RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR42, Length 351 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR42snR42 VCX1Q99385 411 aa2.71□□□□□ -1.98
snR42snR42 YLR415CO13578 112 aa2.7□□□□□ -1.98
snR42snR42 MES1P00958 751 aaKnown RBP2.7□□□□□ -1.98
snR42snR42 RPL39P04650 51 aa2.7□□□□□ -1.98
snR42snR42 DBF2P22204 572 aa2.7□□□□□ -1.98
snR42snR42 RPB9P27999 122 aa2.7□□□□□ -1.98
snR42snR42 FUN19P28003 413 aaPredicted RBP2.7□□□□□ -1.98
snR42snR42 NDC1P32500 655 aa2.7□□□□□ -1.98
snR42snR42 MTC2P34246 357 aa2.7□□□□□ -1.98
snR42snR42 FRM2P37261 193 aa2.7□□□□□ -1.98
snR42snR42 SHE1P38200 338 aa2.7□□□□□ -1.98
snR42snR42 FAT1P38225 669 aa2.7□□□□□ -1.98
snR42snR42 DLS1P40366 167 aa2.7□□□□□ -1.98
snR42snR42 ABM1P47146 123 aa2.7□□□□□ -1.98
snR42snR42 MTL1P53214 551 aa2.7□□□□□ -1.98
snR42snR42 SMM1P53720 384 aaKnown RBP2.7□□□□□ -1.98
snR42snR42 YNR048WP53740 393 aa2.7□□□□□ -1.98
snR42snR42 YNL046WP53956 172 aa2.7□□□□□ -1.98
snR42snR42 SAM50P53969 484 aa2.7□□□□□ -1.98
snR42snR42 GRX5Q02784 150 aa2.7□□□□□ -1.98
snR42snR42 YDC1Q02896 317 aa2.7□□□□□ -1.98
snR42snR42 YMR099CQ03161 297 aaKnown RBP2.7□□□□□ -1.98
snR42snR42 YDR391CQ04170 232 aa2.7□□□□□ -1.98
snR42snR42 YMR087WQ04299 284 aa2.7□□□□□ -1.98
snR42snR42 GAL83Q04739 417 aa2.7□□□□□ -1.98
snR42snR42 YLR345WQ06137 509 aa2.7□□□□□ -1.98
snR42snR42 GAT3Q07928 141 aa2.7□□□□□ -1.98
snR42snR42 SIA1Q12212 622 aa2.7□□□□□ -1.98
snR42snR42 RDL1Q12305 139 aaKnown RBP2.7□□□□□ -1.98
snR42snR42 ERP4Q12450 207 aa2.7□□□□□ -1.98
snR42snR42 TMA17Q12513 150 aa2.7□□□□□ -1.98
snR42snR42 YCL048W-AQ2V2Q2 79 aa2.7□□□□□ -1.98
snR42snR42 RPL30P14120 105 aaKnown RBP2.69□□□□□ -1.98
snR42snR42 MRPS28P21771 286 aa2.69□□□□□ -1.98
snR42snR42 RPA135P22138 1203 aaKnown RBP2.69□□□□□ -1.98
snR42snR42 PUT3P25502 979 aaPredicted RBP2.69□□□□□ -1.98
snR42snR42 PCL2P25693 308 aa2.69□□□□□ -1.98
snR42snR42 RPS5P26783 225 aaKnown RBP2.69□□□□□ -1.98
snR42snR42 DEG1P31115 442 aaKnown RBP2.69□□□□□ -1.98
snR42snR42 ECT1P33412 323 aa2.69□□□□□ -1.98
snR42snR42 PEX32P38292 413 aa2.69□□□□□ -1.98
snR42snR42 CTR2P38865 189 aa2.69□□□□□ -1.98
snR42snR42 PUG1P40100 303 aa2.69□□□□□ -1.98
snR42snR42 YER188WP40103 239 aa2.69□□□□□ -1.98
snR42snR42 SGN1P40561 250 aaKnown RBP RIP-Chip data2.69□□□□□ -1.98not detected
snR42snR42 OST1P41543 476 aaKnown RBP2.69□□□□□ -1.98
snR42snR42 GLR1P41921 483 aaKnown RBP2.69□□□□□ -1.98
snR42snR42 CTK2P46962 323 aa2.69□□□□□ -1.98
snR42snR42 CCC1P47818 322 aa2.69□□□□□ -1.98
