RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeastyeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE4YOR035C YIL177CP40434 1758 aa2.01□□□□□ -2.09
SHE4YOR035C YJL225CP40889 1758 aa2.01□□□□□ -2.09
SHE4YOR035C FAS2P19097 1887 aaKnown RBP2.01□□□□□ -2.09
SHE4YOR035C RPB9P27999 122 aa2.01□□□□□ -2.09
SHE4YOR035C YKL162CP36052 402 aa2.01□□□□□ -2.09
SHE4YOR035C INA22P40576 216 aa2.01□□□□□ -2.09
SHE4YOR035C CAB5Q03941 241 aa2.01□□□□□ -2.09
SHE4YOR035C DIB1Q06819 143 aaPredicted RBP2.01□□□□□ -2.09
SHE4YOR035C BI3Q9ZZW7 517 aa2.01□□□□□ -2.09
SHE4YOR035C STF1P01098 86 aa2□□□□□ -2.09
SHE4YOR035C SWC5P38326 303 aa2□□□□□ -2.09
SHE4YOR035C POP2P39008 433 aa2□□□□□ -2.09
SHE4YOR035C SSO2P39926 295 aa2□□□□□ -2.09
SHE4YOR035C COS4P43542 379 aa2□□□□□ -2.09
SHE4YOR035C SNX41Q04053 625 aa2□□□□□ -2.09
SHE4YOR035C UBX2Q04228 584 aa2□□□□□ -2.09
SHE4YOR035C VTI1Q04338 217 aa2□□□□□ -2.09
SHE4YOR035C MGR3Q04472 501 aa2□□□□□ -2.09
SHE4YOR035C TRM10Q12400 293 aa2□□□□□ -2.09
SHE4YOR035C TY3B-IQ7LHG5 1498 aaKnown RBP2□□□□□ -2.09
SHE4YOR035C INO2P26798 304 aa2□□□□□ -2.09
SHE4YOR035C IME2P32581 645 aa2□□□□□ -2.09
SHE4YOR035C SUR1P33300 382 aa2□□□□□ -2.09
SHE4YOR035C YHR035WP38769 630 aa2□□□□□ -2.09
SHE4YOR035C YNR066CP53752 436 aa2□□□□□ -2.09
SHE4YOR035C ABZ2Q03266 374 aa2□□□□□ -2.09
SHE4YOR035C VPS20Q04272 221 aa2□□□□□ -2.09
SHE4YOR035C VIK1Q12045 647 aa2□□□□□ -2.09
SHE4YOR035C UTP23Q12339 254 aaKnown RBP2□□□□□ -2.09
SHE4YOR035C CBP2P03874 630 aaPredicted RBP1.99□□□□□ -2.09
SHE4YOR035C FET3P38993 636 aa1.99□□□□□ -2.09
SHE4YOR035C SOP4P39543 234 aaPredicted RBP1.99□□□□□ -2.09
SHE4YOR035C PBP4Q07362 185 aaKnown RBP1.99□□□□□ -2.09
SHE4YOR035C PRP46Q12417 451 aaPredicted RBP1.99□□□□□ -2.09
SHE4YOR035C SEN1Q00416 2231 aaKnown RBP1.99□□□□□ -2.09
SHE4YOR035C PET18P25362 215 aa1.99□□□□□ -2.09
SHE4YOR035C SLX1P38324 304 aa1.99□□□□□ -2.09
SHE4YOR035C OKP1P53298 406 aa1.99□□□□□ -2.09
SHE4YOR035C KRR1P25586 316 aaPredicted RBP1.98□□□□□ -2.09
SHE4YOR035C ASP1P38986 381 aaPredicted RBP1.98□□□□□ -2.09
SHE4YOR035C YGR266WP53326 701 aa1.98□□□□□ -2.09
SHE4YOR035C REX3Q12090 404 aa1.98□□□□□ -2.09
SHE4YOR035C PAA1Q12447 191 aaKnown RBP1.98□□□□□ -2.09
SHE4YOR035C LAG2Q92325 660 aa1.98□□□□□ -2.09
SHE4YOR035C YFL040WP43562 540 aa1.98□□□□□ -2.09
SHE4YOR035C PRO2P54885 456 aaKnown RBP1.98□□□□□ -2.09
SHE4YOR035C YMR111CQ04461 462 aaPredicted RBP1.98□□□□□ -2.09
SHE4YOR035C RTC5Q12108 567 aaKnown RBP1.98□□□□□ -2.09
SHE4YOR035C UTP20P35194 2493 aaKnown RBP1.97□□□□□ -2.09
SHE4YOR035C FMP27Q06179 2628 aa1.97□□□□□ -2.09
SHE4YOR035C OSW5P40219 148 aa1.97□□□□□ -2.09
SHE4YOR035C IZH4Q99393 312 aa1.97□□□□□ -2.09
SHE4YOR035C PRP8P33334 2413 aaKnown RBP1.97□□□□□ -2.09
SHE4YOR035C TDH3P00359 332 aaKnown RBP RIP-Chip data1.96□□□□□ -2.09not detected
SHE4YOR035C CAR2P07991 424 aaKnown RBP1.96□□□□□ -2.09
SHE4YOR035C YDR089WP38966 869 aa1.96□□□□□ -2.09
SHE4YOR035C EDC2P40023 145 aaPredicted RBP1.96□□□□□ -2.09
SHE4YOR035C RPN14P53196 417 aa1.96□□□□□ -2.09
SHE4YOR035C SEC13Q04491 297 aaKnown RBP1.96□□□□□ -2.09
SHE4YOR035C YOR292CQ08743 309 aa1.96□□□□□ -2.09
SHE4YOR035C FIG2P25653 1609 aa1.96□□□□□ -2.1
SHE4YOR035C TY4B-HP0C2J7 1802 aa1.96□□□□□ -2.1
SHE4YOR035C TY4B-JP47024 1803 aa1.96□□□□□ -2.1
SHE4YOR035C RAD7P06779 565 aa1.96□□□□□ -2.1
SHE4YOR035C RPS23AP0CX29 145 aaKnown RBP1.96□□□□□ -2.1
SHE4YOR035C RPS23BP0CX30 145 aa1.96□□□□□ -2.1
SHE4YOR035C RIB4P50861 169 aaPredicted RBP1.96□□□□□ -2.1
SHE4YOR035C SWC4P53201 476 aa1.96□□□□□ -2.1
SHE4YOR035C DBP6P53734 629 aaKnown RBP1.96□□□□□ -2.1
SHE4YOR035C ERP3Q12403 225 aa1.96□□□□□ -2.1
SHE4YOR035C DCP1Q12517 231 aaPredicted RBP1.96□□□□□ -2.1
SHE4YOR035C RIM15P43565 1770 aa1.96□□□□□ -2.1
SHE4YOR035C GCD2P12754 651 aaPredicted RBP1.95□□□□□ -2.1
SHE4YOR035C RPL16BP26785 198 aaKnown RBP1.95□□□□□ -2.1
SHE4YOR035C MRPL6P32904 214 aa1.95□□□□□ -2.1
SHE4YOR035C GPX1P36014 167 aa1.95□□□□□ -2.1
SHE4YOR035C SWD2P36104 329 aaPredicted RBP1.95□□□□□ -2.1
SHE4YOR035C YPC1P38298 316 aa1.95□□□□□ -2.1
SHE4YOR035C ECM14P38836 430 aa1.95□□□□□ -2.1
SHE4YOR035C SHC1P39000 512 aa1.95□□□□□ -2.1
SHE4YOR035C YIL012WP40551 113 aa1.95□□□□□ -2.1
SHE4YOR035C CSI1Q04368 295 aa1.95□□□□□ -2.1
SHE4YOR035C YLR446WQ06204 433 aa1.95□□□□□ -2.1
SHE4YOR035C YPL264CQ08980 353 aa1.95□□□□□ -2.1
SHE4YOR035C YPL278CQ08990 100 aa1.95□□□□□ -2.1
SHE4YOR035C IES3Q12345 250 aa1.95□□□□□ -2.1
SHE4YOR035C MSS116P15424 664 aaKnown RBP1.95□□□□□ -2.1
SHE4YOR035C CDC13P32797 924 aaKnown RBP1.95□□□□□ -2.1
SHE4YOR035C CSE1P33307 960 aa1.95□□□□□ -2.1
SHE4YOR035C TPO5P36029 618 aa1.95□□□□□ -2.1
SHE4YOR035C AIM29P36154 155 aa1.95□□□□□ -2.1
SHE4YOR035C YBR062CP38239 180 aa1.95□□□□□ -2.1
SHE4YOR035C SPO73P40031 143 aa1.95□□□□□ -2.1
SHE4YOR035C VOA1P53262 265 aa1.95□□□□□ -2.1
SHE4YOR035C YNL040WP53960 456 aaPredicted RBP1.95□□□□□ -2.1
SHE4YOR035C YDR222WQ04925 415 aa1.95□□□□□ -2.1
SHE4YOR035C ARC18Q05933 178 aaKnown RBP1.95□□□□□ -2.1
SHE4YOR035C APC9Q12107 265 aa1.95□□□□□ -2.1
SHE4YOR035C MDY2Q12285 212 aa1.95□□□□□ -2.1
SHE4YOR035C PFK27Q12471 397 aaPredicted RBP1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms