RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W RPO26P20435 155 aa1.42□□□□□ -2.18
PEP8YJL053W RPL24BP24000 155 aaKnown RBP1.42□□□□□ -2.18
PEP8YJL053W CDC10P25342 322 aaKnown RBP1.42□□□□□ -2.18
PEP8YJL053W SSO1P32867 290 aa1.42□□□□□ -2.18
PEP8YJL053W VPS21P36017 210 aaKnown RBP1.42□□□□□ -2.18
PEP8YJL053W RPF1P38805 295 aaKnown RBP1.42□□□□□ -2.18
PEP8YJL053W YER085CP40058 173 aa1.42□□□□□ -2.18
PEP8YJL053W YIL001WP40560 513 aa1.42□□□□□ -2.18
PEP8YJL053W SMD3P43321 101 aaKnown RBP1.42□□□□□ -2.18
PEP8YJL053W YGR219WP53307 113 aa1.42□□□□□ -2.18
PEP8YJL053W DCR2Q05924 578 aa1.42□□□□□ -2.18
PEP8YJL053W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.42□□□□□ -2.18not detected
PEP8YJL053W NIP7Q08962 181 aaKnown RBP1.42□□□□□ -2.18
PEP8YJL053W LSO2Q3E772 92 aaKnown RBP1.42□□□□□ -2.18
PEP8YJL053W PDR15Q04182 1529 aaKnown RBP1.41□□□□□ -2.18
PEP8YJL053W MATALPHA1P0CY06 175 aa1.41□□□□□ -2.18
PEP8YJL053W HMLALPHA1P0CY07 175 aa1.41□□□□□ -2.18
PEP8YJL053W BMH2P34730 273 aaKnown RBP1.41□□□□□ -2.18
PEP8YJL053W TCD1P38756 429 aa1.41□□□□□ -2.18
PEP8YJL053W RPC17P47076 161 aa1.41□□□□□ -2.18
PEP8YJL053W TRM9P49957 279 aa1.41□□□□□ -2.18
PEP8YJL053W ERG25P53045 309 aa1.41□□□□□ -2.18
PEP8YJL053W NOP13P53883 403 aaKnown RBP RIP-Chip data1.41□□□□□ -2.18not detected
PEP8YJL053W NEJ1Q06148 342 aa1.41□□□□□ -2.18
PEP8YJL053W TAF2P23255 1407 aa1.4□□□□□ -2.18
PEP8YJL053W SSN2P38931 1420 aa1.4□□□□□ -2.18
PEP8YJL053W XRN1P22147 1528 aaKnown RBP1.4□□□□□ -2.18
PEP8YJL053W DNF2Q12675 1612 aa1.4□□□□□ -2.18
PEP8YJL053W SPT3P06844 337 aa1.4□□□□□ -2.19
PEP8YJL053W RPS5P26783 225 aaKnown RBP1.4□□□□□ -2.19
PEP8YJL053W PPA2P28239 310 aa1.4□□□□□ -2.19
PEP8YJL053W VMA6P32366 345 aaKnown RBP1.4□□□□□ -2.19
PEP8YJL053W YBR063CP38083 404 aa1.4□□□□□ -2.19
PEP8YJL053W VTC1P40046 129 aaRIP-Chip data1.4□□□□□ -2.19not detected
PEP8YJL053W PEX17P40155 199 aa1.4□□□□□ -2.19
PEP8YJL053W RPA43P46669 326 aa1.4□□□□□ -2.19
PEP8YJL053W BAT2P47176 376 aaKnown RBP1.4□□□□□ -2.19
PEP8YJL053W YJR149WP47177 404 aa1.4□□□□□ -2.19
PEP8YJL053W ERV29P53337 310 aa1.4□□□□□ -2.19
PEP8YJL053W MRPS8Q03799 155 aa1.4□□□□□ -2.19
PEP8YJL053W HEM25Q07534 307 aa1.4□□□□□ -2.19
PEP8YJL053W MSA1Q08471 629 aa1.4□□□□□ -2.19
PEP8YJL053W USB1Q12208 290 aaKnown RBP1.4□□□□□ -2.19
PEP8YJL053W BPT1P14772 1559 aa1.39□□□□□ -2.19
PEP8YJL053W PEP1P32319 1579 aa1.39□□□□□ -2.19
PEP8YJL053W RHO1P06780 209 aaKnown RBP1.39□□□□□ -2.19
PEP8YJL053W GRX2P17695 143 aaKnown RBP1.39□□□□□ -2.19
PEP8YJL053W SCL1P21243 252 aaKnown RBP1.39□□□□□ -2.19
PEP8YJL053W OAC1P32332 324 aa1.39□□□□□ -2.19
PEP8YJL053W NTF2P33331 125 aaKnown RBP1.39□□□□□ -2.19
PEP8YJL053W ECM33P38248 429 aaKnown RBP1.39□□□□□ -2.19
PEP8YJL053W PHO88P38264 188 aaPredicted RBP1.39□□□□□ -2.19
PEP8YJL053W ERV15P38312 142 aa1.39□□□□□ -2.19
PEP8YJL053W CTR2P38865 189 aa1.39□□□□□ -2.19
PEP8YJL053W FCY21P40039 528 aa1.39□□□□□ -2.19
PEP8YJL053W RTR1P40084 226 aaPredicted RBP1.39□□□□□ -2.19
PEP8YJL053W PEP8P40335 379 aa1.39□□□□□ -2.19
PEP8YJL053W YKE4P40544 346 aa1.39□□□□□ -2.19
PEP8YJL053W FYV6P53913 173 aa1.39□□□□□ -2.19
PEP8YJL053W DID2P69771 204 aa1.39□□□□□ -2.19
PEP8YJL053W RUD3Q12234 484 aaKnown RBP1.39□□□□□ -2.19
PEP8YJL053W TPO4Q12256 659 aa1.39□□□□□ -2.19
PEP8YJL053W SKI3P17883 1432 aaKnown RBP1.39□□□□□ -2.19
PEP8YJL053W NTE1Q04958 1679 aa1.39□□□□□ -2.19
PEP8YJL053W BEM2P39960 2167 aaKnown RBP1.38□□□□□ -2.19
PEP8YJL053W GEA2P39993 1459 aaKnown RBP1.38□□□□□ -2.19
PEP8YJL053W CDC8P00572 216 aa1.38□□□□□ -2.19
PEP8YJL053W YPR170W-BP0C5R9 85 aa1.38□□□□□ -2.19
PEP8YJL053W URA6P15700 204 aa1.38□□□□□ -2.19
PEP8YJL053W DOG2P38773 246 aa1.38□□□□□ -2.19
PEP8YJL053W AYR1P40471 297 aa1.38□□□□□ -2.19
PEP8YJL053W YRB1P41920 201 aaKnown RBP1.38□□□□□ -2.19
PEP8YJL053W YFR054CP43622 192 aa1.38□□□□□ -2.19
PEP8YJL053W MIC26P50087 233 aa1.38□□□□□ -2.19
PEP8YJL053W PRM8P53174 237 aa1.38□□□□□ -2.19
PEP8YJL053W CDC123Q05791 360 aa1.38□□□□□ -2.19
PEP8YJL053W ARR2Q06597 130 aa1.38□□□□□ -2.19
PEP8YJL053W GCN1P33892 2672 aaKnown RBP1.38□□□□□ -2.19
PEP8YJL053W THP2O13539 261 aaKnown RBP1.37□□□□□ -2.19
PEP8YJL053W RPL28P02406 149 aaKnown RBP1.37□□□□□ -2.19
PEP8YJL053W NHP6BP11633 99 aaKnown RBP1.37□□□□□ -2.19
PEP8YJL053W ATG22P25568 528 aa1.37□□□□□ -2.19
PEP8YJL053W MIC12P38341 106 aa1.37□□□□□ -2.19
PEP8YJL053W YHR180WP38868 163 aa1.37□□□□□ -2.19
PEP8YJL053W BMT5P40493 336 aa1.37□□□□□ -2.19
PEP8YJL053W OTU1P43558 301 aa1.37□□□□□ -2.19
PEP8YJL053W BRR6P53062 197 aa1.37□□□□□ -2.19
PEP8YJL053W TOS8P53147 276 aa1.37□□□□□ -2.19
PEP8YJL053W DCN1Q12395 269 aa1.37□□□□□ -2.19
PEP8YJL053W SEY1Q99287 776 aa1.37□□□□□ -2.19
PEP8YJL053W YPL229WQ99395 206 aa1.37□□□□□ -2.19
PEP8YJL053W MET5P47169 1442 aa1.37□□□□□ -2.19
PEP8YJL053W YPK9Q12697 1472 aa1.37□□□□□ -2.19
PEP8YJL053W YCF1P39109 1515 aaKnown RBP1.36□□□□□ -2.19
PEP8YJL053W YMR31P19955 123 aa1.36□□□□□ -2.19
PEP8YJL053W MDH2P22133 377 aa1.36□□□□□ -2.19
PEP8YJL053W TEL1P38110 2787 aa1.36□□□□□ -2.19
PEP8YJL053W YHR022CP38763 256 aa1.36□□□□□ -2.19
PEP8YJL053W DSE2P38844 325 aa1.36□□□□□ -2.19
PEP8YJL053W RPL33BP41056 107 aaKnown RBP1.36□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 85.5 ms