RNA–Protein interactions for RNA: YNL311C

SKP2, Transcript of F-box protein of unknown function, yeast

Gene SKP2, Length 2,292 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	YNL311C	RPA135	P22138	1203 aa	Known RBP	2.24	□□□□□ -2.05
SKP2	YNL311C	MRPL17	P36528	281 aa		2.24	□□□□□ -2.05
SKP2	YNL311C	VBA2	P38358	474 aa	Known RBP	2.24	□□□□□ -2.05
SKP2	YNL311C	PUG1	P40100	303 aa		2.24	□□□□□ -2.05
SKP2	YNL311C	CTK2	P46962	323 aa		2.24	□□□□□ -2.05
SKP2	YNL311C	ERG25	P53045	309 aa		2.24	□□□□□ -2.05
SKP2	YNL311C	MRH4	P53166	561 aa		2.24	□□□□□ -2.05
SKP2	YNL311C	SPC19	Q03954	165 aa		2.24	□□□□□ -2.05
SKP2	YNL311C	RPL11B	Q3E757	174 aa	Predicted RBP	2.24	□□□□□ -2.05
SKP2	YNL311C	YLR358C	O13565	187 aa		2.23	□□□□□ -2.05
SKP2	YNL311C	ARG81	P05085	880 aa		2.23	□□□□□ -2.05
SKP2	YNL311C	DPM1	P14020	267 aa	Known RBP	2.23	□□□□□ -2.05
SKP2	YNL311C	CLB4	P24871	460 aa		2.23	□□□□□ -2.05
SKP2	YNL311C	RHB1	P25378	209 aa		2.23	□□□□□ -2.05
SKP2	YNL311C	RAD23	P32628	398 aa	Known RBP	2.23	□□□□□ -2.05
SKP2	YNL311C	MRE11	P32829	692 aa		2.23	□□□□□ -2.05
SKP2	YNL311C	SIT1	P39980	628 aa		2.23	□□□□□ -2.05
SKP2	YNL311C	MRPL49	P40858	161 aa	Predicted RBP	2.23	□□□□□ -2.05
SKP2	YNL311C	SFH5	P47008	294 aa		2.23	□□□□□ -2.05
SKP2	YNL311C	EFM3	P47163	339 aa		2.23	□□□□□ -2.05
SKP2	YNL311C	GPI8	P49018	411 aa		2.23	□□□□□ -2.05
SKP2	YNL311C	TOS8	P53147	276 aa		2.23	□□□□□ -2.05
SKP2	YNL311C	RRN5	Q02983	363 aa		2.23	□□□□□ -2.05
SKP2	YNL311C	YDR179W-A	Q03983	463 aa		2.23	□□□□□ -2.05
SKP2	YNL311C	RFM1	Q12192	310 aa		2.23	□□□□□ -2.05
SKP2	YNL311C	MES1	P00958	751 aa	Known RBP	2.22	□□□□□ -2.05
SKP2	YNL311C	RPC40	P07703	335 aa	Known RBP	2.22	□□□□□ -2.05
SKP2	YNL311C	NFT1	P0CE68	1218 aa		2.22	□□□□□ -2.05
SKP2	YNL311C	ARO4	P32449	370 aa	Known RBP	2.22	□□□□□ -2.05
SKP2	YNL311C	PMU1	P36069	295 aa		2.22	□□□□□ -2.05
SKP2	YNL311C	PHM8	P40025	321 aa		2.22	□□□□□ -2.05
SKP2	YNL311C	YGL101W	P53144	215 aa		2.22	□□□□□ -2.05
SKP2	YNL311C	NUP49	Q02199	472 aa		2.22	□□□□□ -2.05
SKP2	YNL311C	MDM36	Q06820	579 aa		2.22	□□□□□ -2.05
SKP2	YNL311C	YOL162W	P0CF19	215 aa		2.22	□□□□□ -2.05
SKP2	YNL311C	ILV6	P25605	309 aa	Known RBP	2.22	□□□□□ -2.05
SKP2	YNL311C	MRP20	P32387	263 aa		2.22	□□□□□ -2.05
SKP2	YNL311C	LIN1	P38852	340 aa	Predicted RBP	2.22	□□□□□ -2.05
SKP2	YNL311C	YNL194C	P40169	301 aa		2.22	□□□□□ -2.05
SKP2	YNL311C	TTI2	P47168	421 aa		2.22	□□□□□ -2.05
SKP2	YNL311C	RNH202	Q05635	350 aa		2.22	□□□□□ -2.05
SKP2	YNL311C	RDS3	Q06835	107 aa	Predicted RBP	2.22	□□□□□ -2.05
SKP2	YNL311C	SWT1	Q12104	458 aa		2.22	□□□□□ -2.05
SKP2	YNL311C	HBN1	Q96VH4	193 aa		2.22	□□□□□ -2.05
SKP2	YNL311C	CDC8	P00572	216 aa		2.21	□□□□□ -2.06
SKP2	YNL311C	TPK3	P05986	398 aa		2.21	□□□□□ -2.06
SKP2	YNL311C	YCR061W	P25639	631 aa		2.21	□□□□□ -2.06
SKP2	YNL311C	NAT2	P37293	288 aa		2.21	□□□□□ -2.06
SKP2	YNL311C	ECM33	P38248	429 aa	Known RBP	2.21	□□□□□ -2.06
SKP2	YNL311C	SBE22	P38814	852 aa		2.21	□□□□□ -2.06
SKP2	YNL311C	TDA10	P42938	290 aa		2.21	□□□□□ -2.06
SKP2	YNL311C	YGR210C	P42942	411 aa		2.21	□□□□□ -2.06
SKP2	YNL311C	RET2	P43621	546 aa		2.21	□□□□□ -2.06
SKP2	YNL311C	HMS2	P47175	358 aa		2.21	□□□□□ -2.06
SKP2	YNL311C	HNT2	P49775	206 aa		2.21	□□□□□ -2.06
SKP2	YNL311C	SAM50	P53969	484 aa		2.21	□□□□□ -2.06
SKP2	YNL311C	RGC1	Q06108	1083 aa	Known RBP	2.21	□□□□□ -2.06
SKP2	YNL311C	SKI7	Q08491	747 aa	Predicted RBP	2.21	□□□□□ -2.06
SKP2	YNL311C	OCH1	P31755	480 aa		2.21	□□□□□ -2.06
SKP2	YNL311C	SIP2	P34164	415 aa	Known RBP	2.21	□□□□□ -2.06
SKP2	YNL311C	LAS1	P36146	502 aa	Predicted RBP	2.21	□□□□□ -2.06
SKP2	YNL311C	NRG2	P38082	220 aa		2.21	□□□□□ -2.06
SKP2	YNL311C	SMX2	P40204	77 aa	Known RBP	2.21	□□□□□ -2.06
SKP2	YNL311C	SYG1	P40528	902 aa		2.21	□□□□□ -2.06
SKP2	YNL311C	COX12	Q01519	83 aa		2.21	□□□□□ -2.06
SKP2	YNL311C	YKR005C	Q02203	525 aa		2.21	□□□□□ -2.06
SKP2	YNL311C	UPS1	Q05776	175 aa		2.21	□□□□□ -2.06
SKP2	YNL311C	RXT3	Q07458	294 aa		2.21	□□□□□ -2.06
SKP2	YNL311C	YPL199C	Q08954	240 aa		2.21	□□□□□ -2.06
SKP2	YNL311C	FCY1	Q12178	158 aa		2.21	□□□□□ -2.06
SKP2	YNL311C	SNF6	P18888	332 aa		2.2	□□□□□ -2.06
SKP2	YNL311C	CPR5	P35176	225 aa		2.2	□□□□□ -2.06
SKP2	YNL311C	MRP8	P35719	219 aa		2.2	□□□□□ -2.06
SKP2	YNL311C	MRX1	P40050	688 aa		2.2	□□□□□ -2.06
SKP2	YNL311C	RFC2	P40348	353 aa		2.2	□□□□□ -2.06
SKP2	YNL311C	DJP1	P40564	432 aa		2.2	□□□□□ -2.06
SKP2	YNL311C	RTS2	P40962	232 aa		2.2	□□□□□ -2.06
SKP2	YNL311C	GPG1	P53130	126 aa		2.2	□□□□□ -2.06
SKP2	YNL311C	TPS1	Q00764	495 aa	Known RBP	2.2	□□□□□ -2.06
SKP2	YNL311C	RPL21A	Q02753	160 aa	Known RBP	2.2	□□□□□ -2.06
SKP2	YNL311C	YDR239C	Q03780	787 aa		2.2	□□□□□ -2.06
SKP2	YNL311C	ARP10	Q04549	284 aa		2.2	□□□□□ -2.06
SKP2	YNL311C	ATO3	Q12359	275 aa		2.2	□□□□□ -2.06
SKP2	YNL311C	ISA2	Q12425	185 aa		2.2	□□□□□ -2.06
SKP2	YNL311C	RPL21B	Q12672	160 aa	Known RBP	2.2	□□□□□ -2.06
SKP2	YNL311C	CUP2	P15315	225 aa		2.2	□□□□□ -2.06
SKP2	YNL311C	MEK1	P24719	497 aa	Predicted RBP	2.2	□□□□□ -2.06
SKP2	YNL311C	PCL1	P24867	279 aa		2.2	□□□□□ -2.06
SKP2	YNL311C	ZUO1	P32527	433 aa	Known RBP	2.2	□□□□□ -2.06
SKP2	YNL311C	RPN2	P32565	945 aa	Known RBP	2.2	□□□□□ -2.06
SKP2	YNL311C	ARC19	P33204	171 aa	Known RBP	2.2	□□□□□ -2.06
SKP2	YNL311C	YER079W	P40052	210 aa	Known RBP	2.2	□□□□□ -2.06
SKP2	YNL311C	YJL218W	P40892	196 aa	Known RBP	2.2	□□□□□ -2.06
SKP2	YNL311C	SLI1	P53304	468 aa		2.2	□□□□□ -2.06
SKP2	YNL311C	MAL13	P53338	473 aa		2.2	□□□□□ -2.06
SKP2	YNL311C	TRI1	Q05024	226 aa		2.2	□□□□□ -2.06
SKP2	YNL311C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	2.2	□□□□□ -2.06	not detected
SKP2	YNL311C	NOT5	Q12514	560 aa	Predicted RBP	2.2	□□□□□ -2.06
SKP2	YNL311C	RIB3	Q99258	208 aa		2.2	□□□□□ -2.06
SKP2	YNL311C	CDC28	P00546	298 aa	Known RBP	2.19	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 56.9 ms