RNA–Protein interactions for RNA: YHR016C

YSC84, Transcript of Actin-binding protein, yeastyeast

Gene YSC84, Length 1,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSC84YHR016C HXT2P23585 541 aa10.64□□□□□ -0.71
YSC84YHR016C PTP1P25044 335 aa10.64□□□□□ -0.71
YSC84YHR016C MDH3P32419 343 aaKnown RBP RIP-Chip data10.64□□□□□ -0.71not detected
YSC84YHR016C YKL071WP36086 256 aa10.64□□□□□ -0.71
YSC84YHR016C OCA5P38738 679 aa10.64□□□□□ -0.71
YSC84YHR016C SLS1P42900 643 aa10.64□□□□□ -0.71
YSC84YHR016C TAD2P47058 250 aa10.64□□□□□ -0.71
YSC84YHR016C YOR385WQ08909 290 aa10.64□□□□□ -0.71
YSC84YHR016C YLR108CQ12259 485 aa10.64□□□□□ -0.71
YSC84YHR016C NPC2Q12408 173 aa10.64□□□□□ -0.71
YSC84YHR016C CYR1P08678 2026 aaKnown RBP10.64□□□□□ -0.71
YSC84YHR016C SUA5P32579 426 aa10.63□□□□□ -0.71
YSC84YHR016C NRP1P32770 719 aaKnown RBP RIP-Chip data10.63□□□□□ -0.71not detected
YSC84YHR016C BET3P36149 193 aa10.63□□□□□ -0.71
YSC84YHR016C VBA2P38358 474 aaKnown RBP10.63□□□□□ -0.71
YSC84YHR016C VPS52P39904 641 aa10.63□□□□□ -0.71
YSC84YHR016C SMB1P40018 196 aaKnown RBP10.63□□□□□ -0.71
YSC84YHR016C ALB1P47019 175 aaPredicted RBP10.63□□□□□ -0.71
YSC84YHR016C YGR042WP53227 271 aa10.63□□□□□ -0.71
YSC84YHR016C LAP3Q01532 483 aaKnown RBP RIP-Chip data10.63□□□□□ -0.71not detected
YSC84YHR016C YFT2Q06676 274 aa10.63□□□□□ -0.71
YSC84YHR016C LUC7Q07508 261 aaPredicted RBP10.63□□□□□ -0.71
YSC84YHR016C REP2P03872 296 aa10.62□□□□□ -0.71
YSC84YHR016C GCD1P09032 578 aaPredicted RBP10.62□□□□□ -0.71
YSC84YHR016C HOM3P10869 527 aa10.62□□□□□ -0.71
YSC84YHR016C PAC1P39946 494 aaKnown RBP10.62□□□□□ -0.71
YSC84YHR016C GLR1P41921 483 aaKnown RBP10.62□□□□□ -0.71
YSC84YHR016C CCC1P47818 322 aa10.62□□□□□ -0.71
YSC84YHR016C NAM8Q00539 523 aaKnown RBP10.62□□□□□ -0.71
YSC84YHR016C ANT1Q06497 328 aa10.62□□□□□ -0.71
YSC84YHR016C PHO2P07269 559 aa10.61□□□□□ -0.71
YSC84YHR016C SAC7P17121 654 aa10.61□□□□□ -0.71
YSC84YHR016C EMP24P32803 203 aaKnown RBP10.61□□□□□ -0.71
YSC84YHR016C PDC2P32896 925 aa10.61□□□□□ -0.71
YSC84YHR016C MRPL36P36531 177 aa10.61□□□□□ -0.71
YSC84YHR016C YIL060WP40519 144 aa10.61□□□□□ -0.71
YSC84YHR016C LEM3P42838 414 aa10.61□□□□□ -0.71
YSC84YHR016C GTF1P53260 183 aaPredicted RBP10.61□□□□□ -0.71
YSC84YHR016C OGG1P53397 376 aaPredicted RBP10.61□□□□□ -0.71
YSC84YHR016C SWS2P53937 143 aa10.61□□□□□ -0.71
YSC84YHR016C RPP1AP05318 106 aaPredicted RBP10.6□□□□□ -0.71
YSC84YHR016C BMT5P40493 336 aa10.6□□□□□ -0.71
YSC84YHR016C TYW3P53177 273 aa10.6□□□□□ -0.71
YSC84YHR016C TDH2P00358 332 aaKnown RBP10.59□□□□□ -0.71
YSC84YHR016C CHO1P08456 276 aa10.59□□□□□ -0.71
YSC84YHR016C RPL20AP0CX23 172 aaKnown RBP10.59□□□□□ -0.71
YSC84YHR016C RPL20BP0CX24 172 aaPredicted RBP10.59□□□□□ -0.71
YSC84YHR016C MRP2P10663 115 aaPredicted RBP10.59□□□□□ -0.71
YSC84YHR016C PBN1P25580 416 aa10.59□□□□□ -0.71
YSC84YHR016C MRP20P32387 263 aa10.59□□□□□ -0.71
YSC84YHR016C MRT4P33201 236 aaKnown RBP10.59□□□□□ -0.71
YSC84YHR016C ALG3P38179 458 aa10.59□□□□□ -0.71
YSC84YHR016C CHS7P38843 316 aa10.59□□□□□ -0.71
YSC84YHR016C SYS1P41544 203 aa10.59□□□□□ -0.71
YSC84YHR016C BUD25P85052 153 aa10.59□□□□□ -0.71
YSC84YHR016C ARG5,6Q01217 863 aa10.59□□□□□ -0.71
YSC84YHR016C HRT1Q08273 121 aa10.59□□□□□ -0.71
YSC84YHR016C RDR1Q08904 546 aa10.59□□□□□ -0.71
YSC84YHR016C GAS1P22146 559 aaKnown RBP10.58□□□□□ -0.72
YSC84YHR016C CWH43P25618 953 aa10.58□□□□□ -0.72
YSC84YHR016C TRS65P32893 560 aa10.58□□□□□ -0.72
YSC84YHR016C GPX1P36014 167 aa10.58□□□□□ -0.72
YSC84YHR016C MTC4P38335 694 aaKnown RBP10.58□□□□□ -0.72
YSC84YHR016C LSM12P38828 187 aaKnown RBP10.58□□□□□ -0.72
YSC84YHR016C NSG1P38837 291 aa10.58□□□□□ -0.72
YSC84YHR016C ARO9P38840 513 aaPredicted RBP10.58□□□□□ -0.72
YSC84YHR016C OTU1P43558 301 aa10.58□□□□□ -0.72
YSC84YHR016C RSM27P53305 110 aa10.58□□□□□ -0.72
YSC84YHR016C MPP6P53725 186 aaPredicted RBP10.58□□□□□ -0.72
YSC84YHR016C CAF40P53829 373 aa10.58□□□□□ -0.72
YSC84YHR016C EGD1Q02642 157 aaKnown RBP10.58□□□□□ -0.72
YSC84YHR016C MRPL51Q06090 140 aaPredicted RBP10.58□□□□□ -0.72
YSC84YHR016C AVO1Q08236 1176 aa10.58□□□□□ -0.72
YSC84YHR016C ORT1Q12375 292 aa10.58□□□□□ -0.72
YSC84YHR016C EAF3Q12432 401 aa10.58□□□□□ -0.72
YSC84YHR016C FUR4P05316 633 aaKnown RBP10.58□□□□□ -0.72
YSC84YHR016C NUP1P20676 1076 aa10.58□□□□□ -0.72
YSC84YHR016C SEC22P22214 214 aa10.58□□□□□ -0.72
YSC84YHR016C PAD1P33751 242 aaKnown RBP RIP-Chip data10.58□□□□□ -0.72not detected
YSC84YHR016C MKS1P34072 584 aa10.58□□□□□ -0.72
YSC84YHR016C ECM31P38122 312 aa10.58□□□□□ -0.72
YSC84YHR016C COS8P38723 381 aa10.58□□□□□ -0.72
YSC84YHR016C UTP25P40498 721 aaKnown RBP10.58□□□□□ -0.72
YSC84YHR016C NCE101Q02820 53 aa10.58□□□□□ -0.72
YSC84YHR016C PRM4Q12498 284 aa10.58□□□□□ -0.72
YSC84YHR016C SET6Q12529 373 aa10.58□□□□□ -0.72
YSC84YHR016C STE50P25344 346 aa10.57□□□□□ -0.72
YSC84YHR016C MSN4P33749 630 aa10.57□□□□□ -0.72
YSC84YHR016C FLO10P36170 1169 aa10.57□□□□□ -0.72
YSC84YHR016C ELO1P39540 310 aa10.57□□□□□ -0.72
YSC84YHR016C NAS2P40555 220 aa10.57□□□□□ -0.72
YSC84YHR016C GRC3Q07845 632 aa10.57□□□□□ -0.72
YSC84YHR016C THI73Q07904 523 aa10.57□□□□□ -0.72
YSC84YHR016C RTK1Q12100 620 aaPredicted RBP10.57□□□□□ -0.72
YSC84YHR016C MATALPHA1P0CY06 175 aa10.56□□□□□ -0.72
YSC84YHR016C HMLALPHA1P0CY07 175 aa10.56□□□□□ -0.72
YSC84YHR016C NFS1P25374 497 aa10.56□□□□□ -0.72
YSC84YHR016C DBF20P32328 564 aa10.56□□□□□ -0.72
YSC84YHR016C CIS3P47001 227 aa10.56□□□□□ -0.72
YSC84YHR016C YJR111CP47148 283 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 5,963 RNA–protein pairs in 87.6 ms