RNA–Protein interactions for RNA: YKR098C

UBP11, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP11, Length 2,154 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP11YKR098C COX15P40086 486 aa1.69□□□□□ -2.14
UBP11YKR098C RAD17P48581 401 aa1.69□□□□□ -2.14
UBP11YKR098C MRPS17Q03246 237 aaPredicted RBP1.69□□□□□ -2.14
UBP11YKR098C YDR222WQ04925 415 aa1.69□□□□□ -2.14
UBP11YKR098C YLR126CQ12288 251 aa1.69□□□□□ -2.14
UBP11YKR098C YPS3Q12303 508 aa1.69□□□□□ -2.14
UBP11YKR098C STE18P18852 110 aa1.69□□□□□ -2.14
UBP11YKR098C CAB3P36076 571 aa1.69□□□□□ -2.14
UBP11YKR098C SLX1P38324 304 aa1.69□□□□□ -2.14
UBP11YKR098C YHB1P39676 399 aaKnown RBP1.69□□□□□ -2.14
UBP11YKR098C YJR149WP47177 404 aa1.69□□□□□ -2.14
UBP11YKR098C OST3P48439 350 aa1.69□□□□□ -2.14
UBP11YKR098C TRM9P49957 279 aa1.69□□□□□ -2.14
UBP11YKR098C YMR114CQ04471 368 aaKnown RBP1.69□□□□□ -2.14
UBP11YKR098C CDC123Q05791 360 aa1.69□□□□□ -2.14
UBP11YKR098C YOL019WQ08157 551 aa1.69□□□□□ -2.14
UBP11YKR098C RRP40Q08285 240 aaKnown RBP1.69□□□□□ -2.14
UBP11YKR098C YOR186WQ08560 144 aa1.69□□□□□ -2.14
UBP11YKR098C YOL163WP0CF20 169 aa1.68□□□□□ -2.14
UBP11YKR098C SNA3P14359 133 aa1.68□□□□□ -2.14
UBP11YKR098C MRPL39P36533 70 aa1.68□□□□□ -2.14
UBP11YKR098C SPL2P38839 148 aa1.68□□□□□ -2.14
UBP11YKR098C SUR2P38992 349 aa1.68□□□□□ -2.14
UBP11YKR098C YNL194CP40169 301 aa1.68□□□□□ -2.14
UBP11YKR098C YFR045WP43617 309 aa1.68□□□□□ -2.14
UBP11YKR098C MIC26P50087 233 aa1.68□□□□□ -2.14
UBP11YKR098C CWC23P52868 283 aaPredicted RBP1.68□□□□□ -2.14
UBP11YKR098C NIF3P53081 288 aa1.68□□□□□ -2.14
UBP11YKR098C EMI1Q04406 187 aa1.68□□□□□ -2.14
UBP11YKR098C SSQ1Q05931 657 aaPredicted RBP1.68□□□□□ -2.14
UBP11YKR098C SYC1Q08553 188 aaPredicted RBP1.68□□□□□ -2.14
UBP11YKR098C YPL150WQ12152 901 aa1.68□□□□□ -2.14
UBP11YKR098C YPR011CQ12251 326 aa1.68□□□□□ -2.14
UBP11YKR098C SMT3Q12306 101 aaKnown RBP1.68□□□□□ -2.14
UBP11YKR098C PRR2Q12310 699 aa1.68□□□□□ -2.14
UBP11YKR098C TIM22Q12328 207 aa1.68□□□□□ -2.14
UBP11YKR098C YBL008W-AQ3E821 79 aa1.68□□□□□ -2.14
UBP11YKR098C YPL229WQ99395 206 aa1.68□□□□□ -2.14
UBP11YKR098C PAN1P32521 1480 aa1.68□□□□□ -2.14
UBP11YKR098C CHD1P32657 1468 aa1.68□□□□□ -2.14
UBP11YKR098C SPT3P06844 337 aa1.68□□□□□ -2.14
UBP11YKR098C BCY1P07278 416 aaKnown RBP1.68□□□□□ -2.14
UBP11YKR098C ECM13P38195 257 aa1.68□□□□□ -2.14
UBP11YKR098C PRE6P40303 254 aaKnown RBP1.68□□□□□ -2.14
UBP11YKR098C YJL028WP47062 111 aa1.68□□□□□ -2.14
UBP11YKR098C MCM22P47167 239 aa1.68□□□□□ -2.14
UBP11YKR098C RSM27P53305 110 aa1.68□□□□□ -2.14
UBP11YKR098C CUS2P53830 285 aaPredicted RBP1.68□□□□□ -2.14
UBP11YKR098C YNL046WP53956 172 aa1.68□□□□□ -2.14
UBP11YKR098C YDR124WQ04608 324 aa1.68□□□□□ -2.14
UBP11YKR098C IES3Q12345 250 aa1.68□□□□□ -2.14
UBP11YKR098C YDR157WA0A023PZE8 133 aa1.67□□□□□ -2.14
UBP11YKR098C ERD2P18414 219 aa1.67□□□□□ -2.14
UBP11YKR098C TOM40P23644 387 aaKnown RBP1.67□□□□□ -2.14
UBP11YKR098C BMH1P29311 267 aaKnown RBP1.67□□□□□ -2.14
UBP11YKR098C SSO1P32867 290 aa1.67□□□□□ -2.14
UBP11YKR098C TAF14P35189 244 aa1.67□□□□□ -2.14
UBP11YKR098C TEM1P38987 245 aa1.67□□□□□ -2.14
UBP11YKR098C YMR144WP40214 342 aaKnown RBP1.67□□□□□ -2.14
UBP11YKR098C HAM1P47119 197 aaKnown RBP1.67□□□□□ -2.14
UBP11YKR098C TOS8P53147 276 aa1.67□□□□□ -2.14
UBP11YKR098C ALG13P53178 202 aa1.67□□□□□ -2.14
UBP11YKR098C TLG1Q03322 224 aa1.67□□□□□ -2.14
UBP11YKR098C GOT1Q03554 138 aa1.67□□□□□ -2.14
UBP11YKR098C GET4Q12125 312 aa1.67□□□□□ -2.14
UBP11YKR098C YPL247CQ12523 523 aa1.67□□□□□ -2.14
UBP11YKR098C ISD11Q6Q560 94 aa1.67□□□□□ -2.14
UBP11YKR098C FAB1P34756 2278 aa1.67□□□□□ -2.14
UBP11YKR098C ZWF1P11412 505 aaKnown RBP1.66□□□□□ -2.14
UBP11YKR098C MGM101P32787 269 aaKnown RBP1.66□□□□□ -2.14
UBP11YKR098C MSA1Q08471 629 aa1.66□□□□□ -2.14
UBP11YKR098C YPR063CQ12160 140 aa1.66□□□□□ -2.14
UBP11YKR098C DCN1Q12395 269 aa1.66□□□□□ -2.14
UBP11YKR098C SIR4P11978 1358 aa1.66□□□□□ -2.14
UBP11YKR098C NUP157P40064 1391 aaKnown RBP1.66□□□□□ -2.14
UBP11YKR098C YEL009C-AA0A023PZF2 135 aa1.66□□□□□ -2.14
UBP11YKR098C SFC1P33303 322 aa1.66□□□□□ -2.14
UBP11YKR098C PRX1P34227 261 aaKnown RBP1.66□□□□□ -2.14
UBP11YKR098C SRY1P36007 326 aa1.66□□□□□ -2.14
UBP11YKR098C RFC4P40339 323 aaKnown RBP1.66□□□□□ -2.14
UBP11YKR098C ADO1P47143 340 aaKnown RBP1.66□□□□□ -2.14
UBP11YKR098C MIG2P53035 382 aa1.66□□□□□ -2.14
UBP11YKR098C MGA1P53050 456 aa1.66□□□□□ -2.14
UBP11YKR098C NSA1P53136 463 aaPredicted RBP1.66□□□□□ -2.14
UBP11YKR098C ATG38Q05789 226 aaKnown RBP1.66□□□□□ -2.14
UBP11YKR098C TPO4Q12256 659 aa1.66□□□□□ -2.14
UBP11YKR098C EMP46Q12396 444 aa1.66□□□□□ -2.14
UBP11YKR098C NOT5Q12514 560 aaPredicted RBP1.66□□□□□ -2.14
UBP11YKR098C SWI1P09547 1314 aa1.66□□□□□ -2.14
UBP11YKR098C PPH21P23594 369 aa1.65□□□□□ -2.14
UBP11YKR098C SSH1P38353 490 aaKnown RBP1.65□□□□□ -2.14
UBP11YKR098C ECO1P43605 281 aa1.65□□□□□ -2.14
UBP11YKR098C MDM34P53083 459 aa1.65□□□□□ -2.14
UBP11YKR098C ALG9P53868 555 aaKnown RBP1.65□□□□□ -2.14
UBP11YKR098C GIM3P53900 129 aa1.65□□□□□ -2.14
UBP11YKR098C YMR226CQ05016 267 aaKnown RBP1.65□□□□□ -2.14
UBP11YKR098C FCF1Q05498 189 aaPredicted RBP1.65□□□□□ -2.14
UBP11YKR098C HEM25Q07534 307 aa1.65□□□□□ -2.14
UBP11YKR098C JLP1Q12358 412 aa1.65□□□□□ -2.14
UBP11YKR098C RPL28P02406 149 aaKnown RBP1.65□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms