RNA–Protein interactions for RNA: YDR087C

RRP1, Transcript of Essential evolutionarily conserved nucleolar protein, yeastyeast

Gene RRP1, Length 837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP1YDR087C SCO1P23833 295 aa3.35□□□□□ -1.87
RRP1YDR087C MRPL39P36533 70 aa3.35□□□□□ -1.87
RRP1YDR087C YHR127WP38833 243 aaKnown RBP3.35□□□□□ -1.87
RRP1YDR087C YEL075CP39972 122 aa3.35□□□□□ -1.87
RRP1YDR087C MRPL49P40858 161 aaPredicted RBP3.35□□□□□ -1.87
RRP1YDR087C SMD3P43321 101 aaKnown RBP3.35□□□□□ -1.87
RRP1YDR087C YLR283WQ05867 314 aa3.35□□□□□ -1.87
RRP1YDR087C SEI1Q06058 285 aa3.35□□□□□ -1.87
RRP1YDR087C SAS5Q99314 248 aa3.35□□□□□ -1.87
RRP1YDR087C YRF1-2P40105 1681 aa3.35□□□□□ -1.87
RRP1YDR087C YCR102CP25608 368 aa3.34□□□□□ -1.87
RRP1YDR087C MSA2P36157 363 aa3.34□□□□□ -1.87
RRP1YDR087C NUP84P52891 726 aa3.34□□□□□ -1.87
RRP1YDR087C CFT1Q06632 1357 aaKnown RBP3.34□□□□□ -1.88
RRP1YDR087C GCN2P15442 1659 aa3.33□□□□□ -1.88
RRP1YDR087C MATALPHA1P0CY06 175 aa3.33□□□□□ -1.88
RRP1YDR087C HMLALPHA1P0CY07 175 aa3.33□□□□□ -1.88
RRP1YDR087C ERD2P18414 219 aa3.33□□□□□ -1.88
RRP1YDR087C SNF6P18888 332 aa3.33□□□□□ -1.88
RRP1YDR087C YCR016WP25617 290 aaKnown RBP3.33□□□□□ -1.88
RRP1YDR087C YGP1P38616 354 aaKnown RBP3.33□□□□□ -1.88
RRP1YDR087C CGI121Q03705 181 aaKnown RBP3.33□□□□□ -1.88
RRP1YDR087C YLR030WQ07967 263 aa3.33□□□□□ -1.88
RRP1YDR087C BBP1Q12365 385 aa3.33□□□□□ -1.88
RRP1YDR087C COS8P38723 381 aa3.32□□□□□ -1.88
RRP1YDR087C YHL026CP38740 315 aa3.32□□□□□ -1.88
RRP1YDR087C YGL159WP53110 370 aa3.32□□□□□ -1.88
RRP1YDR087C YPR172WQ06608 200 aa3.32□□□□□ -1.88
RRP1YDR087C MSA1Q08471 629 aa3.32□□□□□ -1.88
RRP1YDR087C FAR8Q05040 523 aa3.31□□□□□ -1.88
RRP1YDR087C YLR126CQ12288 251 aa3.31□□□□□ -1.88
RRP1YDR087C TOM1Q03280 3268 aa3.31□□□□□ -1.88
RRP1YDR087C CCA1P21269 546 aa3.3□□□□□ -1.88
RRP1YDR087C ERG24P32462 438 aaKnown RBP3.3□□□□□ -1.88
RRP1YDR087C SCM4P32564 187 aa3.3□□□□□ -1.88
RRP1YDR087C MNN5P46982 586 aa3.3□□□□□ -1.88
RRP1YDR087C YHR139C-AO13536 103 aa3.29□□□□□ -1.88
RRP1YDR087C COX5AP00424 153 aa3.29□□□□□ -1.88
RRP1YDR087C Q0255P03881 472 aa3.29□□□□□ -1.88
RRP1YDR087C MSN4P33749 630 aa3.29□□□□□ -1.88
RRP1YDR087C CTR2P38865 189 aa3.29□□□□□ -1.88
RRP1YDR087C YER085CP40058 173 aa3.29□□□□□ -1.88
RRP1YDR087C INM2Q05533 292 aa3.29□□□□□ -1.88
RRP1YDR087C SNA3P14359 133 aa3.28□□□□□ -1.88
RRP1YDR087C MRPL25P23369 157 aa3.28□□□□□ -1.88
RRP1YDR087C YHR125WP38831 101 aa3.28□□□□□ -1.88
RRP1YDR087C RPC17P47076 161 aa3.28□□□□□ -1.88
RRP1YDR087C LIA1P47120 325 aaKnown RBP3.28□□□□□ -1.88
RRP1YDR087C NOP13P53883 403 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
RRP1YDR087C FKS1P38631 1876 aaKnown RBP3.28□□□□□ -1.88
RRP1YDR087C YHR032W-AP0C5N6 59 aa3.27□□□□□ -1.89
RRP1YDR087C ARC15P40518 154 aaRIP-Chip data3.27□□□□□ -1.89not detected
RRP1YDR087C YJR149WP47177 404 aa3.27□□□□□ -1.89
RRP1YDR087C DAN1P47178 298 aa3.27□□□□□ -1.89
RRP1YDR087C GTR2P53290 341 aa3.27□□□□□ -1.89
RRP1YDR087C PDR5P33302 1511 aaKnown RBP3.27□□□□□ -1.89
RRP1YDR087C SRB4P32569 687 aa3.26□□□□□ -1.89
RRP1YDR087C NTF2P33331 125 aaKnown RBP3.26□□□□□ -1.89
RRP1YDR087C RPA43P46669 326 aa3.26□□□□□ -1.89
RRP1YDR087C SNX4P47057 423 aa3.26□□□□□ -1.89
RRP1YDR087C TOS8P53147 276 aa3.26□□□□□ -1.89
RRP1YDR087C EMC6Q12431 108 aa3.26□□□□□ -1.89
RRP1YDR087C NUM1Q00402 2748 aa3.25□□□□□ -1.89
RRP1YDR087C VPS21P36017 210 aaKnown RBP3.25□□□□□ -1.89
RRP1YDR087C YOR062CP36025 268 aa3.25□□□□□ -1.89
RRP1YDR087C GRE3P38715 327 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
RRP1YDR087C YOR283WQ12040 230 aaKnown RBP3.25□□□□□ -1.89
RRP1YDR087C YPT52P36018 234 aaKnown RBP3.24□□□□□ -1.89
RRP1YDR087C FCY21P40039 528 aa3.24□□□□□ -1.89
RRP1YDR087C YMR144WP40214 342 aaKnown RBP3.24□□□□□ -1.89
RRP1YDR087C DCR2Q05924 578 aa3.24□□□□□ -1.89
RRP1YDR087C GEA1P47102 1408 aaPredicted RBP3.24□□□□□ -1.89
RRP1YDR087C VPS13Q07878 3144 aa3.24□□□□□ -1.89
RRP1YDR087C IPP1P00817 287 aaKnown RBP3.23□□□□□ -1.89
RRP1YDR087C RHO1P06780 209 aaKnown RBP3.23□□□□□ -1.89
RRP1YDR087C CAT8P39113 1433 aa3.23□□□□□ -1.89
RRP1YDR087C TRM9P49957 279 aa3.23□□□□□ -1.89
RRP1YDR087C RMR1P53060 241 aa3.23□□□□□ -1.89
RRP1YDR087C RRP5Q05022 1729 aaKnown RBP3.23□□□□□ -1.89
RRP1YDR087C YPL257WQ08974 193 aa3.23□□□□□ -1.89
RRP1YDR087C BCY1P07278 416 aaKnown RBP3.22□□□□□ -1.89
RRP1YDR087C DSF1P0CX08 502 aa3.22□□□□□ -1.89
RRP1YDR087C YNR073CP0CX09 502 aa3.22□□□□□ -1.89
RRP1YDR087C CUE1P38428 203 aa3.22□□□□□ -1.89
RRP1YDR087C CAT5P41735 233 aa3.22□□□□□ -1.89
RRP1YDR087C MCM22P47167 239 aa3.22□□□□□ -1.89
RRP1YDR087C YMR279CQ03263 540 aa3.22□□□□□ -1.89
RRP1YDR087C NIP7Q08962 181 aaKnown RBP3.22□□□□□ -1.89
RRP1YDR087C AKR2Q12013 749 aa3.22□□□□□ -1.89
RRP1YDR087C HTL1Q9URQ5 78 aa3.22□□□□□ -1.89
RRP1YDR087C YPR117WQ06116 2489 aa3.21□□□□□ -1.89
RRP1YDR087C CDC10P25342 322 aaKnown RBP3.21□□□□□ -1.9
RRP1YDR087C RPF1P38805 295 aaKnown RBP3.21□□□□□ -1.9
RRP1YDR087C YJL027CP47063 138 aaPredicted RBP3.21□□□□□ -1.9
RRP1YDR087C SIR4P11978 1358 aa3.21□□□□□ -1.9
RRP1YDR087C URB1P34241 1764 aaKnown RBP3.2□□□□□ -1.9
RRP1YDR087C DOA4P32571 926 aa3.2□□□□□ -1.9
RRP1YDR087C URA8P38627 578 aaPredicted RBP3.2□□□□□ -1.9
RRP1YDR087C RTR1P40084 226 aaPredicted RBP3.2□□□□□ -1.9
RRP1YDR087C PEX17P40155 199 aa3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms