RNA–Protein interactions for RNA: YPL200W

CSM4, Transcript of Protein required for accurate chromosome segregation during meiosis, yeastyeast

Gene CSM4, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM4YPL200W YDR209CQ03480 137 aa1.34□□□□□ -2.19
CSM4YPL200W YPR172WQ06608 200 aa1.34□□□□□ -2.19
CSM4YPL200W MSF1P08425 469 aa1.33□□□□□ -2.2
CSM4YPL200W BIG1P38813 335 aa1.33□□□□□ -2.2
CSM4YPL200W ERG25P53045 309 aa1.33□□□□□ -2.2
CSM4YPL200W USE1P53146 245 aa1.33□□□□□ -2.2
CSM4YPL200W YNL046WP53956 172 aa1.33□□□□□ -2.2
CSM4YPL200W DCN1Q12395 269 aa1.33□□□□□ -2.2
CSM4YPL200W YOL162WP0CF19 215 aa1.32□□□□□ -2.2
CSM4YPL200W MDH2P22133 377 aa1.32□□□□□ -2.2
CSM4YPL200W OAC1P32332 324 aa1.32□□□□□ -2.2
CSM4YPL200W ERV15P38312 142 aa1.32□□□□□ -2.2
CSM4YPL200W DSE2P38844 325 aa1.32□□□□□ -2.2
CSM4YPL200W FIS1P40515 155 aa1.32□□□□□ -2.2
CSM4YPL200W YKE4P40544 346 aa1.32□□□□□ -2.2
CSM4YPL200W RMR1P53060 241 aa1.32□□□□□ -2.2
CSM4YPL200W NEJ1Q06148 342 aa1.32□□□□□ -2.2
CSM4YPL200W ARR2Q06597 130 aa1.32□□□□□ -2.2
CSM4YPL200W SDO1Q07953 250 aaKnown RBP1.32□□□□□ -2.2
CSM4YPL200W RRS1Q08746 203 aaKnown RBP1.32□□□□□ -2.2
CSM4YPL200W YPL257WQ08974 193 aa1.32□□□□□ -2.2
CSM4YPL200W MSW1P04803 379 aa1.31□□□□□ -2.2
CSM4YPL200W RPL9AP05738 191 aaKnown RBP1.31□□□□□ -2.2
CSM4YPL200W GRX2P17695 143 aaKnown RBP1.31□□□□□ -2.2
CSM4YPL200W RNA15P25299 296 aaPredicted RBP1.31□□□□□ -2.2
CSM4YPL200W YPT52P36018 234 aaKnown RBP1.31□□□□□ -2.2
CSM4YPL200W YKR045CP36138 183 aa1.31□□□□□ -2.2
CSM4YPL200W YHR180WP38868 163 aa1.31□□□□□ -2.2
CSM4YPL200W RPL9BP51401 191 aaKnown RBP1.31□□□□□ -2.2
CSM4YPL200W MPP6P53725 186 aaPredicted RBP1.31□□□□□ -2.2
CSM4YPL200W ATG39Q06159 398 aa1.31□□□□□ -2.2
CSM4YPL200W IPP1P00817 287 aaKnown RBP1.3□□□□□ -2.2
CSM4YPL200W SNA3P14359 133 aa1.3□□□□□ -2.2
CSM4YPL200W YBR219CP38317 127 aa1.3□□□□□ -2.2
CSM4YPL200W VTC1P40046 129 aaRIP-Chip data1.3□□□□□ -2.2not detected
CSM4YPL200W RTT105P40063 208 aa1.3□□□□□ -2.2
CSM4YPL200W GLE2P40066 365 aa1.3□□□□□ -2.2
CSM4YPL200W RPA43P46669 326 aa1.3□□□□□ -2.2
CSM4YPL200W HEM25Q07534 307 aa1.3□□□□□ -2.2
CSM4YPL200W USB1Q12208 290 aaKnown RBP1.3□□□□□ -2.2
CSM4YPL200W YCT1Q12235 531 aa1.3□□□□□ -2.2
CSM4YPL200W YPL229WQ99395 206 aa1.3□□□□□ -2.2
CSM4YPL200W HTL1Q9URQ5 78 aa1.3□□□□□ -2.2
CSM4YPL200W RPS5P26783 225 aaKnown RBP1.29□□□□□ -2.2
CSM4YPL200W BFR1P38934 470 aaKnown RBP RIP-Chip data1.29□□□□□ -2.2not detected
CSM4YPL200W RHO3Q00245 231 aaKnown RBP1.29□□□□□ -2.2
CSM4YPL200W MSA1Q08471 629 aa1.29□□□□□ -2.2
CSM4YPL200W CSM4Q08955 156 aa1.29□□□□□ -2.2
CSM4YPL200W BTS1Q12051 335 aa1.29□□□□□ -2.2
CSM4YPL200W ERD2P18414 219 aa1.28□□□□□ -2.2
CSM4YPL200W YGL010WP25338 174 aa1.28□□□□□ -2.2
CSM4YPL200W RPF1P38805 295 aaKnown RBP1.28□□□□□ -2.2
CSM4YPL200W YHR127WP38833 243 aaKnown RBP1.28□□□□□ -2.2
CSM4YPL200W AVT2P39981 480 aa1.28□□□□□ -2.2
CSM4YPL200W YIL001WP40560 513 aa1.28□□□□□ -2.2
CSM4YPL200W NUP49Q02199 472 aa1.28□□□□□ -2.2
CSM4YPL200W NIP7Q08962 181 aaKnown RBP1.28□□□□□ -2.2
CSM4YPL200W SNU23Q12368 194 aaPredicted RBP1.28□□□□□ -2.2
CSM4YPL200W YKL075CP36083 450 aa1.27□□□□□ -2.21
CSM4YPL200W ECM33P38248 429 aaKnown RBP1.27□□□□□ -2.21
CSM4YPL200W AGE2P40529 298 aa1.27□□□□□ -2.21
CSM4YPL200W YJR056CP47115 236 aa1.27□□□□□ -2.21
CSM4YPL200W JHD2P47156 728 aaPredicted RBP1.27□□□□□ -2.21
CSM4YPL200W YNR062CP53748 327 aa1.27□□□□□ -2.21
CSM4YPL200W BUD25P85052 153 aa1.27□□□□□ -2.21
CSM4YPL200W SEI1Q06058 285 aa1.27□□□□□ -2.21
CSM4YPL200W KAP95Q06142 861 aaKnown RBP1.27□□□□□ -2.21
CSM4YPL200W CSI2Q08054 341 aa1.27□□□□□ -2.21
CSM4YPL200W MSH5Q12175 901 aa1.27□□□□□ -2.21
CSM4YPL200W RRP36Q12481 300 aaPredicted RBP1.27□□□□□ -2.21
CSM4YPL200W PET9P18239 318 aaKnown RBP1.26□□□□□ -2.21
CSM4YPL200W RIB7P33312 244 aa1.26□□□□□ -2.21
CSM4YPL200W YBR220CP38318 560 aa1.26□□□□□ -2.21
CSM4YPL200W YAR068WP39564 161 aa1.26□□□□□ -2.21
CSM4YPL200W CAT5P41735 233 aa1.26□□□□□ -2.21
CSM4YPL200W YJR079WP47126 109 aa1.26□□□□□ -2.21
CSM4YPL200W SML1Q04964 104 aa1.26□□□□□ -2.21
CSM4YPL200W YOL107WQ12239 342 aa1.26□□□□□ -2.21
CSM4YPL200W YOR029WQ12243 111 aa1.26□□□□□ -2.21
CSM4YPL200W YHR139C-AO13536 103 aa1.25□□□□□ -2.21
CSM4YPL200W TCP1P12612 559 aaKnown RBP1.25□□□□□ -2.21
CSM4YPL200W RSR1P13856 272 aa1.25□□□□□ -2.21
CSM4YPL200W FCY2P17064 533 aa1.25□□□□□ -2.21
CSM4YPL200W RPT5P33297 434 aaKnown RBP1.25□□□□□ -2.21
CSM4YPL200W SVP26P38869 228 aa1.25□□□□□ -2.21
CSM4YPL200W TOS8P53147 276 aa1.25□□□□□ -2.21
CSM4YPL200W YLR162WQ06235 118 aa1.25□□□□□ -2.21
CSM4YPL200W TPO4Q12256 659 aa1.25□□□□□ -2.21
CSM4YPL200W YOR020W-AQ3E824 90 aa1.25□□□□□ -2.21
CSM4YPL200W RPL2AP0CX45 254 aaKnown RBP1.24□□□□□ -2.21
CSM4YPL200W RPL2BP0CX46 254 aaKnown RBP1.24□□□□□ -2.21
CSM4YPL200W GPI8P49018 411 aa1.24□□□□□ -2.21
CSM4YPL200W FPR1P20081 114 aaKnown RBP1.23□□□□□ -2.21
CSM4YPL200W YBR063CP38083 404 aa1.23□□□□□ -2.21
CSM4YPL200W YMR144WP40214 342 aaKnown RBP1.23□□□□□ -2.21
CSM4YPL200W HAM1P47119 197 aaKnown RBP1.23□□□□□ -2.21
CSM4YPL200W HOC1P47124 396 aa1.23□□□□□ -2.21
CSM4YPL200W MZM1Q03429 123 aaPredicted RBP1.23□□□□□ -2.21
CSM4YPL200W YLR126CQ12288 251 aa1.23□□□□□ -2.21
CSM4YPL200W FLO9P39712 1322 aa1.22□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 68.5 ms