snR42snR42 YIP4P53093 235 aa2.69□□□□□ -1.98
snR42snR42 GPG1P53130 126 aa2.69□□□□□ -1.98
snR42snR42 YNR064CP53750 290 aa2.69□□□□□ -1.98
snR42snR42 DUG3P53871 357 aa2.69□□□□□ -1.98
snR42snR42 AAH1P53909 347 aa2.69□□□□□ -1.98
snR42snR42 YDR248CQ03786 193 aa2.69□□□□□ -1.98
snR42snR42 RNH1Q04740 348 aa2.69□□□□□ -1.98
snR42snR42 YPR098CQ06089 161 aa2.69□□□□□ -1.98
snR42snR42 SSK1Q07084 712 aa2.69□□□□□ -1.98
snR42snR42 GSH2Q08220 491 aa2.69□□□□□ -1.98
snR42snR42 FCY22Q12119 530 aa2.69□□□□□ -1.98
snR42snR42 YPR1Q12458 312 aa2.69□□□□□ -1.98
snR42snR42 TDH2P00358 332 aaKnown RBP2.68□□□□□ -1.98
snR42snR42 FUN26P31381 517 aa2.68□□□□□ -1.98
snR42snR42 NAT2P37293 288 aa2.68□□□□□ -1.98
snR42snR42 TCM62P38228 572 aaKnown RBP2.68□□□□□ -1.98
snR42snR42 ARC40P38328 384 aaKnown RBP2.68□□□□□ -1.98
snR42snR42 SSH1P38353 490 aaKnown RBP2.68□□□□□ -1.98
snR42snR42 YLF2P38746 405 aa2.68□□□□□ -1.98
snR42snR42 EGD2P38879 174 aaKnown RBP2.68□□□□□ -1.98
snR42snR42 PDS1P40316 373 aaPredicted RBP2.68□□□□□ -1.98
snR42snR42 SLM1P40485 686 aa2.68□□□□□ -1.98
snR42snR42 MSS2P40990 351 aa2.68□□□□□ -1.98
snR42snR42 AVT4P50944 713 aa2.68□□□□□ -1.98
snR42snR42 SLD3P53135 668 aa2.68□□□□□ -1.98
snR42snR42 PEF1P53238 335 aa2.68□□□□□ -1.98
snR42snR42 RNH201P53942 307 aa2.68□□□□□ -1.98
snR42snR42 YLR152CP54072 576 aa2.68□□□□□ -1.98
snR42snR42 ARG5,6Q01217 863 aa2.68□□□□□ -1.98
snR42snR42 YKR005CQ02203 525 aa2.68□□□□□ -1.98
snR42snR42 TLG1Q03322 224 aa2.68□□□□□ -1.98
snR42snR42 RIM9Q04734 239 aa2.68□□□□□ -1.98
snR42snR42 YLR283WQ05867 314 aa2.68□□□□□ -1.98
snR42snR42 TSR2Q06672 205 aaKnown RBP2.68□□□□□ -1.98
snR42snR42 LUC7Q07508 261 aaPredicted RBP2.68□□□□□ -1.98
snR42snR42 MEU1Q07938 337 aaKnown RBP RIP-Chip data2.68□□□□□ -1.98not detected
snR42snR42 RFU1Q08003 200 aa2.68□□□□□ -1.98
snR42snR42 FRE3Q08905 711 aa2.68□□□□□ -1.98
snR42snR42 ENV7Q12003 364 aa2.68□□□□□ -1.98
snR42snR42 YDL009CQ12210 107 aa2.68□□□□□ -1.98
snR42snR42 YGK3Q12222 375 aaPredicted RBP2.68□□□□□ -1.98
snR42snR42 ISA2Q12425 185 aa2.68□□□□□ -1.98
snR42snR42 REP2P03872 296 aa2.67□□□□□ -1.98
snR42snR42 RPL25P04456 142 aaKnown RBP2.67□□□□□ -1.98
snR42snR42 RPL15AP05748 204 aaKnown RBP2.67□□□□□ -1.98
snR42snR42 MET17P06106 444 aa2.67□□□□□ -1.98
snR42snR42 SGA1P08019 549 aa2.67□□□□□ -1.98
snR42snR42 APA2P22108 325 aa2.67□□□□□ -1.98
snR42snR42 AFG1P32317 509 aa2.67□□□□□ -1.98
snR42snR42 TCA17P32613 152 aa2.67□□□□□ -1.98
snR42snR42 YBL010CP32788 280 aa2.67□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms