RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C KAE1P36132 386 aa2.63□□□□□ -1.99
NMD2YHR077C NAT2P37293 288 aa2.63□□□□□ -1.99
NMD2YHR077C YBR197CP38306 217 aa2.63□□□□□ -1.99
NMD2YHR077C MTC6P38849 526 aa2.63□□□□□ -1.99
NMD2YHR077C SHR5P41912 237 aa2.63□□□□□ -1.99
NMD2YHR077C ASK10P48361 1146 aa2.63□□□□□ -1.99
NMD2YHR077C OCA1P50946 238 aaPredicted RBP2.63□□□□□ -1.99
NMD2YHR077C PDR16P53860 351 aaKnown RBP2.63□□□□□ -1.99
NMD2YHR077C LUC7Q07508 261 aaPredicted RBP2.63□□□□□ -1.99
NMD2YHR077C FEX1Q08913 375 aa2.63□□□□□ -1.99
NMD2YHR077C TY1A-GR1Q12085 440 aa2.63□□□□□ -1.99
NMD2YHR077C YJR112W-AQ3E743 109 aa2.63□□□□□ -1.99
NMD2YHR077C TY1A-PR3Q6Q5H1 440 aaKnown RBP2.63□□□□□ -1.99
NMD2YHR077C TY1A-OLQ92392 440 aaKnown RBP2.63□□□□□ -1.99
NMD2YHR077C CDC39P25655 2108 aaKnown RBP2.63□□□□□ -1.99
NMD2YHR077C URA6P15700 204 aa2.63□□□□□ -1.99
NMD2YHR077C ITR1P30605 584 aa2.63□□□□□ -1.99
NMD2YHR077C SNC2P33328 115 aa2.63□□□□□ -1.99
NMD2YHR077C SRP102P36057 244 aaPredicted RBP2.63□□□□□ -1.99
NMD2YHR077C FRM2P37261 193 aa2.63□□□□□ -1.99
NMD2YHR077C ECM31P38122 312 aa2.63□□□□□ -1.99
NMD2YHR077C ARO9P38840 513 aaPredicted RBP2.63□□□□□ -1.99
NMD2YHR077C ATF1P40353 525 aa2.63□□□□□ -1.99
NMD2YHR077C ERJ5P43613 295 aaPredicted RBP2.63□□□□□ -1.99
NMD2YHR077C TRM9P49957 279 aa2.63□□□□□ -1.99
NMD2YHR077C RSM27P53305 110 aa2.63□□□□□ -1.99
NMD2YHR077C YDR102CQ03864 110 aa2.63□□□□□ -1.99
NMD2YHR077C YLR031WQ07978 186 aa2.63□□□□□ -1.99
NMD2YHR077C REX3Q12090 404 aa2.63□□□□□ -1.99
NMD2YHR077C YLR108CQ12259 485 aa2.63□□□□□ -1.99
NMD2YHR077C YRM1Q12340 786 aa2.63□□□□□ -1.99
NMD2YHR077C VMA9Q3E7B6 73 aa2.63□□□□□ -1.99
NMD2YHR077C YHR214C-EQ8TGK0 99 aa2.63□□□□□ -1.99
NMD2YHR077C HXT2P23585 541 aa2.62□□□□□ -1.99
NMD2YHR077C MIR1P23641 311 aaKnown RBP2.62□□□□□ -1.99
NMD2YHR077C VMA3P25515 160 aa2.62□□□□□ -1.99
NMD2YHR077C PEX4P29340 183 aa2.62□□□□□ -1.99
NMD2YHR077C VMA5P31412 392 aaKnown RBP2.62□□□□□ -1.99
NMD2YHR077C PPZ2P33329 710 aa2.62□□□□□ -1.99
NMD2YHR077C UMP1P38293 148 aa2.62□□□□□ -1.99
NMD2YHR077C SSH1P38353 490 aaKnown RBP2.62□□□□□ -1.99
NMD2YHR077C GRE3P38715 327 aaKnown RBP RIP-Chip data2.62□□□□□ -1.99not detected
NMD2YHR077C CTK2P46962 323 aa2.62□□□□□ -1.99
NMD2YHR077C LYS5P50113 272 aa2.62□□□□□ -1.99
NMD2YHR077C JAC1P53193 184 aa2.62□□□□□ -1.99
NMD2YHR077C RNH201P53942 307 aa2.62□□□□□ -1.99
NMD2YHR077C SAM50P53969 484 aa2.62□□□□□ -1.99
NMD2YHR077C PEX25Q02969 394 aa2.62□□□□□ -1.99
NMD2YHR077C DFG5Q05031 458 aa2.62□□□□□ -1.99
NMD2YHR077C IRC19Q07843 230 aa2.62□□□□□ -1.99
NMD2YHR077C RDL2Q08742 149 aaKnown RBP2.62□□□□□ -1.99
NMD2YHR077C TRM13Q12383 476 aa2.62□□□□□ -1.99
NMD2YHR077C ACC1Q00955 2233 aaKnown RBP2.62□□□□□ -1.99
NMD2YHR077C AIM17P23180 465 aaKnown RBP2.62□□□□□ -1.99
NMD2YHR077C MRP20P32387 263 aa2.62□□□□□ -1.99
NMD2YHR077C LSM1P47017 172 aaKnown RBP2.62□□□□□ -1.99
NMD2YHR077C UBP8P50102 471 aa2.62□□□□□ -1.99
NMD2YHR077C YGL117WP53133 265 aa2.62□□□□□ -1.99
NMD2YHR077C GTF1P53260 183 aaPredicted RBP2.62□□□□□ -1.99
NMD2YHR077C AAH1P53909 347 aa2.62□□□□□ -1.99
NMD2YHR077C NIP7Q08962 181 aaKnown RBP2.62□□□□□ -1.99
NMD2YHR077C PET20Q99373 253 aa2.62□□□□□ -1.99
NMD2YHR077C TDH1P00360 332 aaKnown RBP2.62□□□□□ -1.99
NMD2YHR077C MES1P00958 751 aaKnown RBP2.62□□□□□ -1.99
NMD2YHR077C HEM13P11353 328 aaKnown RBP2.62□□□□□ -1.99
NMD2YHR077C RPD3P32561 433 aa2.62□□□□□ -1.99
NMD2YHR077C SIP1P32578 815 aa2.62□□□□□ -1.99
NMD2YHR077C SPT10P35208 640 aa2.62□□□□□ -1.99
NMD2YHR077C POP8P38208 133 aa2.62□□□□□ -1.99
NMD2YHR077C FAT1P38225 669 aa2.62□□□□□ -1.99
NMD2YHR077C YER010CP40011 234 aa2.62□□□□□ -1.99
NMD2YHR077C BMT5P40493 336 aa2.62□□□□□ -1.99
NMD2YHR077C NSA1P53136 463 aaPredicted RBP2.62□□□□□ -1.99
NMD2YHR077C CAC2Q04199 468 aa2.62□□□□□ -1.99
NMD2YHR077C API2Q04413 109 aa2.62□□□□□ -1.99
NMD2YHR077C ALG6Q12001 544 aaKnown RBP2.62□□□□□ -1.99
NMD2YHR077C COX5BP00425 151 aa2.61□□□□□ -1.99
NMD2YHR077C RIP1P08067 215 aa2.61□□□□□ -1.99
NMD2YHR077C HOM3P10869 527 aa2.61□□□□□ -1.99
NMD2YHR077C ARO3P14843 370 aaKnown RBP2.61□□□□□ -1.99
NMD2YHR077C MDH2P22133 377 aa2.61□□□□□ -1.99
NMD2YHR077C YCR025CP25352 136 aa2.61□□□□□ -1.99
NMD2YHR077C TIP1P27654 210 aaPredicted RBP2.61□□□□□ -1.99
NMD2YHR077C RPC34P32910 317 aa2.61□□□□□ -1.99
NMD2YHR077C MRT4P33201 236 aaKnown RBP2.61□□□□□ -1.99
NMD2YHR077C GPI16P38875 610 aa2.61□□□□□ -1.99
NMD2YHR077C GCV3P39726 170 aaPredicted RBP2.61□□□□□ -1.99
NMD2YHR077C SOK2P53438 785 aaPredicted RBP2.61□□□□□ -1.99
NMD2YHR077C YNL165WP53891 406 aa2.61□□□□□ -1.99
NMD2YHR077C TIM44Q01852 431 aa2.61□□□□□ -1.99
NMD2YHR077C CTF19Q02732 369 aa2.61□□□□□ -1.99
NMD2YHR077C YOR376WQ08900 122 aa2.61□□□□□ -1.99
NMD2YHR077C CDC28P00546 298 aaKnown RBP2.61□□□□□ -1.99
NMD2YHR077C CDC34P14682 295 aa2.61□□□□□ -1.99
NMD2YHR077C IFM1P25038 676 aa2.61□□□□□ -1.99
NMD2YHR077C SWD2P36104 329 aaPredicted RBP2.61□□□□□ -1.99
NMD2YHR077C YMR144WP40214 342 aaKnown RBP2.61□□□□□ -1.99
NMD2YHR077C MTM1P53320 366 aa2.61□□□□□ -1.99
NMD2YHR077C MRPL22P53881 309 aa2.61□□□□□ -1.99
NMD2YHR077C THI74Q04083 370 aa2.61□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms