RNA–Protein interactions for RNA: YDR354W

TRP4, Transcript of Anthranilate phosphoribosyl transferase, yeastyeast

Gene TRP4, Length 1,143 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP4YDR354W PRM9P39551 298 aa3.5□□□□□ -1.85
TRP4YDR354W HAM1P47119 197 aaKnown RBP3.5□□□□□ -1.85
TRP4YDR354W ASN2P49090 572 aaKnown RBP3.5□□□□□ -1.85
TRP4YDR354W LIF1P53150 421 aa3.5□□□□□ -1.85
TRP4YDR354W YNL146WP53906 100 aa3.5□□□□□ -1.85
TRP4YDR354W MRPS16Q02608 121 aa3.5□□□□□ -1.85
TRP4YDR354W RNY1Q02933 434 aaKnown RBP3.5□□□□□ -1.85
TRP4YDR354W ECM11Q04110 302 aa3.5□□□□□ -1.85
TRP4YDR354W CSM3Q04659 317 aa3.5□□□□□ -1.85
TRP4YDR354W SPC2Q04969 178 aa3.5□□□□□ -1.85
TRP4YDR354W RRG8Q06109 277 aa3.5□□□□□ -1.85
TRP4YDR354W FMP16Q12497 93 aa3.5□□□□□ -1.85
TRP4YDR354W SRN2Q99176 213 aa3.5□□□□□ -1.85
TRP4YDR354W PIS1P06197 220 aaKnown RBP3.49□□□□□ -1.85
TRP4YDR354W CDC21P06785 304 aa3.49□□□□□ -1.85
TRP4YDR354W RPL27AP0C2H6 136 aaKnown RBP3.49□□□□□ -1.85
TRP4YDR354W RPL27BP0C2H7 136 aaKnown RBP3.49□□□□□ -1.85
TRP4YDR354W SSC1P0CS90 654 aaKnown RBP3.49□□□□□ -1.85
TRP4YDR354W UTR1P21373 530 aa3.49□□□□□ -1.85
TRP4YDR354W DPB2P24482 689 aaPredicted RBP3.49□□□□□ -1.85
TRP4YDR354W PPA2P28239 310 aa3.49□□□□□ -1.85
TRP4YDR354W ZIP1P31111 875 aa3.49□□□□□ -1.85
TRP4YDR354W ZUO1P32527 433 aaKnown RBP3.49□□□□□ -1.85
TRP4YDR354W SKG6P32900 734 aaPredicted RBP3.49□□□□□ -1.85
TRP4YDR354W SKN1P33336 771 aa3.49□□□□□ -1.85
TRP4YDR354W YPT52P36018 234 aaKnown RBP3.49□□□□□ -1.85
TRP4YDR354W OM14P38325 134 aa3.49□□□□□ -1.85
TRP4YDR354W YMR262WP38430 313 aa3.49□□□□□ -1.85
TRP4YDR354W MMF1P40185 145 aaKnown RBP3.49□□□□□ -1.85
TRP4YDR354W RFC4P40339 323 aaKnown RBP3.49□□□□□ -1.85
TRP4YDR354W GVP36P40531 326 aaKnown RBP3.49□□□□□ -1.85
TRP4YDR354W GLG2P47011 380 aa3.49□□□□□ -1.85
TRP4YDR354W LOH1P47055 219 aa3.49□□□□□ -1.85
TRP4YDR354W RIB4P50861 169 aaPredicted RBP3.49□□□□□ -1.85
TRP4YDR354W PXR1P53335 271 aaPredicted RBP3.49□□□□□ -1.85
TRP4YDR354W DBP6P53734 629 aaKnown RBP3.49□□□□□ -1.85
TRP4YDR354W TIM8P57744 87 aa3.49□□□□□ -1.85
TRP4YDR354W FMN1Q03778 218 aa3.49□□□□□ -1.85
TRP4YDR354W SHS1Q07657 551 aa3.49□□□□□ -1.85
TRP4YDR354W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
TRP4YDR354W SFG1Q12507 346 aa3.49□□□□□ -1.85
TRP4YDR354W NAG1Q8TGN9 163 aa3.49□□□□□ -1.85
TRP4YDR354W STT4P37297 1900 aa3.48□□□□□ -1.85
TRP4YDR354W COX4P04037 155 aa3.48□□□□□ -1.85
TRP4YDR354W ATP1P07251 545 aaKnown RBP3.48□□□□□ -1.85
TRP4YDR354W PET494P07390 489 aaPredicted RBP3.48□□□□□ -1.85
TRP4YDR354W MSF1P08425 469 aa3.48□□□□□ -1.85
TRP4YDR354W SNA3P14359 133 aa3.48□□□□□ -1.85
TRP4YDR354W SEN2P16658 377 aa3.48□□□□□ -1.85
TRP4YDR354W CMK2P22517 447 aa3.48□□□□□ -1.85
TRP4YDR354W YSR3P23501 404 aa3.48□□□□□ -1.85
TRP4YDR354W RRT12P25381 491 aa3.48□□□□□ -1.85
TRP4YDR354W CDC50P25656 391 aa3.48□□□□□ -1.85
TRP4YDR354W ATP7P30902 174 aa3.48□□□□□ -1.85
TRP4YDR354W YSC83P32792 385 aa3.48□□□□□ -1.85
TRP4YDR354W AIM29P36154 155 aa3.48□□□□□ -1.85
TRP4YDR354W RTC3P38804 111 aaPredicted RBP3.48□□□□□ -1.85
TRP4YDR354W SEO1P39709 593 aa3.48□□□□□ -1.85
TRP4YDR354W SEC72P39742 193 aaKnown RBP3.48□□□□□ -1.85
TRP4YDR354W YMR134WP40207 237 aa3.48□□□□□ -1.85
TRP4YDR354W ATM1P40416 690 aa3.48□□□□□ -1.85
TRP4YDR354W HIT1P46973 164 aa3.48□□□□□ -1.85
TRP4YDR354W PGU1P47180 361 aa3.48□□□□□ -1.85
TRP4YDR354W USE1P53146 245 aa3.48□□□□□ -1.85
TRP4YDR354W SSU72P53538 206 aaPredicted RBP3.48□□□□□ -1.85
TRP4YDR354W MRPL50P53724 139 aa3.48□□□□□ -1.85
TRP4YDR354W YNL260CP53846 198 aa3.48□□□□□ -1.85
TRP4YDR354W YDR541CQ03049 344 aa3.48□□□□□ -1.85
TRP4YDR354W VHS1Q03785 461 aa3.48□□□□□ -1.85
TRP4YDR354W YMR310CQ04867 317 aaPredicted RBP3.48□□□□□ -1.85
TRP4YDR354W NDL1Q06568 189 aa3.48□□□□□ -1.85
TRP4YDR354W DNL4Q08387 944 aaPredicted RBP3.48□□□□□ -1.85
TRP4YDR354W SRO7Q12038 1033 aa3.48□□□□□ -1.85
TRP4YDR354W YCR024C-BQ3E7Z8 88 aa3.48□□□□□ -1.85
TRP4YDR354W SLH1P53327 1967 aaKnown RBP3.47□□□□□ -1.85
TRP4YDR354W CMD1P06787 147 aaKnown RBP3.47□□□□□ -1.85
TRP4YDR354W CDC33P07260 213 aaKnown RBP3.47□□□□□ -1.85
TRP4YDR354W RPL24BP24000 155 aaKnown RBP3.47□□□□□ -1.85
TRP4YDR354W PBN1P25580 416 aa3.47□□□□□ -1.85
TRP4YDR354W CWP1P28319 239 aa3.47□□□□□ -1.85
TRP4YDR354W YEF1P32622 495 aa3.47□□□□□ -1.85
TRP4YDR354W RAD23P32628 398 aaKnown RBP3.47□□□□□ -1.85
TRP4YDR354W AST1P35183 429 aa3.47□□□□□ -1.85
TRP4YDR354W BIO3P50277 480 aa3.47□□□□□ -1.85
TRP4YDR354W LSG1P53145 640 aaKnown RBP3.47□□□□□ -1.85
TRP4YDR354W CUS2P53830 285 aaPredicted RBP3.47□□□□□ -1.85
TRP4YDR354W SPR6Q01684 191 aa3.47□□□□□ -1.85
TRP4YDR354W ARO80Q04052 950 aa3.47□□□□□ -1.85
TRP4YDR354W YLR283WQ05867 314 aa3.47□□□□□ -1.85
TRP4YDR354W CTS2Q06350 511 aa3.47□□□□□ -1.85
TRP4YDR354W YRA1Q12159 226 aaKnown RBP3.47□□□□□ -1.85
TRP4YDR354W RUP1Q12242 671 aa3.47□□□□□ -1.85
TRP4YDR354W NOT5Q12514 560 aaPredicted RBP3.47□□□□□ -1.85
TRP4YDR354W TDH2P00358 332 aaKnown RBP3.46□□□□□ -1.86
TRP4YDR354W TDH3P00359 332 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
TRP4YDR354W RAD7P06779 565 aa3.46□□□□□ -1.86
TRP4YDR354W TCP1P12612 559 aaKnown RBP3.46□□□□□ -1.86
TRP4YDR354W ZRC1P20107 442 aa3.46□□□□□ -1.86
TRP4YDR354W POP4P38336 279 aa3.46□□□□□ -1.86
TRP4YDR354W INM1P38710 295 aa3.46□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms