RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W RPR2P40571 144 aa2.12□□□□□ -2.07
VPS41YDR080W GAB1P41733 394 aa2.12□□□□□ -2.07
VPS41YDR080W YHC3P47040 408 aa2.12□□□□□ -2.07
VPS41YDR080W YGR126WP53274 230 aa2.12□□□□□ -2.07
VPS41YDR080W NAT4Q04751 285 aa2.12□□□□□ -2.07
VPS41YDR080W RTC5Q12108 567 aaKnown RBP2.12□□□□□ -2.07
VPS41YDR080W ERG27Q12452 347 aaKnown RBP2.12□□□□□ -2.07
VPS41YDR080W YAL064W-BO13512 126 aa2.12□□□□□ -2.07
VPS41YDR080W DEP1P31385 405 aa2.12□□□□□ -2.07
VPS41YDR080W MSN4P33749 630 aa2.12□□□□□ -2.07
VPS41YDR080W ROT2P38138 954 aa2.12□□□□□ -2.07
VPS41YDR080W YER084WP40057 128 aa2.12□□□□□ -2.07
VPS41YDR080W YER121WP40076 114 aa2.12□□□□□ -2.07
VPS41YDR080W JEM1P40358 645 aa2.12□□□□□ -2.07
VPS41YDR080W YDL186WP48568 277 aa2.12□□□□□ -2.07
VPS41YDR080W YIP5P53108 310 aa2.12□□□□□ -2.07
VPS41YDR080W BIO4P53630 237 aa2.12□□□□□ -2.07
VPS41YDR080W BOR1P53838 576 aa2.12□□□□□ -2.07
VPS41YDR080W TVP15Q03860 143 aa2.12□□□□□ -2.07
VPS41YDR080W SIA1Q12212 622 aa2.12□□□□□ -2.07
VPS41YDR080W JLP1Q12358 412 aa2.12□□□□□ -2.07
VPS41YDR080W SAS5Q99314 248 aa2.12□□□□□ -2.07
VPS41YDR080W YLR302CO13544 120 aa2.11□□□□□ -2.07
VPS41YDR080W YBR085C-AO43137 85 aa2.11□□□□□ -2.07
VPS41YDR080W DST1P07273 309 aa2.11□□□□□ -2.07
VPS41YDR080W ZWF1P11412 505 aaKnown RBP2.11□□□□□ -2.07
VPS41YDR080W EXG1P23776 448 aaKnown RBP2.11□□□□□ -2.07
VPS41YDR080W PDB1P32473 366 aaKnown RBP2.11□□□□□ -2.07
VPS41YDR080W NUP2P32499 720 aa2.11□□□□□ -2.07
VPS41YDR080W VMA11P32842 164 aa2.11□□□□□ -2.07
VPS41YDR080W ECM14P38836 430 aa2.11□□□□□ -2.07
VPS41YDR080W YER184CP39961 794 aa2.11□□□□□ -2.07
VPS41YDR080W GLR1P41921 483 aaKnown RBP2.11□□□□□ -2.07
VPS41YDR080W CAK1P43568 368 aaPredicted RBP2.11□□□□□ -2.07
VPS41YDR080W LIA1P47120 325 aaKnown RBP2.11□□□□□ -2.07
VPS41YDR080W UPF3P48412 387 aaKnown RBP2.11□□□□□ -2.07
VPS41YDR080W SCS7Q03529 384 aa2.11□□□□□ -2.07
VPS41YDR080W YDR387CQ04162 555 aa2.11□□□□□ -2.07
VPS41YDR080W GAT3Q07928 141 aa2.11□□□□□ -2.07
VPS41YDR080W CSI2Q08054 341 aa2.11□□□□□ -2.07
VPS41YDR080W BRX1Q08235 291 aaKnown RBP2.11□□□□□ -2.07
VPS41YDR080W FCY22Q12119 530 aa2.11□□□□□ -2.07
VPS41YDR080W IZH2Q12442 317 aa2.11□□□□□ -2.07
VPS41YDR080W TOA1P32773 286 aa2.11□□□□□ -2.07
VPS41YDR080W CLB6P32943 380 aa2.11□□□□□ -2.07
VPS41YDR080W GPX1P36014 167 aa2.11□□□□□ -2.07
VPS41YDR080W YHR180WP38868 163 aa2.11□□□□□ -2.07
VPS41YDR080W MLH1P38920 769 aa2.11□□□□□ -2.07
VPS41YDR080W MNN9P39107 395 aaKnown RBP2.11□□□□□ -2.07
VPS41YDR080W DIM1P41819 318 aaKnown RBP2.11□□□□□ -2.07
VPS41YDR080W YGL235WP53071 178 aa2.11□□□□□ -2.07
VPS41YDR080W MPP6P53725 186 aaPredicted RBP2.11□□□□□ -2.07
VPS41YDR080W YMR279CQ03263 540 aa2.11□□□□□ -2.07
VPS41YDR080W YDR415CQ04033 374 aaPredicted RBP2.11□□□□□ -2.07
VPS41YDR080W CDC8P00572 216 aa2.1□□□□□ -2.07
VPS41YDR080W CAM1P29547 415 aaKnown RBP2.1□□□□□ -2.07
VPS41YDR080W AGA1P32323 725 aa2.1□□□□□ -2.07
VPS41YDR080W LAS1P36146 502 aaPredicted RBP2.1□□□□□ -2.07
VPS41YDR080W GPI18P38211 433 aa2.1□□□□□ -2.07
VPS41YDR080W SDS24P38314 527 aa2.1□□□□□ -2.07
VPS41YDR080W SMM1P53720 384 aaKnown RBP2.1□□□□□ -2.07
VPS41YDR080W RIM9Q04734 239 aa2.1□□□□□ -2.07
VPS41YDR080W SYO1Q07395 620 aa2.1□□□□□ -2.07
VPS41YDR080W YLR053CQ12026 108 aa2.1□□□□□ -2.07
VPS41YDR080W APC2Q12440 853 aa2.1□□□□□ -2.07
VPS41YDR080W NOT5Q12514 560 aaPredicted RBP2.1□□□□□ -2.07
VPS41YDR080W DBP3P20447 523 aaKnown RBP2.1□□□□□ -2.07
VPS41YDR080W RPS1BP23248 255 aaKnown RBP2.1□□□□□ -2.07
VPS41YDR080W MCM10P32354 571 aa2.1□□□□□ -2.07
VPS41YDR080W SWH1P35845 1188 aa2.1□□□□□ -2.07
VPS41YDR080W AVT5P38176 459 aa2.1□□□□□ -2.07
VPS41YDR080W DDI1P40087 428 aa2.1□□□□□ -2.07
VPS41YDR080W YFR054CP43622 192 aa2.1□□□□□ -2.07
VPS41YDR080W MSS11Q03825 758 aa2.1□□□□□ -2.07
VPS41YDR080W YOR343CQ12484 108 aa2.1□□□□□ -2.07
VPS41YDR080W RAS2P01120 322 aaKnown RBP2.1□□□□□ -2.07
VPS41YDR080W GFD2P25370 566 aaKnown RBP2.1□□□□□ -2.07
VPS41YDR080W POL4P25615 582 aa2.1□□□□□ -2.07
VPS41YDR080W SSE2P32590 693 aaKnown RBP2.1□□□□□ -2.07
VPS41YDR080W SIP2P34164 415 aaKnown RBP2.1□□□□□ -2.07
VPS41YDR080W ECM15P35195 104 aa2.1□□□□□ -2.07
VPS41YDR080W CUE1P38428 203 aa2.1□□□□□ -2.07
VPS41YDR080W SGN1P40561 250 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
VPS41YDR080W PTR3P43606 678 aa2.1□□□□□ -2.07
VPS41YDR080W FAR3P46671 204 aa2.1□□□□□ -2.07
VPS41YDR080W RSM23Q01163 450 aa2.1□□□□□ -2.07
VPS41YDR080W RSN1Q03516 953 aa2.1□□□□□ -2.07
VPS41YDR080W PRP11Q07350 266 aaPredicted RBP2.1□□□□□ -2.07
VPS41YDR080W APC9Q12107 265 aa2.1□□□□□ -2.07
VPS41YDR080W SFM1Q12314 213 aa2.1□□□□□ -2.07
VPS41YDR080W NKP1Q12493 238 aa2.1□□□□□ -2.07
VPS41YDR080W ZTA1P38230 334 aaKnown RBP2.09□□□□□ -2.07
VPS41YDR080W BUR6P40096 142 aa2.09□□□□□ -2.07
VPS41YDR080W SMX2P40204 77 aaKnown RBP2.09□□□□□ -2.07
VPS41YDR080W YNL010WP53981 241 aaKnown RBP2.09□□□□□ -2.07
VPS41YDR080W INP1Q03694 420 aa2.09□□□□□ -2.07
VPS41YDR080W YPR127WQ06494 345 aa2.09□□□□□ -2.07
VPS41YDR080W GRC3Q07845 632 aa2.09□□□□□ -2.07
VPS41YDR080W RAD52P06778 471 aaKnown RBP2.09□□□□□ -2.08
VPS41YDR080W CLG1P35190 452 aa2.09□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms