RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C GOT1Q03554 138 aa2.91□□□□□ -1.94
VPS33YLR396C PBA1Q05778 276 aa2.91□□□□□ -1.94
VPS33YLR396C YLR456WQ06199 204 aa2.91□□□□□ -1.94
VPS33YLR396C DCI1Q08558 271 aa2.91□□□□□ -1.94
VPS33YLR396C YOR387CQ08910 206 aa2.91□□□□□ -1.94
VPS33YLR396C GPM2Q12008 311 aa2.91□□□□□ -1.94
VPS33YLR396C SRL2Q12020 392 aa2.91□□□□□ -1.94
VPS33YLR396C YPR014CQ6B0W2 109 aa2.91□□□□□ -1.94
VPS33YLR396C LAA1P39526 2014 aa2.91□□□□□ -1.94
VPS33YLR396C CDC28P00546 298 aaKnown RBP2.91□□□□□ -1.94
VPS33YLR396C PET9P18239 318 aaKnown RBP2.91□□□□□ -1.94
VPS33YLR396C POF1P25576 258 aa2.91□□□□□ -1.94
VPS33YLR396C OAC1P32332 324 aa2.91□□□□□ -1.94
VPS33YLR396C DTR1P38125 572 aa2.91□□□□□ -1.94
VPS33YLR396C BMT2P38278 337 aa2.91□□□□□ -1.94
VPS33YLR396C MTC6P38849 526 aa2.91□□□□□ -1.94
VPS33YLR396C AIM10P39965 576 aaKnown RBP2.91□□□□□ -1.94
VPS33YLR396C GAT2P40209 560 aa2.91□□□□□ -1.94
VPS33YLR396C POG1P40473 351 aa2.91□□□□□ -1.94
VPS33YLR396C AGX1P43567 385 aa2.91□□□□□ -1.94
VPS33YLR396C DAN1P47178 298 aa2.91□□□□□ -1.94
VPS33YLR396C GTO1P48239 356 aa2.91□□□□□ -1.94
VPS33YLR396C BOL2P53082 120 aa2.91□□□□□ -1.94
VPS33YLR396C YGL185CP53100 379 aa2.91□□□□□ -1.94
VPS33YLR396C YNL146WP53906 100 aa2.91□□□□□ -1.94
VPS33YLR396C DCR2Q05924 578 aa2.91□□□□□ -1.94
VPS33YLR396C YLR446WQ06204 433 aa2.91□□□□□ -1.94
VPS33YLR396C YLR173WQ06247 608 aa2.91□□□□□ -1.94
VPS33YLR396C ATG41Q12048 136 aa2.91□□□□□ -1.94
VPS33YLR396C RDI1Q12434 202 aa2.91□□□□□ -1.94
VPS33YLR396C SFG1Q12507 346 aa2.91□□□□□ -1.94
VPS33YLR396C EFG1Q3E705 233 aaKnown RBP2.91□□□□□ -1.94
VPS33YLR396C MATALPHA1P0CY06 175 aa2.9□□□□□ -1.95
VPS33YLR396C HMLALPHA1P0CY07 175 aa2.9□□□□□ -1.95
VPS33YLR396C RPL4AP10664 362 aaKnown RBP2.9□□□□□ -1.95
VPS33YLR396C UNG1P12887 359 aa2.9□□□□□ -1.95
VPS33YLR396C SEC22P22214 214 aa2.9□□□□□ -1.95
VPS33YLR396C RSA4P25382 515 aaKnown RBP2.9□□□□□ -1.95
VPS33YLR396C KRE6P32486 720 aa2.9□□□□□ -1.95
VPS33YLR396C VPH1P32563 840 aaKnown RBP2.9□□□□□ -1.95
VPS33YLR396C MSN4P33749 630 aa2.9□□□□□ -1.95
VPS33YLR396C YBL059WP34224 193 aa2.9□□□□□ -1.95
VPS33YLR396C TVP38P36164 337 aa2.9□□□□□ -1.95
VPS33YLR396C MRPL15P36523 253 aa2.9□□□□□ -1.95
VPS33YLR396C SDH4P37298 181 aa2.9□□□□□ -1.95
VPS33YLR396C MRP21P38175 177 aa2.9□□□□□ -1.95
VPS33YLR396C YHR035WP38769 630 aa2.9□□□□□ -1.95
VPS33YLR396C GCV3P39726 170 aaPredicted RBP2.9□□□□□ -1.95
VPS33YLR396C PRM5P40476 318 aa2.9□□□□□ -1.95
VPS33YLR396C BMT5P40493 336 aa2.9□□□□□ -1.95
VPS33YLR396C VMA21P41806 77 aa2.9□□□□□ -1.95
VPS33YLR396C PAM16P42949 149 aa2.9□□□□□ -1.95
VPS33YLR396C NCA3P46955 337 aa2.9□□□□□ -1.95
VPS33YLR396C YHC3P47040 408 aa2.9□□□□□ -1.95
VPS33YLR396C AIM25P47140 327 aa2.9□□□□□ -1.95
VPS33YLR396C YJR111CP47148 283 aaKnown RBP2.9□□□□□ -1.95
VPS33YLR396C RPL4BP49626 362 aaKnown RBP2.9□□□□□ -1.95
VPS33YLR396C VOA1P53262 265 aa2.9□□□□□ -1.95
VPS33YLR396C IGO1P53897 168 aa2.9□□□□□ -1.95
VPS33YLR396C OST6Q03723 332 aa2.9□□□□□ -1.95
VPS33YLR396C SHS1Q07657 551 aa2.9□□□□□ -1.95
VPS33YLR396C REX3Q12090 404 aa2.9□□□□□ -1.95
VPS33YLR396C MHT1Q12525 324 aa2.9□□□□□ -1.95
VPS33YLR396C PRB1P09232 635 aa2.89□□□□□ -1.95
VPS33YLR396C ASP3-2P0CX77 362 aa2.89□□□□□ -1.95
VPS33YLR396C ASP3-3P0CX78 362 aa2.89□□□□□ -1.95
VPS33YLR396C ASP3-4P0CX79 362 aa2.89□□□□□ -1.95
VPS33YLR396C ASP3-1P0CZ17 362 aa2.89□□□□□ -1.95
VPS33YLR396C TFS1P14306 219 aa2.89□□□□□ -1.95
VPS33YLR396C FUN14P18411 198 aa2.89□□□□□ -1.95
VPS33YLR396C ZRC1P20107 442 aa2.89□□□□□ -1.95
VPS33YLR396C MIR1P23641 311 aaKnown RBP2.89□□□□□ -1.95
VPS33YLR396C YBR063CP38083 404 aa2.89□□□□□ -1.95
VPS33YLR396C YEL028WP39989 153 aa2.89□□□□□ -1.95
VPS33YLR396C VAB2P40003 282 aa2.89□□□□□ -1.95
VPS33YLR396C FMC1P40491 155 aa2.89□□□□□ -1.95
VPS33YLR396C REE1P40893 198 aa2.89□□□□□ -1.95
VPS33YLR396C PFS2P42841 465 aaKnown RBP2.89□□□□□ -1.95
VPS33YLR396C WWM1P43582 211 aaKnown RBP2.89□□□□□ -1.95
VPS33YLR396C LOH1P47055 219 aa2.89□□□□□ -1.95
VPS33YLR396C PAC10P48363 199 aa2.89□□□□□ -1.95
VPS33YLR396C FMP41P53889 259 aaKnown RBP2.89□□□□□ -1.95
VPS33YLR396C CDC14Q00684 551 aa2.89□□□□□ -1.95
VPS33YLR396C TMS1Q12116 473 aa2.89□□□□□ -1.95
VPS33YLR396C TIR4Q12218 487 aaPredicted RBP2.89□□□□□ -1.95
VPS33YLR396C MRX4Q12467 430 aa2.89□□□□□ -1.95
VPS33YLR396C HHF1P02309 103 aaKnown RBP2.89□□□□□ -1.95
VPS33YLR396C CDC7P06243 507 aa2.89□□□□□ -1.95
VPS33YLR396C DEG1P31115 442 aaKnown RBP2.89□□□□□ -1.95
VPS33YLR396C NRP1P32770 719 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
VPS33YLR396C MRPL28P36527 147 aa2.89□□□□□ -1.95
VPS33YLR396C PHO88P38264 188 aaPredicted RBP2.89□□□□□ -1.95
VPS33YLR396C RTC2P38279 296 aa2.89□□□□□ -1.95
VPS33YLR396C UFE1P41834 346 aa2.89□□□□□ -1.95
VPS33YLR396C SAY1P53324 424 aa2.89□□□□□ -1.95
VPS33YLR396C TPS1Q00764 495 aaKnown RBP2.89□□□□□ -1.95
VPS33YLR396C COX5AP00424 153 aa2.88□□□□□ -1.95
VPS33YLR396C YOL163WP0CF20 169 aa2.88□□□□□ -1.95
VPS33YLR396C PRE7P23724 241 aaKnown RBP2.88□□□□□ -1.95
VPS33YLR396C RRP7P25368 297 aaPredicted RBP2.88□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms