RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTK1	YKL139W	SNU23	Q12368	194 aa	Predicted RBP	3.11	□□□□□ -1.91
CTK1	YKL139W	MAL32	P38158	584 aa		3.1	□□□□□ -1.91
CTK1	YKL139W	ASP1	P38986	381 aa	Predicted RBP	3.1	□□□□□ -1.91
CTK1	YKL139W	AVT6	P40074	448 aa		3.1	□□□□□ -1.91
CTK1	YKL139W	UFE1	P41834	346 aa		3.1	□□□□□ -1.91
CTK1	YKL139W	MAL12	P53341	584 aa		3.1	□□□□□ -1.91
CTK1	YKL139W	ATG17	Q06410	417 aa		3.1	□□□□□ -1.91
CTK1	YKL139W	COQ10	Q08058	207 aa		3.1	□□□□□ -1.91
CTK1	YKL139W	CHD1	P32657	1468 aa		3.1	□□□□□ -1.91
CTK1	YKL139W	CDC33	P07260	213 aa	Known RBP	3.09	□□□□□ -1.91
CTK1	YKL139W	YMR31	P19955	123 aa		3.09	□□□□□ -1.91
CTK1	YKL139W	PHO80	P20052	293 aa		3.09	□□□□□ -1.91
CTK1	YKL139W	OSM1	P21375	501 aa	Known RBP	3.09	□□□□□ -1.91
CTK1	YKL139W	CBT1	P36038	271 aa	Predicted RBP	3.09	□□□□□ -1.91
CTK1	YKL139W	PHO89	P38361	574 aa		3.09	□□□□□ -1.91
CTK1	YKL139W	GOS1	P38736	223 aa		3.09	□□□□□ -1.91
CTK1	YKL139W	CAX4	P53223	239 aa		3.09	□□□□□ -1.91
CTK1	YKL139W	RHO3	Q00245	231 aa	Known RBP	3.09	□□□□□ -1.91
CTK1	YKL139W	YMR166C	Q03829	368 aa		3.09	□□□□□ -1.91
CTK1	YKL139W	DIB1	Q06819	143 aa	Predicted RBP	3.09	□□□□□ -1.91
CTK1	YKL139W	SEY1	Q99287	776 aa		3.09	□□□□□ -1.91
CTK1	YKL139W	AUS1	Q08409	1394 aa		3.09	□□□□□ -1.92
CTK1	YKL139W	SGE1	P33335	543 aa		3.08	□□□□□ -1.92
CTK1	YKL139W	PRP18	P33411	251 aa	Predicted RBP	3.08	□□□□□ -1.92
CTK1	YKL139W	HMT1	P38074	348 aa		3.08	□□□□□ -1.92
CTK1	YKL139W	FZO1	P38297	855 aa		3.08	□□□□□ -1.92
CTK1	YKL139W	FRT2	P39734	528 aa		3.08	□□□□□ -1.92
CTK1	YKL139W	ERG28	P40030	148 aa		3.08	□□□□□ -1.92
CTK1	YKL139W	SNZ3	P43545	298 aa		3.08	□□□□□ -1.92
CTK1	YKL139W	SWT21	P53873	357 aa	Predicted RBP	3.08	□□□□□ -1.92
CTK1	YKL139W	MRPS17	Q03246	237 aa	Predicted RBP	3.08	□□□□□ -1.92
CTK1	YKL139W	SSQ1	Q05931	657 aa	Predicted RBP	3.08	□□□□□ -1.92
CTK1	YKL139W	SAC3	P46674	1301 aa		3.08	□□□□□ -1.92
CTK1	YKL139W	RPS19A	P07280	144 aa	Known RBP	3.08	□□□□□ -1.92
CTK1	YKL139W	RPS19B	P07281	144 aa	Predicted RBP	3.08	□□□□□ -1.92
CTK1	YKL139W	YKR104W	P0CE69	306 aa		3.08	□□□□□ -1.92
CTK1	YKL139W	STE18	P18852	110 aa		3.08	□□□□□ -1.92
CTK1	YKL139W	ERG2	P32352	222 aa		3.08	□□□□□ -1.92
CTK1	YKL139W	YOX1	P34161	385 aa		3.08	□□□□□ -1.92
CTK1	YKL139W	CUE1	P38428	203 aa		3.08	□□□□□ -1.92
CTK1	YKL139W	URA8	P38627	578 aa	Predicted RBP	3.08	□□□□□ -1.92
CTK1	YKL139W	BDH1	P39714	382 aa		3.08	□□□□□ -1.92
CTK1	YKL139W	COX15	P40086	486 aa		3.08	□□□□□ -1.92
CTK1	YKL139W	SLX9	P53251	210 aa	Predicted RBP	3.08	□□□□□ -1.92
CTK1	YKL139W	SNZ2	P53824	298 aa		3.08	□□□□□ -1.92
CTK1	YKL139W	DXO1	Q06349	442 aa		3.08	□□□□□ -1.92
CTK1	YKL139W	YPR147C	Q06522	304 aa	Known RBP	3.08	□□□□□ -1.92
CTK1	YKL139W	YDL211C	Q12121	372 aa		3.08	□□□□□ -1.92
CTK1	YKL139W	YKL183C-A	Q3E765	70 aa		3.08	□□□□□ -1.92
CTK1	YKL139W	JIP3	O13555	125 aa		3.07	□□□□□ -1.92
CTK1	YKL139W	YBR121C-A	P0C5L4	52 aa		3.07	□□□□□ -1.92
CTK1	YKL139W	YBL081W	P38180	368 aa	Known RBP	3.07	□□□□□ -1.92
CTK1	YKL139W	ARN2	P38724	620 aa		3.07	□□□□□ -1.92
CTK1	YKL139W	SYS1	P41544	203 aa		3.07	□□□□□ -1.92
CTK1	YKL139W	YRB1	P41920	201 aa	Known RBP	3.07	□□□□□ -1.92
CTK1	YKL139W	RAD17	P48581	401 aa		3.07	□□□□□ -1.92
CTK1	YKL139W	COQ5	P49017	307 aa		3.07	□□□□□ -1.92
CTK1	YKL139W	YKL075C	P36083	450 aa		3.06	□□□□□ -1.92
CTK1	YKL139W	YHR127W	P38833	243 aa	Known RBP	3.06	□□□□□ -1.92
CTK1	YKL139W	SEO1	P39709	593 aa		3.06	□□□□□ -1.92
CTK1	YKL139W	YNL194C	P40169	301 aa		3.06	□□□□□ -1.92
CTK1	YKL139W	YFL012W	P43580	148 aa		3.06	□□□□□ -1.92
CTK1	YKL139W	RPE1	P46969	238 aa		3.06	□□□□□ -1.92
CTK1	YKL139W	UFD1	P53044	361 aa		3.06	□□□□□ -1.92
CTK1	YKL139W	GIM3	P53900	129 aa		3.06	□□□□□ -1.92
CTK1	YKL139W	SPG4	Q04438	115 aa		3.06	□□□□□ -1.92
CTK1	YKL139W	ATG38	Q05789	226 aa	Known RBP	3.06	□□□□□ -1.92
CTK1	YKL139W	NNT1	Q05874	261 aa		3.06	□□□□□ -1.92
CTK1	YKL139W	PIN3	Q06449	215 aa		3.06	□□□□□ -1.92
CTK1	YKL139W	YLR126C	Q12288	251 aa		3.06	□□□□□ -1.92
CTK1	YKL139W	ATG5	Q12380	294 aa		3.06	□□□□□ -1.92
CTK1	YKL139W	NCB2	Q92317	146 aa		3.06	□□□□□ -1.92
CTK1	YKL139W	COS2	P0CX12	379 aa		3.05	□□□□□ -1.92
CTK1	YKL139W	COS3	P0CX13	379 aa		3.05	□□□□□ -1.92
CTK1	YKL139W	CDC10	P25342	322 aa	Known RBP	3.05	□□□□□ -1.92
CTK1	YKL139W	COS4	P43542	379 aa		3.05	□□□□□ -1.92
CTK1	YKL139W	CPR7	P47103	393 aa		3.05	□□□□□ -1.92
CTK1	YKL139W	YGR067C	P53243	804 aa		3.05	□□□□□ -1.92
CTK1	YKL139W	AAH1	P53909	347 aa		3.05	□□□□□ -1.92
CTK1	YKL139W	OSH6	Q02201	448 aa		3.05	□□□□□ -1.92
CTK1	YKL139W	FUS3	P16892	353 aa	Known RBP	3.04	□□□□□ -1.92
CTK1	YKL139W	MGM101	P32787	269 aa	Known RBP	3.04	□□□□□ -1.92
CTK1	YKL139W	NTF2	P33331	125 aa	Known RBP	3.04	□□□□□ -1.92
CTK1	YKL139W	CSG2	P35206	410 aa		3.04	□□□□□ -1.92
CTK1	YKL139W	YHI9	P38765	294 aa		3.04	□□□□□ -1.92
CTK1	YKL139W	CWC23	P52868	283 aa	Predicted RBP	3.04	□□□□□ -1.92
CTK1	YKL139W	YPL039W	Q03080	316 aa		3.04	□□□□□ -1.92
CTK1	YKL139W	MRX8	Q05473	314 aa		3.04	□□□□□ -1.92
CTK1	YKL139W	CDC123	Q05791	360 aa		3.04	□□□□□ -1.92
CTK1	YKL139W	RRP40	Q08285	240 aa	Known RBP	3.04	□□□□□ -1.92
CTK1	YKL139W	GET4	Q12125	312 aa		3.04	□□□□□ -1.92
CTK1	YKL139W	CPT1	P17898	393 aa		3.04	□□□□□ -1.92
CTK1	YKL139W	PRE7	P23724	241 aa	Known RBP	3.04	□□□□□ -1.92
CTK1	YKL139W	GDH2	P33327	1092 aa	Known RBP	3.04	□□□□□ -1.92
CTK1	YKL139W	MRPL39	P36533	70 aa		3.04	□□□□□ -1.92
CTK1	YKL139W	MRPS9	P38120	278 aa		3.04	□□□□□ -1.92
CTK1	YKL139W	YHL044W	P38727	235 aa		3.04	□□□□□ -1.92
CTK1	YKL139W	PRE6	P40303	254 aa	Known RBP	3.04	□□□□□ -1.92
CTK1	YKL139W	TRM9	P49957	279 aa		3.04	□□□□□ -1.92
CTK1	YKL139W	CUS2	P53830	285 aa	Predicted RBP	3.04	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms