RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC1, Length 846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC1YDL006W MER1P16523 270 aa3.9□□□□□ -1.79
PTC1YDL006W GRR1P24814 1151 aa3.9□□□□□ -1.79
PTC1YDL006W NTG1P31378 399 aa3.9□□□□□ -1.79
PTC1YDL006W NUF2P33895 451 aa3.9□□□□□ -1.79
PTC1YDL006W YHR177WP38867 453 aa3.9□□□□□ -1.79
PTC1YDL006W PRP39P39682 629 aaKnown RBP3.9□□□□□ -1.79
PTC1YDL006W THO1P40040 218 aaKnown RBP3.9□□□□□ -1.79
PTC1YDL006W RMR1P53060 241 aa3.9□□□□□ -1.79
PTC1YDL006W YIP5P53108 310 aa3.9□□□□□ -1.79
PTC1YDL006W SPR6Q01684 191 aa3.9□□□□□ -1.79
PTC1YDL006W NUP116Q02630 1113 aa3.9□□□□□ -1.79
PTC1YDL006W KRE28Q04431 385 aa3.9□□□□□ -1.79
PTC1YDL006W YMR226CQ05016 267 aaKnown RBP3.9□□□□□ -1.79
PTC1YDL006W DBP9Q06218 594 aaKnown RBP3.9□□□□□ -1.79
PTC1YDL006W RRT8Q08219 342 aa3.9□□□□□ -1.79
PTC1YDL006W SFM1Q12314 213 aa3.9□□□□□ -1.79
PTC1YDL006W YOP1Q12402 180 aa3.9□□□□□ -1.79
PTC1YDL006W YDL199CQ12407 687 aa3.9□□□□□ -1.79
PTC1YDL006W STT4P37297 1900 aa3.89□□□□□ -1.79
PTC1YDL006W POL2P21951 2222 aaKnown RBP3.89□□□□□ -1.79
PTC1YDL006W TIM9O74700 87 aa3.89□□□□□ -1.79
PTC1YDL006W OPI3P05375 206 aa3.89□□□□□ -1.79
PTC1YDL006W TPK3P05986 398 aa3.89□□□□□ -1.79
PTC1YDL006W ZWF1P11412 505 aaKnown RBP3.89□□□□□ -1.79
PTC1YDL006W RPB5P20434 215 aa3.89□□□□□ -1.79
PTC1YDL006W RPS1BP23248 255 aaKnown RBP3.89□□□□□ -1.79
PTC1YDL006W FAA1P30624 700 aaKnown RBP3.89□□□□□ -1.79
PTC1YDL006W TOA2P32774 122 aa3.89□□□□□ -1.79
PTC1YDL006W GDH2P33327 1092 aaKnown RBP3.89□□□□□ -1.79
PTC1YDL006W TAF14P35189 244 aa3.89□□□□□ -1.79
PTC1YDL006W MRPL15P36523 253 aa3.89□□□□□ -1.79
PTC1YDL006W RIB1P38066 345 aa3.89□□□□□ -1.79
PTC1YDL006W SNL1P40548 159 aa3.89□□□□□ -1.79
PTC1YDL006W RPS12P48589 143 aaKnown RBP3.89□□□□□ -1.79
PTC1YDL006W GPI8P49018 411 aa3.89□□□□□ -1.79
PTC1YDL006W TRM9P49957 279 aa3.89□□□□□ -1.79
PTC1YDL006W TOS2P50078 622 aa3.89□□□□□ -1.79
PTC1YDL006W ATP22P50273 684 aaPredicted RBP3.89□□□□□ -1.79
PTC1YDL006W RRN9P53437 365 aa3.89□□□□□ -1.79
PTC1YDL006W COS1P53822 381 aa3.89□□□□□ -1.79
PTC1YDL006W RRN5Q02983 363 aa3.89□□□□□ -1.79
PTC1YDL006W SPO77Q06134 477 aa3.89□□□□□ -1.79
PTC1YDL006W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
PTC1YDL006W LDS2Q08218 356 aa3.89□□□□□ -1.79
PTC1YDL006W BSC6Q08280 497 aa3.89□□□□□ -1.79
PTC1YDL006W RRG7Q08774 242 aaPredicted RBP3.89□□□□□ -1.79
PTC1YDL006W YOR342CQ12182 319 aa3.89□□□□□ -1.79
PTC1YDL006W YGK3Q12222 375 aaPredicted RBP3.89□□□□□ -1.79
PTC1YDL006W WTM1Q12363 437 aaKnown RBP3.89□□□□□ -1.79
PTC1YDL006W CHA1P25379 360 aaKnown RBP3.88□□□□□ -1.79
PTC1YDL006W UBC8P28263 218 aa3.88□□□□□ -1.79
PTC1YDL006W MKK1P32490 508 aa3.88□□□□□ -1.79
PTC1YDL006W VPS51P36116 164 aa3.88□□□□□ -1.79
PTC1YDL006W ADH5P38113 351 aaKnown RBP3.88□□□□□ -1.79
PTC1YDL006W BIG1P38813 335 aa3.88□□□□□ -1.79
PTC1YDL006W GVP36P40531 326 aaKnown RBP3.88□□□□□ -1.79
PTC1YDL006W YGR201CP42936 225 aa3.88□□□□□ -1.79
PTC1YDL006W AGP3P43548 558 aa3.88□□□□□ -1.79
PTC1YDL006W FAR7P43592 221 aa3.88□□□□□ -1.79
PTC1YDL006W NRM1P53718 249 aa3.88□□□□□ -1.79
PTC1YDL006W DTD1Q07648 150 aaKnown RBP3.88□□□□□ -1.79
PTC1YDL006W GLE1Q12315 538 aa3.88□□□□□ -1.79
PTC1YDL006W JID1Q12350 301 aa3.88□□□□□ -1.79
PTC1YDL006W EAF3Q12432 401 aa3.88□□□□□ -1.79
PTC1YDL006W PIS1P06197 220 aaKnown RBP3.87□□□□□ -1.79
PTC1YDL006W NAM2P11325 894 aa3.87□□□□□ -1.79
PTC1YDL006W MSI1P13712 422 aa3.87□□□□□ -1.79
PTC1YDL006W FAR1P21268 830 aa3.87□□□□□ -1.79
PTC1YDL006W LHP1P33399 275 aaKnown RBP3.87□□□□□ -1.79
PTC1YDL006W RIO2P40160 425 aaKnown RBP3.87□□□□□ -1.79
PTC1YDL006W PDS1P40316 373 aaPredicted RBP3.87□□□□□ -1.79
PTC1YDL006W CDH1P53197 566 aa3.87□□□□□ -1.79
PTC1YDL006W YMR310CQ04867 317 aaPredicted RBP3.87□□□□□ -1.79
PTC1YDL006W PET9P18239 318 aaKnown RBP3.86□□□□□ -1.79
PTC1YDL006W DAL82P21705 255 aa3.86□□□□□ -1.79
PTC1YDL006W YHK8P38776 514 aa3.86□□□□□ -1.79
PTC1YDL006W TRR2P38816 342 aa3.86□□□□□ -1.79
PTC1YDL006W MPM1P40364 252 aa3.86□□□□□ -1.79
PTC1YDL006W YIL086CP40503 102 aa3.86□□□□□ -1.79
PTC1YDL006W APS3P47064 194 aa3.86□□□□□ -1.79
PTC1YDL006W AIM24P47127 394 aa3.86□□□□□ -1.79
PTC1YDL006W YJR085CP47131 105 aaKnown RBP3.86□□□□□ -1.79
PTC1YDL006W IGO1P53897 168 aa3.86□□□□□ -1.79
PTC1YDL006W YPR172WQ06608 200 aa3.86□□□□□ -1.79
PTC1YDL006W YPR091CQ06833 770 aa3.86□□□□□ -1.79
PTC1YDL006W YDL114WQ07530 308 aa3.86□□□□□ -1.79
PTC1YDL006W NFI1Q12216 726 aa3.86□□□□□ -1.79
PTC1YDL006W MRX4Q12467 430 aa3.86□□□□□ -1.79
PTC1YDL006W TEL1P38110 2787 aa3.86□□□□□ -1.79
PTC1YDL006W SEN1Q00416 2231 aaKnown RBP3.86□□□□□ -1.79
PTC1YDL006W ADH2P00331 348 aaKnown RBP3.85□□□□□ -1.79
PTC1YDL006W ASF2P32448 525 aaPredicted RBP3.85□□□□□ -1.79
PTC1YDL006W RPS27AP35997 82 aaKnown RBP3.85□□□□□ -1.79
PTC1YDL006W YOR062CP36025 268 aa3.85□□□□□ -1.79
PTC1YDL006W FES1P38260 290 aa3.85□□□□□ -1.79
PTC1YDL006W RPS27BP38711 82 aa3.85□□□□□ -1.79
PTC1YDL006W YRB2P40517 327 aa3.85□□□□□ -1.79
PTC1YDL006W RPA34P47006 233 aaPredicted RBP3.85□□□□□ -1.79
PTC1YDL006W LCB3P47013 409 aa3.85□□□□□ -1.79
PTC1YDL006W EMC2P47133 292 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms