RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C YHR122WP38829 231 aa9.01□□□□□ -0.97
SHM2YLR058C SOL3P38858 249 aa9.01□□□□□ -0.97
SHM2YLR058C FLX1P40464 311 aa9.01□□□□□ -0.97
SHM2YLR058C BXI1P48558 297 aa9.01□□□□□ -0.97
SHM2YLR058C AVT4P50944 713 aa9.01□□□□□ -0.97
SHM2YLR058C YNL092WP53934 400 aa9.01□□□□□ -0.97
SHM2YLR058C YPL077CQ02831 240 aa9.01□□□□□ -0.97
SHM2YLR058C SRL2Q12020 392 aa9.01□□□□□ -0.97
SHM2YLR058C ODC2Q99297 307 aa9.01□□□□□ -0.97
SHM2YLR058C GPM1P00950 247 aaKnown RBP9□□□□□ -0.97
SHM2YLR058C PET54P10834 293 aa9□□□□□ -0.97
SHM2YLR058C ARO4P32449 370 aaKnown RBP9□□□□□ -0.97
SHM2YLR058C HYM1P32464 399 aa9□□□□□ -0.97
SHM2YLR058C MCH2P36032 473 aa9□□□□□ -0.97
SHM2YLR058C YND1P40009 630 aa9□□□□□ -0.97
SHM2YLR058C PIG2P40187 538 aa9□□□□□ -0.97
SHM2YLR058C YKE4P40544 346 aa9□□□□□ -0.97
SHM2YLR058C OST1P41543 476 aaKnown RBP9□□□□□ -0.97
SHM2YLR058C YGR042WP53227 271 aa9□□□□□ -0.97
SHM2YLR058C WTM2Q12206 467 aa9□□□□□ -0.97
SHM2YLR058C NCE102Q12207 173 aaRIP-Chip data9□□□□□ -0.97not detected
SHM2YLR058C CHO1P08456 276 aa8.99□□□□□ -0.97
SHM2YLR058C NAB2P32505 525 aaKnown RBP RIP-Chip data8.99□□□□□ -0.97not detected
SHM2YLR058C GLC7P32598 312 aaKnown RBP8.99□□□□□ -0.97
SHM2YLR058C RIB7P33312 244 aa8.99□□□□□ -0.97
SHM2YLR058C SEC66P33754 206 aa8.99□□□□□ -0.97
SHM2YLR058C NSA1P53136 463 aaPredicted RBP8.99□□□□□ -0.97
SHM2YLR058C RRS1Q08746 203 aaKnown RBP8.99□□□□□ -0.97
SHM2YLR058C RPL43AP0CX25 92 aaKnown RBP8.98□□□□□ -0.97
SHM2YLR058C RPL43BP0CX26 92 aa8.98□□□□□ -0.97
SHM2YLR058C MSI1P13712 422 aa8.98□□□□□ -0.97
SHM2YLR058C REC114P32841 428 aa8.98□□□□□ -0.97
SHM2YLR058C YGP1P38616 354 aaKnown RBP8.98□□□□□ -0.97
SHM2YLR058C AIM20P40451 204 aa8.98□□□□□ -0.97
SHM2YLR058C OTU1P43558 301 aa8.98□□□□□ -0.97
SHM2YLR058C MSE1P48525 536 aa8.98□□□□□ -0.97
SHM2YLR058C SPR28Q04921 423 aa8.98□□□□□ -0.97
SHM2YLR058C RFU1Q08003 200 aa8.98□□□□□ -0.97
SHM2YLR058C HTZ1Q12692 134 aaKnown RBP8.98□□□□□ -0.97
SHM2YLR058C YBR220CP38318 560 aa8.97□□□□□ -0.97
SHM2YLR058C ARC40P38328 384 aaKnown RBP8.97□□□□□ -0.97
SHM2YLR058C UBC13P52490 153 aa8.97□□□□□ -0.97
SHM2YLR058C UTP15Q04305 513 aaKnown RBP8.97□□□□□ -0.97
SHM2YLR058C HNT1Q04344 158 aaKnown RBP8.97□□□□□ -0.97
SHM2YLR058C MRX9Q07349 420 aaKnown RBP8.97□□□□□ -0.97
SHM2YLR058C RSC58Q07979 502 aa8.97□□□□□ -0.97
SHM2YLR058C MET3P08536 511 aa8.97□□□□□ -0.97
SHM2YLR058C RPL3P14126 387 aaKnown RBP8.97□□□□□ -0.97
SHM2YLR058C URA6P15700 204 aa8.97□□□□□ -0.97
SHM2YLR058C SAG1P20840 650 aa8.97□□□□□ -0.97
SHM2YLR058C YBL010CP32788 280 aa8.97□□□□□ -0.97
SHM2YLR058C ARO9P38840 513 aaPredicted RBP8.97□□□□□ -0.97
SHM2YLR058C YMR144WP40214 342 aaKnown RBP8.97□□□□□ -0.97
SHM2YLR058C AIM25P47140 327 aa8.97□□□□□ -0.97
SHM2YLR058C DLT1Q04216 342 aa8.97□□□□□ -0.97
SHM2YLR058C YPR196WQ06595 470 aa8.97□□□□□ -0.97
SHM2YLR058C CDC28P00546 298 aaKnown RBP8.96□□□□□ -0.98
SHM2YLR058C RNP1P32385 249 aa8.96□□□□□ -0.98
SHM2YLR058C MRPL36P36531 177 aa8.96□□□□□ -0.98
SHM2YLR058C YIL029CP40538 142 aa8.96□□□□□ -0.98
SHM2YLR058C TYW3P53177 273 aa8.96□□□□□ -0.98
SHM2YLR058C TY1A-MR1Q04215 440 aa8.96□□□□□ -0.98
SHM2YLR058C YPR098CQ06089 161 aa8.96□□□□□ -0.98
SHM2YLR058C YLR031WQ07978 186 aa8.96□□□□□ -0.98
SHM2YLR058C ENV7Q12003 364 aa8.96□□□□□ -0.98
SHM2YLR058C ERP4Q12450 207 aa8.96□□□□□ -0.98
SHM2YLR058C HUT1Q12520 339 aa8.96□□□□□ -0.98
SHM2YLR058C SPS100P13130 326 aa8.95□□□□□ -0.98
SHM2YLR058C VMA5P31412 392 aaKnown RBP8.95□□□□□ -0.98
SHM2YLR058C MSS1P32559 526 aaPredicted RBP8.95□□□□□ -0.98
SHM2YLR058C VAM7P32912 316 aa8.95□□□□□ -0.98
SHM2YLR058C YKL063CP35725 167 aa8.95□□□□□ -0.98
SHM2YLR058C CRZ1P53968 678 aa8.95□□□□□ -0.98
SHM2YLR058C SPS2P08459 502 aa8.94□□□□□ -0.98
SHM2YLR058C GCD1P09032 578 aaPredicted RBP8.94□□□□□ -0.98
SHM2YLR058C CDC34P14682 295 aa8.94□□□□□ -0.98
SHM2YLR058C YCP4P25349 247 aaKnown RBP8.94□□□□□ -0.98
SHM2YLR058C YBR242WP38331 238 aa8.94□□□□□ -0.98
SHM2YLR058C YER079WP40052 210 aaKnown RBP8.94□□□□□ -0.98
SHM2YLR058C YDC1Q02896 317 aa8.94□□□□□ -0.98
SHM2YLR058C TY1A-DR2Q03964 440 aaKnown RBP8.94□□□□□ -0.98
SHM2YLR058C GAT3Q07928 141 aa8.94□□□□□ -0.98
SHM2YLR058C TDH2P00358 332 aaKnown RBP8.93□□□□□ -0.98
SHM2YLR058C RFA3P26755 122 aaKnown RBP8.93□□□□□ -0.98
SHM2YLR058C MTR2P34232 184 aaKnown RBP8.93□□□□□ -0.98
SHM2YLR058C MID1P41821 548 aa8.93□□□□□ -0.98
SHM2YLR058C EGT2P42835 1041 aa8.93□□□□□ -0.98
SHM2YLR058C SSN8P47821 323 aa8.93□□□□□ -0.98
SHM2YLR058C UFD1P53044 361 aa8.93□□□□□ -0.98
SHM2YLR058C LAP3Q01532 483 aaKnown RBP RIP-Chip data8.93□□□□□ -0.98not detected
SHM2YLR058C SKO1Q02100 647 aa8.93□□□□□ -0.98
SHM2YLR058C CDC23P16522 626 aa8.92□□□□□ -0.98
SHM2YLR058C AGA2P32781 87 aa8.92□□□□□ -0.98
SHM2YLR058C FAT1P38225 669 aa8.92□□□□□ -0.98
SHM2YLR058C PRS3P38689 320 aaKnown RBP8.92□□□□□ -0.98
SHM2YLR058C GNA1P43577 159 aaPredicted RBP8.92□□□□□ -0.98
SHM2YLR058C REP2P03872 296 aa8.91□□□□□ -0.98
SHM2YLR058C RPL6BP05739 176 aaKnown RBP8.91□□□□□ -0.98
SHM2YLR058C RPS23AP0CX29 145 aaKnown RBP8.91□□□□□ -0.98
SHM2YLR058C RPS23BP0CX30 145 aa8.91□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms