RNA–Protein interactions for RNA: YJR112W

NNF1, Transcript of Essential component of the MIND kinetochore complex, yeastyeast

Gene NNF1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NNF1YJR112W YFL064CP43540 174 aa2.53□□□□□ -2
NNF1YJR112W FLC3P53121 802 aa2.53□□□□□ -2
NNF1YJR112W PEX31P53203 462 aa2.53□□□□□ -2
NNF1YJR112W ECM11Q04110 302 aa2.53□□□□□ -2
NNF1YJR112W SFH1Q06168 426 aa2.53□□□□□ -2
NNF1YJR112W ARV1Q06541 321 aa2.53□□□□□ -2
NNF1YJR112W YOL107WQ12239 342 aa2.53□□□□□ -2
NNF1YJR112W YAL063C-AQ3E791 96 aa2.53□□□□□ -2
NNF1YJR112W YBL111CQ3E7Y5 667 aa2.53□□□□□ -2
NNF1YJR112W RPP0P05317 312 aaKnown RBP2.52□□□□□ -2.01
NNF1YJR112W RPS3P05750 240 aaKnown RBP2.52□□□□□ -2.01
NNF1YJR112W CUP1-1P0CX80 61 aa2.52□□□□□ -2.01
NNF1YJR112W CUP1-2P0CX81 61 aa2.52□□□□□ -2.01
NNF1YJR112W VPS1P21576 704 aaKnown RBP2.52□□□□□ -2.01
NNF1YJR112W ATG15P25641 520 aa2.52□□□□□ -2.01
NNF1YJR112W ZIP1P31111 875 aa2.52□□□□□ -2.01
NNF1YJR112W CSE1P33307 960 aa2.52□□□□□ -2.01
NNF1YJR112W MRPL3P36516 390 aa2.52□□□□□ -2.01
NNF1YJR112W ATG12P38316 186 aa2.52□□□□□ -2.01
NNF1YJR112W HSM3P38348 480 aa2.52□□□□□ -2.01
NNF1YJR112W ASP1P38986 381 aaPredicted RBP2.52□□□□□ -2.01
NNF1YJR112W SMC2P38989 1170 aaKnown RBP2.52□□□□□ -2.01
NNF1YJR112W NPT1P39683 429 aaKnown RBP2.52□□□□□ -2.01
NNF1YJR112W KRE29P40026 464 aa2.52□□□□□ -2.01
NNF1YJR112W AVT7P40501 490 aa2.52□□□□□ -2.01
NNF1YJR112W YIL012WP40551 113 aa2.52□□□□□ -2.01
NNF1YJR112W CAX4P53223 239 aa2.52□□□□□ -2.01
NNF1YJR112W YPL113CQ02961 396 aa2.52□□□□□ -2.01
NNF1YJR112W VPS60Q03390 229 aa2.52□□□□□ -2.01
NNF1YJR112W MRX8Q05473 314 aa2.52□□□□□ -2.01
NNF1YJR112W CTS2Q06350 511 aa2.52□□□□□ -2.01
NNF1YJR112W YDL211CQ12121 372 aa2.52□□□□□ -2.01
NNF1YJR112W MSF1P08425 469 aa2.51□□□□□ -2.01
NNF1YJR112W IMP1P28627 190 aa2.51□□□□□ -2.01
NNF1YJR112W COY1P34237 679 aa2.51□□□□□ -2.01
NNF1YJR112W EDC2P40023 145 aaPredicted RBP2.51□□□□□ -2.01
NNF1YJR112W TAD2P47058 250 aa2.51□□□□□ -2.01
NNF1YJR112W PRP24P49960 444 aaKnown RBP2.51□□□□□ -2.01
NNF1YJR112W LIF1P53150 421 aa2.51□□□□□ -2.01
NNF1YJR112W OST6Q03723 332 aa2.51□□□□□ -2.01
NNF1YJR112W ARC18Q05933 178 aaKnown RBP2.51□□□□□ -2.01
NNF1YJR112W LOA1Q06508 300 aa2.51□□□□□ -2.01
NNF1YJR112W BTS1Q12051 335 aa2.51□□□□□ -2.01
NNF1YJR112W MLP1Q02455 1875 aaKnown RBP2.51□□□□□ -2.01
NNF1YJR112W VPS13Q07878 3144 aa2.51□□□□□ -2.01
NNF1YJR112W TAO3P40468 2376 aa2.5□□□□□ -2.01
NNF1YJR112W HIS1P00498 297 aaKnown RBP2.5□□□□□ -2.01
NNF1YJR112W CKA2P19454 339 aa2.5□□□□□ -2.01
NNF1YJR112W RRT12P25381 491 aa2.5□□□□□ -2.01
NNF1YJR112W SEN34P39707 275 aa2.5□□□□□ -2.01
NNF1YJR112W DDI1P40087 428 aa2.5□□□□□ -2.01
NNF1YJR112W MNT4P53745 580 aa2.5□□□□□ -2.01
NNF1YJR112W ALG11P53954 548 aaKnown RBP2.5□□□□□ -2.01
NNF1YJR112W MRS2Q01926 470 aa2.5□□□□□ -2.01
NNF1YJR112W SMD1Q02260 146 aaPredicted RBP2.5□□□□□ -2.01
NNF1YJR112W YLR173WQ06247 608 aa2.5□□□□□ -2.01
NNF1YJR112W CPT1P17898 393 aa2.49□□□□□ -2.01
NNF1YJR112W DAL82P21705 255 aa2.49□□□□□ -2.01
NNF1YJR112W CWP1P28319 239 aa2.49□□□□□ -2.01
NNF1YJR112W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
NNF1YJR112W TRR2P38816 342 aa2.49□□□□□ -2.01
NNF1YJR112W SER33P40510 469 aa2.49□□□□□ -2.01
NNF1YJR112W COG7P53195 279 aa2.49□□□□□ -2.01
NNF1YJR112W YNL134CP53912 376 aaKnown RBP2.49□□□□□ -2.01
NNF1YJR112W ADH6Q04894 360 aaKnown RBP2.49□□□□□ -2.01
NNF1YJR112W SEC10Q06245 871 aa2.49□□□□□ -2.01
NNF1YJR112W CTR3Q06686 241 aa2.49□□□□□ -2.01
NNF1YJR112W PER33Q12144 273 aa2.49□□□□□ -2.01
NNF1YJR112W YDL012CQ12489 107 aa2.49□□□□□ -2.01
NNF1YJR112W SAC3P46674 1301 aa2.48□□□□□ -2.01
NNF1YJR112W YAL064W-BO13512 126 aa2.48□□□□□ -2.01
NNF1YJR112W CDC42P19073 191 aa2.48□□□□□ -2.01
NNF1YJR112W PEX3P28795 441 aa2.48□□□□□ -2.01
NNF1YJR112W DED81P38707 554 aaKnown RBP2.48□□□□□ -2.01
NNF1YJR112W BIG1P38813 335 aa2.48□□□□□ -2.01
NNF1YJR112W RTR1P40084 226 aaPredicted RBP2.48□□□□□ -2.01
NNF1YJR112W ASG7P46993 209 aa2.48□□□□□ -2.01
NNF1YJR112W NBP1P52919 319 aaPredicted RBP2.48□□□□□ -2.01
NNF1YJR112W UFD1P53044 361 aa2.48□□□□□ -2.01
NNF1YJR112W HST4P53688 370 aa2.48□□□□□ -2.01
NNF1YJR112W SDC1Q03323 175 aa2.48□□□□□ -2.01
NNF1YJR112W YDL144CQ07589 356 aa2.48□□□□□ -2.01
NNF1YJR112W SME1Q12330 94 aaPredicted RBP2.48□□□□□ -2.01
NNF1YJR112W YDR524C-BQ3E6R4 66 aa2.48□□□□□ -2.01
NNF1YJR112W YOS9Q99220 542 aa2.48□□□□□ -2.01
NNF1YJR112W SWI1P09547 1314 aa2.47□□□□□ -2.01
NNF1YJR112W YMR316C-AI2HB70 103 aa2.47□□□□□ -2.01
NNF1YJR112W RAD3P06839 778 aa2.47□□□□□ -2.01
NNF1YJR112W MRP1P10662 321 aaKnown RBP2.47□□□□□ -2.01
NNF1YJR112W CUP2P15315 225 aa2.47□□□□□ -2.01
NNF1YJR112W PHO80P20052 293 aa2.47□□□□□ -2.01
NNF1YJR112W PRS4P38063 326 aaPredicted RBP2.47□□□□□ -2.01
NNF1YJR112W PRS2P38620 318 aaKnown RBP2.47□□□□□ -2.01
NNF1YJR112W YHR045WP38775 560 aa2.47□□□□□ -2.01
NNF1YJR112W AVT6P40074 448 aa2.47□□□□□ -2.01
NNF1YJR112W SYS1P41544 203 aa2.47□□□□□ -2.01
NNF1YJR112W YFH7P43591 353 aa2.47□□□□□ -2.01
NNF1YJR112W BNA6P43619 295 aa2.47□□□□□ -2.01
NNF1YJR112W NBP35P52920 328 aa2.47□□□□□ -2.01
NNF1YJR112W TIM21P53220 239 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms