RNA–Protein interactions for RNA: YBR160W

CDC28, Transcript of Cyclin-dependent kinase (CDK) catalytic subunit, yeastyeast

Gene CDC28, Length 897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC28YBR160W SEC13Q04491 297 aaKnown RBP4.47□□□□□ -1.69
CDC28YBR160W MRI1Q06489 411 aaKnown RBP4.47□□□□□ -1.69
CDC28YBR160W YPD1Q07688 167 aa4.47□□□□□ -1.69
CDC28YBR160W GRC3Q07845 632 aa4.47□□□□□ -1.69
CDC28YBR160W SDO1Q07953 250 aaKnown RBP4.47□□□□□ -1.69
CDC28YBR160W YPQ1Q12010 308 aa4.47□□□□□ -1.69
CDC28YBR160W SPC3Q12133 184 aa4.47□□□□□ -1.69
CDC28YBR160W AHC1Q12433 566 aa4.47□□□□□ -1.69
CDC28YBR160W ISN1Q99312 450 aa4.47□□□□□ -1.69
CDC28YBR160W MSB2P32334 1306 aa4.46□□□□□ -1.69
CDC28YBR160W HOM2P13663 365 aaKnown RBP4.46□□□□□ -1.7
CDC28YBR160W ADK2P26364 225 aa4.46□□□□□ -1.7
CDC28YBR160W RFA2P26754 273 aaKnown RBP4.46□□□□□ -1.7
CDC28YBR160W NTH1P32356 751 aa4.46□□□□□ -1.7
CDC28YBR160W YBL010CP32788 280 aa4.46□□□□□ -1.7
CDC28YBR160W ECM15P35195 104 aa4.46□□□□□ -1.7
CDC28YBR160W SFK1P35735 353 aa4.46□□□□□ -1.7
CDC28YBR160W GMH1P36125 273 aa4.46□□□□□ -1.7
CDC28YBR160W YPC1P38298 316 aa4.46□□□□□ -1.7
CDC28YBR160W ERV15P38312 142 aa4.46□□□□□ -1.7
CDC28YBR160W MTC4P38335 694 aaKnown RBP4.46□□□□□ -1.7
CDC28YBR160W DED81P38707 554 aaKnown RBP4.46□□□□□ -1.7
CDC28YBR160W ARO9P38840 513 aaPredicted RBP4.46□□□□□ -1.7
CDC28YBR160W HRB1P38922 454 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
CDC28YBR160W AIM2P39721 246 aa4.46□□□□□ -1.7
CDC28YBR160W RMD6P39975 231 aa4.46□□□□□ -1.7
CDC28YBR160W SMB1P40018 196 aaKnown RBP4.46□□□□□ -1.7
CDC28YBR160W YNL195CP40168 261 aa4.46□□□□□ -1.7
CDC28YBR160W YIL161WP40449 235 aaKnown RBP4.46□□□□□ -1.7
CDC28YBR160W POG1P40473 351 aa4.46□□□□□ -1.7
CDC28YBR160W APQ12P40532 138 aa4.46□□□□□ -1.7
CDC28YBR160W MAD2P40958 196 aa4.46□□□□□ -1.7
CDC28YBR160W PAM16P42949 149 aa4.46□□□□□ -1.7
CDC28YBR160W QRI1P43123 477 aaKnown RBP4.46□□□□□ -1.7
CDC28YBR160W YFR020WP43600 232 aa4.46□□□□□ -1.7
CDC28YBR160W MOG1P47123 218 aa4.46□□□□□ -1.7
CDC28YBR160W SRB7P47822 140 aa4.46□□□□□ -1.7
CDC28YBR160W RAD17P48581 401 aa4.46□□□□□ -1.7
CDC28YBR160W CSL4P53859 292 aaPredicted RBP4.46□□□□□ -1.7
CDC28YBR160W RVB1Q03940 463 aaKnown RBP4.46□□□□□ -1.7
CDC28YBR160W YMR252CQ04814 134 aa4.46□□□□□ -1.7
CDC28YBR160W MDM30Q05930 598 aa4.46□□□□□ -1.7
CDC28YBR160W YPR172WQ06608 200 aa4.46□□□□□ -1.7
CDC28YBR160W TMS1Q12116 473 aa4.46□□□□□ -1.7
CDC28YBR160W SUT2Q12286 268 aa4.46□□□□□ -1.7
CDC28YBR160W RRI1Q12468 440 aa4.46□□□□□ -1.7
CDC28YBR160W PRM4Q12498 284 aa4.46□□□□□ -1.7
CDC28YBR160W YDL007C-AQ2V2Q0 85 aa4.46□□□□□ -1.7
CDC28YBR160W YKL033W-AQ86ZR7 236 aa4.46□□□□□ -1.7
CDC28YBR160W ARF2P19146 181 aaKnown RBP4.45□□□□□ -1.7
CDC28YBR160W ZRC1P20107 442 aa4.45□□□□□ -1.7
CDC28YBR160W PUT3P25502 979 aaPredicted RBP4.45□□□□□ -1.7
CDC28YBR160W FUN19P28003 413 aaPredicted RBP4.45□□□□□ -1.7
CDC28YBR160W MRP20P32387 263 aa4.45□□□□□ -1.7
CDC28YBR160W ORC2P32833 620 aa4.45□□□□□ -1.7
CDC28YBR160W DOA1P36037 715 aa4.45□□□□□ -1.7
CDC28YBR160W PRS3P38689 320 aaKnown RBP4.45□□□□□ -1.7
CDC28YBR160W YHR097CP38809 366 aaKnown RBP4.45□□□□□ -1.7
CDC28YBR160W FMO1P38866 432 aa4.45□□□□□ -1.7
CDC28YBR160W LNP1P38878 278 aa4.45□□□□□ -1.7
CDC28YBR160W GET2P40056 285 aa4.45□□□□□ -1.7
CDC28YBR160W SMK1P41808 388 aa4.45□□□□□ -1.7
CDC28YBR160W IDP2P41939 412 aa4.45□□□□□ -1.7
CDC28YBR160W COS12P53053 380 aa4.45□□□□□ -1.7
CDC28YBR160W SMX3P54999 86 aaPredicted RBP4.45□□□□□ -1.7
CDC28YBR160W YCL001W-AP87012 153 aa4.45□□□□□ -1.7
CDC28YBR160W NOC4Q06512 552 aaPredicted RBP4.45□□□□□ -1.7
CDC28YBR160W CYK3Q07533 885 aa4.45□□□□□ -1.7
CDC28YBR160W CRT10Q08226 957 aa4.45□□□□□ -1.7
CDC28YBR160W EAF3Q12432 401 aa4.45□□□□□ -1.7
CDC28YBR160W PHO2P07269 559 aa4.44□□□□□ -1.7
CDC28YBR160W CHO1P08456 276 aa4.44□□□□□ -1.7
CDC28YBR160W PRB1P09232 635 aa4.44□□□□□ -1.7
CDC28YBR160W MCK1P21965 375 aaKnown RBP4.44□□□□□ -1.7
CDC28YBR160W SEC22P22214 214 aa4.44□□□□□ -1.7
CDC28YBR160W POT1P27796 417 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
CDC28YBR160W VMA5P31412 392 aaKnown RBP4.44□□□□□ -1.7
CDC28YBR160W ERG24P32462 438 aaKnown RBP4.44□□□□□ -1.7
CDC28YBR160W SIP1P32578 815 aa4.44□□□□□ -1.7
CDC28YBR160W MGM101P32787 269 aaKnown RBP4.44□□□□□ -1.7
CDC28YBR160W VAM7P32912 316 aa4.44□□□□□ -1.7
CDC28YBR160W GIM4P40005 111 aaKnown RBP4.44□□□□□ -1.7
CDC28YBR160W BUD8P41698 603 aa4.44□□□□□ -1.7
CDC28YBR160W AGX1P43567 385 aa4.44□□□□□ -1.7
CDC28YBR160W ALK1P43633 760 aaKnown RBP4.44□□□□□ -1.7
CDC28YBR160W UBX6P47049 396 aa4.44□□□□□ -1.7
CDC28YBR160W MCM22P47167 239 aa4.44□□□□□ -1.7
CDC28YBR160W PUS4P48567 403 aaKnown RBP4.44□□□□□ -1.7
CDC28YBR160W YGL204CP53089 101 aa4.44□□□□□ -1.7
CDC28YBR160W PEF1P53238 335 aa4.44□□□□□ -1.7
CDC28YBR160W VHT1P53241 593 aa4.44□□□□□ -1.7
CDC28YBR160W FMP41P53889 259 aaKnown RBP4.44□□□□□ -1.7
CDC28YBR160W RHO4Q00246 291 aa4.44□□□□□ -1.7
CDC28YBR160W MSC1Q03104 513 aa4.44□□□□□ -1.7
CDC28YBR160W YMR178WQ03219 274 aaKnown RBP4.44□□□□□ -1.7
CDC28YBR160W YPR091CQ06833 770 aa4.44□□□□□ -1.7
CDC28YBR160W REX4Q08237 289 aa4.44□□□□□ -1.7
CDC28YBR160W RRP40Q08285 240 aaKnown RBP4.44□□□□□ -1.7
CDC28YBR160W RTK1Q12100 620 aaPredicted RBP4.44□□□□□ -1.7
CDC28YBR160W YDL211CQ12121 372 aa4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 48.8 ms