RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	MRPL49	P40858	161 aa	Predicted RBP	2.32	□□□□□ -2.04
VHR1	YIL056W	COS4	P43542	379 aa		2.32	□□□□□ -2.04
VHR1	YIL056W	UBC13	P52490	153 aa		2.32	□□□□□ -2.04
VHR1	YIL056W	SWC4	P53201	476 aa		2.32	□□□□□ -2.04
VHR1	YIL056W	RCF2	P53721	224 aa		2.32	□□□□□ -2.04
VHR1	YIL056W	ABF2	Q02486	183 aa		2.32	□□□□□ -2.04
VHR1	YIL056W	TRM44	Q02648	567 aa	Known RBP	2.32	□□□□□ -2.04
VHR1	YIL056W	TRM82	Q03774	444 aa		2.32	□□□□□ -2.04
VHR1	YIL056W	HEM25	Q07534	307 aa		2.32	□□□□□ -2.04
VHR1	YIL056W	YPD1	Q07688	167 aa		2.32	□□□□□ -2.04
VHR1	YIL056W	YDR018C	Q12185	396 aa		2.32	□□□□□ -2.04
VHR1	YIL056W	USB1	Q12208	290 aa	Known RBP	2.32	□□□□□ -2.04
VHR1	YIL056W	YDL012C	Q12489	107 aa		2.32	□□□□□ -2.04
VHR1	YIL056W	STH1	P32597	1359 aa		2.32	□□□□□ -2.04
VHR1	YIL056W	SPT3	P06844	337 aa		2.32	□□□□□ -2.04
VHR1	YIL056W	BCY1	P07278	416 aa	Known RBP	2.32	□□□□□ -2.04
VHR1	YIL056W	RPL23A	P0CX41	137 aa	Known RBP	2.32	□□□□□ -2.04
VHR1	YIL056W	RPL23B	P0CX42	137 aa	Known RBP	2.32	□□□□□ -2.04
VHR1	YIL056W	PHO80	P20052	293 aa		2.32	□□□□□ -2.04
VHR1	YIL056W	SPT4	P32914	102 aa	Predicted RBP	2.32	□□□□□ -2.04
VHR1	YIL056W	SGE1	P33335	543 aa		2.32	□□□□□ -2.04
VHR1	YIL056W	TIP20	P33891	701 aa		2.32	□□□□□ -2.04
VHR1	YIL056W	SSH1	P38353	490 aa	Known RBP	2.32	□□□□□ -2.04
VHR1	YIL056W	SHC1	P39000	512 aa		2.32	□□□□□ -2.04
VHR1	YIL056W	YFH7	P43591	353 aa		2.32	□□□□□ -2.04
VHR1	YIL056W	AIM23	P47015	356 aa		2.32	□□□□□ -2.04
VHR1	YIL056W	IRC18	P47056	224 aa		2.32	□□□□□ -2.04
VHR1	YIL056W	SNX4	P47057	423 aa		2.32	□□□□□ -2.04
VHR1	YIL056W	YJL016W	P47072	561 aa		2.32	□□□□□ -2.04
VHR1	YIL056W	MOG1	P47123	218 aa		2.32	□□□□□ -2.04
VHR1	YIL056W	TRM9	P49957	279 aa		2.32	□□□□□ -2.04
VHR1	YIL056W	BRR6	P53062	197 aa		2.32	□□□□□ -2.04
VHR1	YIL056W	GTR2	P53290	341 aa		2.32	□□□□□ -2.04
VHR1	YIL056W	YMR315W	Q04869	349 aa	Known RBP	2.32	□□□□□ -2.04
VHR1	YIL056W	NOC4	Q06512	552 aa	Predicted RBP	2.32	□□□□□ -2.04
VHR1	YIL056W	SFM1	Q12314	213 aa		2.32	□□□□□ -2.04
VHR1	YIL056W	UTP23	Q12339	254 aa	Known RBP	2.32	□□□□□ -2.04
VHR1	YIL056W	SNU23	Q12368	194 aa	Predicted RBP	2.32	□□□□□ -2.04
VHR1	YIL056W	YPR064W	Q12492	139 aa		2.32	□□□□□ -2.04
VHR1	YIL056W	RAD50	P12753	1312 aa		2.31	□□□□□ -2.04
VHR1	YIL056W	ADH1	P00330	348 aa	Known RBP	2.31	□□□□□ -2.04
VHR1	YIL056W	RPS28B	P0C0X0	67 aa	Known RBP	2.31	□□□□□ -2.04
VHR1	YIL056W	PET54	P10834	293 aa		2.31	□□□□□ -2.04
VHR1	YIL056W	PPH21	P23594	369 aa		2.31	□□□□□ -2.04
VHR1	YIL056W	IFM1	P25038	676 aa		2.31	□□□□□ -2.04
VHR1	YIL056W	CAT2	P32796	670 aa	Known RBP	2.31	□□□□□ -2.04
VHR1	YIL056W	JEN1	P36035	616 aa		2.31	□□□□□ -2.04
VHR1	YIL056W	ECM34	P38728	170 aa		2.31	□□□□□ -2.04
VHR1	YIL056W	EDC3	P39998	551 aa	Known RBP	2.31	□□□□□ -2.04
VHR1	YIL056W	STB1	P42845	420 aa		2.31	□□□□□ -2.04
VHR1	YIL056W	YJR111C	P47148	283 aa	Known RBP	2.31	□□□□□ -2.04
VHR1	YIL056W	OST3	P48439	350 aa		2.31	□□□□□ -2.04
VHR1	YIL056W	NBP35	P52920	328 aa		2.31	□□□□□ -2.04
VHR1	YIL056W	PEX31	P53203	462 aa		2.31	□□□□□ -2.04
VHR1	YIL056W	VHT1	P53241	593 aa		2.31	□□□□□ -2.04
VHR1	YIL056W	ARO80	Q04052	950 aa		2.31	□□□□□ -2.04
VHR1	YIL056W	YML096W	Q04489	525 aa		2.31	□□□□□ -2.04
VHR1	YIL056W	GRX8	Q05926	109 aa		2.31	□□□□□ -2.04
VHR1	YIL056W	YPR098C	Q06089	161 aa		2.31	□□□□□ -2.04
VHR1	YIL056W	YPR127W	Q06494	345 aa		2.31	□□□□□ -2.04
VHR1	YIL056W	TAZ1	Q06510	381 aa		2.31	□□□□□ -2.04
VHR1	YIL056W	RPN8	Q08723	338 aa	Known RBP	2.31	□□□□□ -2.04
VHR1	YIL056W	RDL2	Q08742	149 aa	Known RBP	2.31	□□□□□ -2.04
VHR1	YIL056W	ATP16	Q12165	160 aa		2.31	□□□□□ -2.04
VHR1	YIL056W	TPO4	Q12256	659 aa		2.31	□□□□□ -2.04
VHR1	YIL056W	RRP42	Q12277	265 aa	Predicted RBP	2.31	□□□□□ -2.04
VHR1	YIL056W	RPS28A	Q3E7X9	67 aa	Predicted RBP	2.31	□□□□□ -2.04
VHR1	YIL056W	TAF2	P23255	1407 aa		2.31	□□□□□ -2.04
VHR1	YIL056W	REP1	P03871	373 aa		2.3	□□□□□ -2.04
VHR1	YIL056W	CUP2	P15315	225 aa		2.3	□□□□□ -2.04
VHR1	YIL056W	TCA17	P32613	152 aa		2.3	□□□□□ -2.04
VHR1	YIL056W	UPS2	P35200	230 aa		2.3	□□□□□ -2.04
VHR1	YIL056W	SHE3	P38272	425 aa	Known RBP	2.3	□□□□□ -2.04
VHR1	YIL056W	YER076C	P40049	302 aa		2.3	□□□□□ -2.04
VHR1	YIL056W	YER137C	P40083	148 aa	Known RBP	2.3	□□□□□ -2.04
VHR1	YIL056W	CTK3	P46963	296 aa	Predicted RBP	2.3	□□□□□ -2.04
VHR1	YIL056W	APS3	P47064	194 aa		2.3	□□□□□ -2.04
VHR1	YIL056W	HCH1	P53834	153 aa		2.3	□□□□□ -2.04
VHR1	YIL056W	APJ1	P53940	528 aa		2.3	□□□□□ -2.04
VHR1	YIL056W	RFU1	Q08003	200 aa		2.3	□□□□□ -2.04
VHR1	YIL056W	MMT2	Q08970	484 aa		2.3	□□□□□ -2.04
VHR1	YIL056W	YOR283W	Q12040	230 aa	Known RBP	2.3	□□□□□ -2.04
VHR1	YIL056W	YLR050C	Q12155	161 aa	Known RBP	2.3	□□□□□ -2.04
VHR1	YIL056W	YLR126C	Q12288	251 aa		2.3	□□□□□ -2.04
VHR1	YIL056W	RPN6	Q12377	434 aa		2.3	□□□□□ -2.04
VHR1	YIL056W	AGC1	Q12482	902 aa		2.3	□□□□□ -2.04
VHR1	YIL056W	YOR1	P53049	1477 aa		2.3	□□□□□ -2.04
VHR1	YIL056W	SWI1	P09547	1314 aa		2.3	□□□□□ -2.04
VHR1	YIL056W	YOL163W	P0CF20	169 aa		2.3	□□□□□ -2.04
VHR1	YIL056W	GRX2	P17695	143 aa	Known RBP	2.3	□□□□□ -2.04
VHR1	YIL056W	YKR041W	P36134	250 aa		2.3	□□□□□ -2.04
VHR1	YIL056W	MRPL27	P36526	146 aa	Predicted RBP	2.3	□□□□□ -2.04
VHR1	YIL056W	PHB1	P40961	287 aa		2.3	□□□□□ -2.04
VHR1	YIL056W	FMP32	P43557	207 aa		2.3	□□□□□ -2.04
VHR1	YIL056W	YGR018C	P53211	109 aa		2.3	□□□□□ -2.04
VHR1	YIL056W	COS6	P53344	381 aa		2.3	□□□□□ -2.04
VHR1	YIL056W	SWS2	P53937	143 aa		2.3	□□□□□ -2.04
VHR1	YIL056W	COG5	P53951	403 aa		2.3	□□□□□ -2.04
VHR1	YIL056W	RHO3	Q00245	231 aa	Known RBP	2.3	□□□□□ -2.04
VHR1	YIL056W	YMR279C	Q03263	540 aa		2.3	□□□□□ -2.04

Retrieved 100 of 5,963 RNA–protein pairs in 96.2 ms