RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W STB1P42845 420 aa0.91□□□□□ -2.26
SMC1YFL008W SER2P42941 309 aa0.91□□□□□ -2.26
SMC1YFL008W COS4P43542 379 aa0.91□□□□□ -2.26
SMC1YFL008W YFH7P43591 353 aa0.91□□□□□ -2.26
SMC1YFL008W LIA1P47120 325 aaKnown RBP0.91□□□□□ -2.26
SMC1YFL008W EMC2P47133 292 aaKnown RBP0.91□□□□□ -2.26
SMC1YFL008W GPI8P49018 411 aa0.91□□□□□ -2.26
SMC1YFL008W RMT2Q03305 412 aa0.91□□□□□ -2.26
SMC1YFL008W DML1Q03652 475 aa0.91□□□□□ -2.26
SMC1YFL008W VTI1Q04338 217 aa0.91□□□□□ -2.26
SMC1YFL008W MYO5Q04439 1219 aaKnown RBP0.91□□□□□ -2.26
SMC1YFL008W DIB1Q06819 143 aaPredicted RBP0.91□□□□□ -2.26
SMC1YFL008W DTD1Q07648 150 aaKnown RBP0.91□□□□□ -2.26
SMC1YFL008W ALE1Q08548 619 aa0.91□□□□□ -2.26
SMC1YFL008W CBP2P03874 630 aaPredicted RBP0.91□□□□□ -2.26
SMC1YFL008W SPT3P06844 337 aa0.91□□□□□ -2.26
SMC1YFL008W YGL041W-AP0C5N3 154 aa0.91□□□□□ -2.26
SMC1YFL008W REC107P21651 314 aa0.91□□□□□ -2.26
SMC1YFL008W DBR1P24309 405 aaKnown RBP0.91□□□□□ -2.26
SMC1YFL008W NRP1P32770 719 aaKnown RBP RIP-Chip data0.91□□□□□ -2.26not detected
SMC1YFL008W YPT52P36018 234 aaKnown RBP0.91□□□□□ -2.26
SMC1YFL008W IST2P38250 946 aa0.91□□□□□ -2.26
SMC1YFL008W SHE3P38272 425 aaKnown RBP0.91□□□□□ -2.26
SMC1YFL008W PES4P39684 611 aa0.91□□□□□ -2.26
SMC1YFL008W ATM1P40416 690 aa0.91□□□□□ -2.26
SMC1YFL008W YRB2P40517 327 aa0.91□□□□□ -2.26
SMC1YFL008W FMP33P46998 180 aa0.91□□□□□ -2.26
SMC1YFL008W YJR079WP47126 109 aa0.91□□□□□ -2.26
SMC1YFL008W TAF6P53040 516 aa0.91□□□□□ -2.26
SMC1YFL008W RPN14P53196 417 aa0.91□□□□□ -2.26
SMC1YFL008W YGR266WP53326 701 aa0.91□□□□□ -2.26
SMC1YFL008W SSU72P53538 206 aaPredicted RBP0.91□□□□□ -2.26
SMC1YFL008W MNT4P53745 580 aa0.91□□□□□ -2.26
SMC1YFL008W VHS1Q03785 461 aa0.91□□□□□ -2.26
SMC1YFL008W SLD7Q08457 257 aa0.91□□□□□ -2.26
SMC1YFL008W FYV7Q12247 151 aa0.91□□□□□ -2.26
SMC1YFL008W YOS9Q99220 542 aa0.91□□□□□ -2.26
SMC1YFL008W COS2P0CX12 379 aa0.91□□□□□ -2.26
SMC1YFL008W COS3P0CX13 379 aa0.91□□□□□ -2.26
SMC1YFL008W UNG1P12887 359 aa0.91□□□□□ -2.26
SMC1YFL008W SNA3P14359 133 aa0.91□□□□□ -2.26
SMC1YFL008W DBP3P20447 523 aaKnown RBP0.91□□□□□ -2.26
SMC1YFL008W AAT2P23542 418 aaKnown RBP0.91□□□□□ -2.26
SMC1YFL008W RDS1P25611 832 aa0.91□□□□□ -2.26
SMC1YFL008W DAL80P26343 269 aa0.91□□□□□ -2.26
SMC1YFL008W TPO5P36029 618 aa0.91□□□□□ -2.26
SMC1YFL008W PEX32P38292 413 aa0.91□□□□□ -2.26
SMC1YFL008W CTM1P38818 585 aa0.91□□□□□ -2.26
SMC1YFL008W PCL7P40186 285 aa0.91□□□□□ -2.26
SMC1YFL008W HPM1P40481 377 aa0.91□□□□□ -2.26
SMC1YFL008W MOG1P47123 218 aa0.91□□□□□ -2.26
SMC1YFL008W ADO1P47143 340 aaKnown RBP0.91□□□□□ -2.26
SMC1YFL008W ORM1P53224 222 aa0.91□□□□□ -2.26
SMC1YFL008W TIM11P81449 96 aaPredicted RBP0.91□□□□□ -2.26
SMC1YFL008W TPS1Q00764 495 aaKnown RBP0.91□□□□□ -2.26
SMC1YFL008W NDE2Q07500 545 aa0.91□□□□□ -2.26
SMC1YFL008W SLF1Q12034 447 aaKnown RBP0.91□□□□□ -2.26
SMC1YFL008W DAS2Q12084 232 aa0.91□□□□□ -2.26
SMC1YFL008W BBP1Q12365 385 aa0.91□□□□□ -2.26
SMC1YFL008W QCR7P00128 127 aa0.9□□□□□ -2.27
SMC1YFL008W RAD6P06104 172 aa0.9□□□□□ -2.27
SMC1YFL008W SCH9P11792 824 aaKnown RBP0.9□□□□□ -2.27
SMC1YFL008W FBA1P14540 359 aaKnown RBP0.9□□□□□ -2.27
SMC1YFL008W ZRC1P20107 442 aa0.9□□□□□ -2.27
SMC1YFL008W ICL1P28240 557 aaPredicted RBP0.9□□□□□ -2.27
SMC1YFL008W VMA5P31412 392 aaKnown RBP0.9□□□□□ -2.27
SMC1YFL008W RIM1P32445 135 aaKnown RBP0.9□□□□□ -2.27
SMC1YFL008W ACP1P32463 125 aa0.9□□□□□ -2.27
SMC1YFL008W SPS19P32573 292 aaKnown RBP0.9□□□□□ -2.27
SMC1YFL008W MRX3P38172 270 aa0.9□□□□□ -2.27
SMC1YFL008W SIF2P38262 535 aa0.9□□□□□ -2.27
SMC1YFL008W APE4P38821 490 aa0.9□□□□□ -2.27
SMC1YFL008W LSM12P38828 187 aaKnown RBP0.9□□□□□ -2.27
SMC1YFL008W EGD2P38879 174 aaKnown RBP0.9□□□□□ -2.27
SMC1YFL008W GIM4P40005 111 aaKnown RBP0.9□□□□□ -2.27
SMC1YFL008W YER079WP40052 210 aaKnown RBP0.9□□□□□ -2.27
SMC1YFL008W DDI1P40087 428 aa0.9□□□□□ -2.27
SMC1YFL008W WWM1P43582 211 aaKnown RBP0.9□□□□□ -2.27
SMC1YFL008W RPA34P47006 233 aaPredicted RBP0.9□□□□□ -2.27
SMC1YFL008W AIM23P47015 356 aa0.9□□□□□ -2.27
SMC1YFL008W YJR030CP47101 745 aa0.9□□□□□ -2.27
SMC1YFL008W BIR1P47134 954 aa0.9□□□□□ -2.27
SMC1YFL008W MIG2P53035 382 aa0.9□□□□□ -2.27
SMC1YFL008W NSA1P53136 463 aaPredicted RBP0.9□□□□□ -2.27
SMC1YFL008W CUE3P53137 624 aaKnown RBP0.9□□□□□ -2.27
SMC1YFL008W YNR068CP53754 272 aa0.9□□□□□ -2.27
SMC1YFL008W NHP10Q03435 203 aa0.9□□□□□ -2.27
SMC1YFL008W YMR209CQ03648 457 aa0.9□□□□□ -2.27
SMC1YFL008W PEX12Q04370 399 aa0.9□□□□□ -2.27
SMC1YFL008W LDS2Q08218 356 aa0.9□□□□□ -2.27
SMC1YFL008W CLP1Q08685 445 aaPredicted RBP0.9□□□□□ -2.27
SMC1YFL008W RPN8Q08723 338 aaKnown RBP0.9□□□□□ -2.27
SMC1YFL008W NSL1Q12143 216 aa0.9□□□□□ -2.27
SMC1YFL008W YOR338WQ99326 363 aa0.9□□□□□ -2.27
SMC1YFL008W KIN28P06242 306 aa0.9□□□□□ -2.27
SMC1YFL008W OM45P16547 393 aa0.9□□□□□ -2.27
SMC1YFL008W PHO13P19881 312 aa0.9□□□□□ -2.27
SMC1YFL008W CMK2P22517 447 aa0.9□□□□□ -2.27
SMC1YFL008W RNA15P25299 296 aaPredicted RBP0.9□□□□□ -2.27
SMC1YFL008W TPS2P31688 896 aaKnown RBP0.9□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 72.1 ms