RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W ERJ5P43613 295 aaPredicted RBP3.36□□□□□ -1.87
USA1YML029W ARO8P53090 500 aaKnown RBP3.36□□□□□ -1.87
USA1YML029W AAH1P53909 347 aa3.36□□□□□ -1.87
USA1YML029W YDC1Q02896 317 aa3.36□□□□□ -1.87
USA1YML029W TPO3Q06451 622 aa3.36□□□□□ -1.87
USA1YML029W SSK1Q07084 712 aa3.36□□□□□ -1.87
USA1YML029W MRX9Q07349 420 aaKnown RBP3.36□□□□□ -1.87
USA1YML029W SRL2Q12020 392 aa3.36□□□□□ -1.87
USA1YML029W YOR283WQ12040 230 aaKnown RBP3.36□□□□□ -1.87
USA1YML029W SCM3Q12334 223 aa3.36□□□□□ -1.87
USA1YML029W FOL3Q12676 427 aaPredicted RBP3.36□□□□□ -1.87
USA1YML029W TDH2P00358 332 aaKnown RBP3.36□□□□□ -1.87
USA1YML029W YML003WP0CF16 290 aa3.36□□□□□ -1.87
USA1YML029W RFA3P26755 122 aaKnown RBP3.36□□□□□ -1.87
USA1YML029W MSS1P32559 526 aaPredicted RBP3.36□□□□□ -1.87
USA1YML029W YHL044WP38727 235 aa3.36□□□□□ -1.87
USA1YML029W MSS4P38994 779 aa3.36□□□□□ -1.87
USA1YML029W PIG2P40187 538 aa3.36□□□□□ -1.87
USA1YML029W PRM5P40476 318 aa3.36□□□□□ -1.87
USA1YML029W YIL029CP40538 142 aa3.36□□□□□ -1.87
USA1YML029W TIR3P40552 269 aa3.36□□□□□ -1.87
USA1YML029W AGX1P43567 385 aa3.36□□□□□ -1.87
USA1YML029W LOC1P43586 204 aaPredicted RBP3.36□□□□□ -1.87
USA1YML029W LSM1P47017 172 aaKnown RBP3.36□□□□□ -1.87
USA1YML029W YGR045CP53229 120 aa3.36□□□□□ -1.87
USA1YML029W ASR1Q06834 288 aa3.36□□□□□ -1.87
USA1YML029W YPL199CQ08954 240 aa3.36□□□□□ -1.87
USA1YML029W MCT1Q12283 360 aa3.36□□□□□ -1.87
USA1YML029W MES1P00958 751 aaKnown RBP3.35□□□□□ -1.87
USA1YML029W SGA1P08019 549 aa3.35□□□□□ -1.87
USA1YML029W PDA1P16387 420 aaKnown RBP3.35□□□□□ -1.87
USA1YML029W IFM1P25038 676 aa3.35□□□□□ -1.87
USA1YML029W SNC2P33328 115 aa3.35□□□□□ -1.87
USA1YML029W PPZ2P33329 710 aa3.35□□□□□ -1.87
USA1YML029W MRPS5P33759 307 aa3.35□□□□□ -1.87
USA1YML029W AIR1P40507 360 aaKnown RBP3.35□□□□□ -1.87
USA1YML029W CTK2P46962 323 aa3.35□□□□□ -1.87
USA1YML029W BNA2P47125 453 aa3.35□□□□□ -1.87
USA1YML029W SBH2P52871 88 aa3.35□□□□□ -1.87
USA1YML029W TPN1P53099 579 aa3.35□□□□□ -1.87
USA1YML029W POP6P53218 158 aa3.35□□□□□ -1.87
USA1YML029W THI72Q08579 599 aa3.35□□□□□ -1.87
USA1YML029W FSH3Q99369 266 aa3.35□□□□□ -1.87
USA1YML029W CYC1P00044 109 aaPredicted RBP3.35□□□□□ -1.87
USA1YML029W RPL30P14120 105 aaKnown RBP3.35□□□□□ -1.87
USA1YML029W CNE1P27825 502 aa3.35□□□□□ -1.87
USA1YML029W PRE4P30657 266 aa3.35□□□□□ -1.87
USA1YML029W HYM1P32464 399 aa3.35□□□□□ -1.87
USA1YML029W RIB7P33312 244 aa3.35□□□□□ -1.87
USA1YML029W MIA40P36046 403 aa3.35□□□□□ -1.87
