RNA–Protein interactions for RNA: YDR013W

PSF1, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeast

Gene PSF1, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PSF1	YDR013W	SPG5	P42933	373 aa		3	□□□□□ -1.93
PSF1	YDR013W	GNA1	P43577	159 aa	Predicted RBP	3	□□□□□ -1.93
PSF1	YDR013W	CIS3	P47001	227 aa		3	□□□□□ -1.93
PSF1	YDR013W	SNN1	P48232	102 aa		3	□□□□□ -1.93
PSF1	YDR013W	BXI1	P48558	297 aa		3	□□□□□ -1.93
PSF1	YDR013W	UBC12	P52491	188 aa		3	□□□□□ -1.93
PSF1	YDR013W	FHN1	P53279	174 aa		3	□□□□□ -1.93
PSF1	YDR013W	ERG13	P54839	491 aa	Known RBP	3	□□□□□ -1.93
PSF1	YDR013W	SNP1	Q00916	300 aa	Predicted RBP	3	□□□□□ -1.93
PSF1	YDR013W	MEH1	Q02205	184 aa		3	□□□□□ -1.93
PSF1	YDR013W	NCE101	Q02820	53 aa		3	□□□□□ -1.93
PSF1	YDR013W	HAS1	Q03532	505 aa	Known RBP	3	□□□□□ -1.93
PSF1	YDR013W	BNA7	Q04066	261 aa		3	□□□□□ -1.93
PSF1	YDR013W	CTS2	Q06350	511 aa		3	□□□□□ -1.93
PSF1	YDR013W	YLR352W	Q06479	807 aa		3	□□□□□ -1.93
PSF1	YDR013W	YLR030W	Q07967	263 aa		3	□□□□□ -1.93
PSF1	YDR013W	RSC58	Q07979	502 aa		3	□□□□□ -1.93
PSF1	YDR013W	ENV7	Q12003	364 aa		3	□□□□□ -1.93
PSF1	YDR013W	ATP16	Q12165	160 aa		3	□□□□□ -1.93
PSF1	YDR013W	VAM3	Q12241	283 aa		3	□□□□□ -1.93
PSF1	YDR013W	INP53	Q12271	1107 aa		3	□□□□□ -1.93
PSF1	YDR013W	YOS9	Q99220	542 aa		3	□□□□□ -1.93
PSF1	YDR013W	RPL1A	P0CX43	217 aa	Known RBP	2.99	□□□□□ -1.93
PSF1	YDR013W	RPL1B	P0CX44	217 aa	Known RBP	2.99	□□□□□ -1.93
PSF1	YDR013W	NHP6B	P11633	99 aa	Known RBP	2.99	□□□□□ -1.93
PSF1	YDR013W	PDX1	P16451	410 aa		2.99	□□□□□ -1.93
PSF1	YDR013W	SNF5	P18480	905 aa		2.99	□□□□□ -1.93
PSF1	YDR013W	YCR061W	P25639	631 aa		2.99	□□□□□ -1.93
PSF1	YDR013W	RFA3	P26755	122 aa	Known RBP	2.99	□□□□□ -1.93
PSF1	YDR013W	CAM1	P29547	415 aa	Known RBP	2.99	□□□□□ -1.93
PSF1	YDR013W	ISC10	P32645	267 aa		2.99	□□□□□ -1.93
PSF1	YDR013W	PTR2	P32901	601 aa		2.99	□□□□□ -1.93
PSF1	YDR013W	VAM7	P32912	316 aa		2.99	□□□□□ -1.93
PSF1	YDR013W	PPZ2	P33329	710 aa		2.99	□□□□□ -1.93
PSF1	YDR013W	TCM62	P38228	572 aa	Known RBP	2.99	□□□□□ -1.93
PSF1	YDR013W	SDS24	P38314	527 aa		2.99	□□□□□ -1.93
PSF1	YDR013W	ANS1	P38832	159 aa		2.99	□□□□□ -1.93
PSF1	YDR013W	FAA3	P39002	694 aa		2.99	□□□□□ -1.93
PSF1	YDR013W	SHO1	P40073	367 aa		2.99	□□□□□ -1.93
PSF1	YDR013W	YJR011C	P47086	261 aa	Predicted RBP	2.99	□□□□□ -1.93
PSF1	YDR013W	GPI14	P47088	403 aa	Known RBP	2.99	□□□□□ -1.93
PSF1	YDR013W	NIT3	P49954	291 aa		2.99	□□□□□ -1.93
PSF1	YDR013W	MTL1	P53214	551 aa		2.99	□□□□□ -1.93
PSF1	YDR013W	ART5	P53244	586 aa	Known RBP	2.99	□□□□□ -1.93
PSF1	YDR013W	PDR16	P53860	351 aa	Known RBP	2.99	□□□□□ -1.93
PSF1	YDR013W	ELA1	P53861	379 aa	Predicted RBP	2.99	□□□□□ -1.93
PSF1	YDR013W	AAH1	P53909	347 aa		2.99	□□□□□ -1.93
PSF1	YDR013W	SAM50	P53969	484 aa		2.99	□□□□□ -1.93
PSF1	YDR013W	ACT1	P60010	375 aa	Known RBP	2.99	□□□□□ -1.93
PSF1	YDR013W	YDR249C	Q03787	373 aa		2.99	□□□□□ -1.93
PSF1	YDR013W	LRS4	Q04087	347 aa	Known RBP	2.99	□□□□□ -1.93
PSF1	YDR013W	DLT1	Q04216	342 aa		2.99	□□□□□ -1.93
PSF1	YDR013W	NBA1	Q08229	501 aa	Known RBP	2.99	□□□□□ -1.93
PSF1	YDR013W	AVO1	Q08236	1176 aa		2.99	□□□□□ -1.93
PSF1	YDR013W	HNT3	Q08702	217 aa		2.99	□□□□□ -1.93
PSF1	YDR013W	YPL272C	Q08984	517 aa		2.99	□□□□□ -1.93
PSF1	YDR013W	SRO7	Q12038	1033 aa		2.99	□□□□□ -1.93
PSF1	YDR013W	AEP3	Q12089	606 aa		2.99	□□□□□ -1.93
PSF1	YDR013W	REX3	Q12090	404 aa		2.99	□□□□□ -1.93
PSF1	YDR013W	YLR108C	Q12259	485 aa		2.99	□□□□□ -1.93
PSF1	YDR013W	MED4	Q12343	284 aa		2.99	□□□□□ -1.93
PSF1	YDR013W	EAF3	Q12432	401 aa		2.99	□□□□□ -1.93
PSF1	YDR013W	YGR161W-C	Q3E744	92 aa		2.99	□□□□□ -1.93
PSF1	YDR013W	YAL064W-B	O13512	126 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	REP2	P03872	296 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	GDH1	P07262	454 aa	Known RBP	2.98	□□□□□ -1.93
PSF1	YDR013W	SGA1	P08019	549 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	UBI4	P0CG63	381 aa	Known RBP	2.98	□□□□□ -1.93
PSF1	YDR013W	RPL40A	P0CH08	128 aa	Known RBP	2.98	□□□□□ -1.93
PSF1	YDR013W	RPL40B	P0CH09	128 aa	Known RBP	2.98	□□□□□ -1.93
PSF1	YDR013W	MRP2	P10663	115 aa	Predicted RBP	2.98	□□□□□ -1.93
PSF1	YDR013W	BAR1	P12630	587 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	CTA1	P15202	515 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	STP22	P25604	385 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	AFG1	P32317	509 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	ERG24	P32462	438 aa	Known RBP	2.98	□□□□□ -1.93
PSF1	YDR013W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	2.98	□□□□□ -1.93	not detected
PSF1	YDR013W	FRM2	P37261	193 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	POP8	P38208	133 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	UMP1	P38293	148 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	PFS1	P38872	237 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	GCV3	P39726	170 aa	Predicted RBP	2.98	□□□□□ -1.93
PSF1	YDR013W	YEL068C	P39977	110 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	YNL195C	P40168	261 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	SLM1	P40485	686 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	EMC5	P40540	141 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	CAF16	P43569	289 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	ERJ5	P43613	295 aa	Predicted RBP	2.98	□□□□□ -1.93
PSF1	YDR013W	TAD2	P47058	250 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	ASK10	P48361	1146 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	LYS20	P48570	428 aa	Known RBP	2.98	□□□□□ -1.93
PSF1	YDR013W	AVT4	P50944	713 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	OCA1	P50946	238 aa	Predicted RBP	2.98	□□□□□ -1.93
PSF1	YDR013W	SEH1	P53011	349 aa	Known RBP	2.98	□□□□□ -1.93
PSF1	YDR013W	YGL235W	P53071	178 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	YGL204C	P53089	101 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	PNC1	P53184	216 aa	Known RBP	2.98	□□□□□ -1.93
PSF1	YDR013W	BSC5	P53755	489 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	CWC24	P53769	259 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	MRPL22	P53881	309 aa		2.98	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms