RNA–Protein interactions for RNA: YNL006W

LST8, Transcript of Protein required for the transport of Gap1p, yeast

Gene LST8, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LST8	YNL006W	GRC3	Q07845	632 aa		4.94	□□□□□ -1.62
LST8	YNL006W	HNT3	Q08702	217 aa		4.94	□□□□□ -1.62
LST8	YNL006W	GRE1	Q08969	168 aa		4.94	□□□□□ -1.62
LST8	YNL006W	YDL180W	Q12301	547 aa		4.94	□□□□□ -1.62
LST8	YNL006W	PEP4	P07267	405 aa	Known RBP	4.93	□□□□□ -1.62
LST8	YNL006W	FBA1	P14540	359 aa	Known RBP	4.93	□□□□□ -1.62
LST8	YNL006W	SNF6	P18888	332 aa		4.93	□□□□□ -1.62
LST8	YNL006W	CPR2	P23285	205 aa		4.93	□□□□□ -1.62
LST8	YNL006W	PCL1	P24867	279 aa		4.93	□□□□□ -1.62
LST8	YNL006W	BUD5	P25300	642 aa	Predicted RBP	4.93	□□□□□ -1.62
LST8	YNL006W	RRP7	P25368	297 aa	Predicted RBP	4.93	□□□□□ -1.62
LST8	YNL006W	POL4	P25615	582 aa		4.93	□□□□□ -1.62
LST8	YNL006W	SBE22	P38814	852 aa		4.93	□□□□□ -1.62
LST8	YNL006W	RRG9	P40156	214 aa		4.93	□□□□□ -1.62
LST8	YNL006W	SNL1	P40548	159 aa		4.93	□□□□□ -1.62
LST8	YNL006W	FAR7	P43592	221 aa		4.93	□□□□□ -1.62
LST8	YNL006W	PCP1	P53259	346 aa		4.93	□□□□□ -1.62
LST8	YNL006W	ABZ2	Q03266	374 aa		4.93	□□□□□ -1.62
LST8	YNL006W	SMP3	Q04174	516 aa		4.93	□□□□□ -1.62
LST8	YNL006W	MRPL1	Q04599	285 aa		4.93	□□□□□ -1.62
LST8	YNL006W	ELP6	Q04868	273 aa		4.93	□□□□□ -1.62
LST8	YNL006W	SNT309	Q06091	175 aa	Predicted RBP	4.93	□□□□□ -1.62
LST8	YNL006W	NDL1	Q06568	189 aa		4.93	□□□□□ -1.62
LST8	YNL006W	UIP4	Q08926	304 aa		4.93	□□□□□ -1.62
LST8	YNL006W	SET6	Q12529	373 aa		4.93	□□□□□ -1.62
LST8	YNL006W	YDL007C-A	Q2V2Q0	85 aa		4.93	□□□□□ -1.62
LST8	YNL006W	YHR214C-E	Q8TGK0	99 aa		4.93	□□□□□ -1.62
LST8	YNL006W	SEC12	P11655	471 aa		4.92	□□□□□ -1.62
LST8	YNL006W	GIT1	P25346	518 aa		4.92	□□□□□ -1.62
LST8	YNL006W	ASF2	P32448	525 aa	Predicted RBP	4.92	□□□□□ -1.62
LST8	YNL006W	MSN4	P33749	630 aa		4.92	□□□□□ -1.62
LST8	YNL006W	MRPS5	P33759	307 aa		4.92	□□□□□ -1.62
LST8	YNL006W	GPX1	P36014	167 aa		4.92	□□□□□ -1.62
LST8	YNL006W	ECM8	P38246	354 aa		4.92	□□□□□ -1.62
LST8	YNL006W	YGP1	P38616	354 aa	Known RBP	4.92	□□□□□ -1.62
LST8	YNL006W	RPS20	P38701	121 aa	Known RBP	4.92	□□□□□ -1.62
LST8	YNL006W	SSZ1	P38788	538 aa	Known RBP	4.92	□□□□□ -1.62
LST8	YNL006W	GDI1	P39958	451 aa	Known RBP	4.92	□□□□□ -1.62
LST8	YNL006W	ISC1	P40015	477 aa	Known RBP	4.92	□□□□□ -1.62
LST8	YNL006W	THO1	P40040	218 aa	Known RBP	4.92	□□□□□ -1.62
LST8	YNL006W	SDP1	P40479	209 aa		4.92	□□□□□ -1.62
LST8	YNL006W	IDP2	P41939	412 aa		4.92	□□□□□ -1.62
LST8	YNL006W	CHA4	P43634	648 aa		4.92	□□□□□ -1.62
LST8	YNL006W	SSY5	P47002	699 aa		4.92	□□□□□ -1.62
LST8	YNL006W	RRN9	P53437	365 aa		4.92	□□□□□ -1.62
LST8	YNL006W	GRX5	Q02784	150 aa		4.92	□□□□□ -1.62
LST8	YNL006W	HOT1	Q03213	719 aa		4.92	□□□□□ -1.62
LST8	YNL006W	CTS2	Q06350	511 aa		4.92	□□□□□ -1.62
LST8	YNL006W	RRP9	Q06506	573 aa	Known RBP	4.92	□□□□□ -1.62
LST8	YNL006W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
LST8	YNL006W	NIP7	Q08962	181 aa	Known RBP	4.92	□□□□□ -1.62
LST8	YNL006W	RTN2	Q12443	393 aa		4.92	□□□□□ -1.62
LST8	YNL006W	ATR1	P13090	542 aa		4.91	□□□□□ -1.62
LST8	YNL006W	DPM1	P14020	267 aa	Known RBP	4.91	□□□□□ -1.62
LST8	YNL006W	SED4	P25365	1065 aa		4.91	□□□□□ -1.62
LST8	YNL006W	VPH2	P32341	215 aa		4.91	□□□□□ -1.62
LST8	YNL006W	HIS7	P33734	552 aa	Known RBP	4.91	□□□□□ -1.62
LST8	YNL006W	FAT1	P38225	669 aa		4.91	□□□□□ -1.62
LST8	YNL006W	SIC1	P38634	284 aa		4.91	□□□□□ -1.62
LST8	YNL006W	ARN2	P38724	620 aa		4.91	□□□□□ -1.62
LST8	YNL006W	YHL037C	P38733	133 aa		4.91	□□□□□ -1.62
LST8	YNL006W	ASI3	P53983	676 aa		4.91	□□□□□ -1.62
LST8	YNL006W	OST6	Q03723	332 aa		4.91	□□□□□ -1.62
LST8	YNL006W	ASM4	Q05166	528 aa		4.91	□□□□□ -1.62
LST8	YNL006W	UTP21	Q06078	939 aa	Predicted RBP	4.91	□□□□□ -1.62
LST8	YNL006W	TAZ1	Q06510	381 aa		4.91	□□□□□ -1.62
LST8	YNL006W	BRE4	Q07660	1125 aa		4.91	□□□□□ -1.62
LST8	YNL006W	NCE102	Q12207	173 aa	RIP-Chip data	4.91	□□□□□ -1.62	not detected
LST8	YNL006W	APC2	Q12440	853 aa		4.91	□□□□□ -1.62
LST8	YNL006W	YPL119C-A	Q3E751	87 aa		4.91	□□□□□ -1.62
LST8	YNL006W	TPK3	P05986	398 aa		4.9	□□□□□ -1.63
LST8	YNL006W	KIN28	P06242	306 aa		4.9	□□□□□ -1.63
LST8	YNL006W	NFT1	P0CE68	1218 aa		4.9	□□□□□ -1.63
LST8	YNL006W	PDA1	P16387	420 aa	Known RBP	4.9	□□□□□ -1.63
LST8	YNL006W	EXG1	P23776	448 aa	Known RBP	4.9	□□□□□ -1.63
LST8	YNL006W	YCL042W	P25572	119 aa		4.9	□□□□□ -1.63
LST8	YNL006W	CAM1	P29547	415 aa	Known RBP	4.9	□□□□□ -1.63
LST8	YNL006W	CHK1	P38147	527 aa		4.9	□□□□□ -1.63
LST8	YNL006W	GAT2	P40209	560 aa		4.9	□□□□□ -1.63
LST8	YNL006W	URM1	P40554	99 aa	Predicted RBP	4.9	□□□□□ -1.63
LST8	YNL006W	PGA1	P53896	198 aa		4.9	□□□□□ -1.63
LST8	YNL006W	RTC5	Q12108	567 aa	Known RBP	4.9	□□□□□ -1.63
LST8	YNL006W	DBP10	Q12389	995 aa	Known RBP	4.9	□□□□□ -1.63
LST8	YNL006W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
LST8	YNL006W	RIB3	Q99258	208 aa		4.9	□□□□□ -1.63
LST8	YNL006W	OPI3	P05375	206 aa		4.89	□□□□□ -1.63
LST8	YNL006W	MET2	P08465	486 aa		4.89	□□□□□ -1.63
LST8	YNL006W	YBR138C	P38277	524 aa		4.89	□□□□□ -1.63
LST8	YNL006W	CHL4	P38907	458 aa		4.89	□□□□□ -1.63
LST8	YNL006W	YER084W	P40057	128 aa		4.89	□□□□□ -1.63
LST8	YNL006W	LSM4	P40070	187 aa	Known RBP	4.89	□□□□□ -1.63
LST8	YNL006W	AVT7	P40501	490 aa		4.89	□□□□□ -1.63
LST8	YNL006W	SWP82	P43554	623 aa		4.89	□□□□□ -1.63
LST8	YNL006W	MOB2	P43563	287 aa		4.89	□□□□□ -1.63
LST8	YNL006W	EXG2	P52911	562 aa		4.89	□□□□□ -1.63
LST8	YNL006W	RMD9	P53140	646 aa	Known RBP	4.89	□□□□□ -1.63
LST8	YNL006W	YGL101W	P53144	215 aa		4.89	□□□□□ -1.63
LST8	YNL006W	NUP49	Q02199	472 aa		4.89	□□□□□ -1.63
LST8	YNL006W	SNZ1	Q03148	297 aa		4.89	□□□□□ -1.63
LST8	YNL006W	YAP6	Q03935	383 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms