SLD2	YKL108W	POG1	P40473	351 aa		4.1	□□□□□ -1.75
SLD2	YKL108W	GAB1	P41733	394 aa		4.1	□□□□□ -1.75
SLD2	YKL108W	YJL016W	P47072	561 aa		4.1	□□□□□ -1.75
SLD2	YKL108W	YGL118C	P53132	145 aa		4.1	□□□□□ -1.75
SLD2	YKL108W	SWT21	P53873	357 aa	Predicted RBP	4.1	□□□□□ -1.75
SLD2	YKL108W	AAH1	P53909	347 aa		4.1	□□□□□ -1.75
SLD2	YKL108W	YNL046W	P53956	172 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 44.5 ms