USA1YML029W TCM62P38228 572 aaKnown RBP3.35□□□□□ -1.87
USA1YML029W OSH7P38755 437 aa3.35□□□□□ -1.87
USA1YML029W HTD2P38790 280 aaKnown RBP3.35□□□□□ -1.87
USA1YML029W LNP1P38878 278 aa3.35□□□□□ -1.87
USA1YML029W HPA3P39979 161 aa3.35□□□□□ -1.87
USA1YML029W YIP4P53093 235 aa3.35□□□□□ -1.87
USA1YML029W GIM3P53900 129 aa3.35□□□□□ -1.87
USA1YML029W YPL067CQ02754 198 aa3.35□□□□□ -1.87
USA1YML029W MRP51Q02950 344 aa3.35□□□□□ -1.87
USA1YML029W GMC1Q04399 608 aa3.35□□□□□ -1.87
USA1YML029W ECM18Q04623 453 aa3.35□□□□□ -1.87
USA1YML029W YMR254CQ04838 102 aa3.35□□□□□ -1.87
USA1YML029W FIT3Q08907 204 aa3.35□□□□□ -1.87
USA1YML029W ORT1Q12375 292 aa3.35□□□□□ -1.87
USA1YML029W SED4P25365 1065 aa3.34□□□□□ -1.87
USA1YML029W MTR2P34232 184 aaKnown RBP3.34□□□□□ -1.87
USA1YML029W SSH1P38353 490 aaKnown RBP3.34□□□□□ -1.87
USA1YML029W EGT2P42835 1041 aa3.34□□□□□ -1.87
USA1YML029W ABM1P47146 123 aa3.34□□□□□ -1.87
USA1YML029W LSM7P53905 115 aaKnown RBP3.34□□□□□ -1.87
USA1YML029W YMR279CQ03263 540 aa3.34□□□□□ -1.87
USA1YML029W HEM25Q07534 307 aa3.34□□□□□ -1.87
USA1YML029W INP53Q12271 1107 aa3.34□□□□□ -1.87
USA1YML029W COX5BP00425 151 aa3.34□□□□□ -1.88
USA1YML029W PCL1P24867 279 aa3.34□□□□□ -1.88
USA1YML029W MRPL36P36531 177 aa3.34□□□□□ -1.88
USA1YML029W MSE1P48525 536 aa3.34□□□□□ -1.88
USA1YML029W YGL159WP53110 370 aa3.34□□□□□ -1.88
USA1YML029W NSA1P53136 463 aaPredicted RBP3.34□□□□□ -1.88
USA1YML029W PHO92Q06390 306 aa3.34□□□□□ -1.88
USA1YML029W PET54P10834 293 aa3.33□□□□□ -1.88
USA1YML029W ERS1P17261 260 aa3.33□□□□□ -1.88
USA1YML029W MNS1P32906 549 aa3.33□□□□□ -1.88
USA1YML029W CCS1P40202 249 aaKnown RBP3.33□□□□□ -1.88
USA1YML029W YKE4P40544 346 aa3.33□□□□□ -1.88
USA1YML029W XPT1P47165 209 aa3.33□□□□□ -1.88
USA1YML029W AVT4P50944 713 aa3.33□□□□□ -1.88
USA1YML029W VHT1P53241 593 aa3.33□□□□□ -1.88
USA1YML029W PXR1P53335 271 aaPredicted RBP3.33□□□□□ -1.88
USA1YML029W YDR248CQ03786 193 aa3.33□□□□□ -1.88
USA1YML029W KEI1Q06346 221 aa3.33□□□□□ -1.88
USA1YML029W GPM1P00950 247 aaKnown RBP3.33□□□□□ -1.88
USA1YML029W PET18P25362 215 aa3.33□□□□□ -1.88
USA1YML029W BUD23P25627 275 aaPredicted RBP3.33□□□□□ -1.88
USA1YML029W PEX4P29340 183 aa3.33□□□□□ -1.88
USA1YML029W YOX1P34161 385 aa3.33□□□□□ -1.88
USA1YML029W BUD8P41698 603 aa3.33□□□□□ -1.88
USA1YML029W CAT5P41735 233 aa3.33□□□□□ -1.88
USA1YML029W YFL051CP43552 160 aa3.33□□□□□ -1.88
USA1YML029W GNA1P43577 159 aaPredicted RBP3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms