RNA–Protein interactions for RNA: YDR013W

PSF1, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeast

Gene PSF1, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PSF1	YDR013W	MTM1	P53320	366 aa		3.04	□□□□□ -1.92
PSF1	YDR013W	RNH70	P53331	553 aa		3.04	□□□□□ -1.92
PSF1	YDR013W	ERV25	P54837	211 aa	Known RBP	3.04	□□□□□ -1.92
PSF1	YDR013W	RHO3	Q00245	231 aa	Known RBP	3.04	□□□□□ -1.92
PSF1	YDR013W	CTL1	Q03220	320 aa	Known RBP	3.04	□□□□□ -1.92
PSF1	YDR013W	DIG2	Q03373	323 aa	Known RBP	3.04	□□□□□ -1.92
PSF1	YDR013W	YMR252C	Q04814	134 aa		3.04	□□□□□ -1.92
PSF1	YDR013W	NNT1	Q05874	261 aa		3.04	□□□□□ -1.92
PSF1	YDR013W	PEX30	Q06169	523 aa		3.04	□□□□□ -1.92
PSF1	YDR013W	TPO3	Q06451	622 aa		3.04	□□□□□ -1.92
PSF1	YDR013W	YOL073C	Q08232	322 aa		3.04	□□□□□ -1.92
PSF1	YDR013W	IRC13	Q08630	104 aa		3.04	□□□□□ -1.92
PSF1	YDR013W	DET1	Q99288	334 aa	Known RBP	3.04	□□□□□ -1.92
PSF1	YDR013W	GAL7	P08431	366 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	DPM1	P14020	267 aa	Known RBP	3.03	□□□□□ -1.92
PSF1	YDR013W	HAP4	P14064	554 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	AAC3	P18238	307 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	PRP2	P20095	876 aa	Predicted RBP	3.03	□□□□□ -1.92
PSF1	YDR013W	OLE1	P21147	510 aa	Known RBP	3.03	□□□□□ -1.92
PSF1	YDR013W	HXT2	P23585	541 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	PPH21	P23594	369 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	GPI12	P23797	304 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	CNE1	P27825	502 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	FUN19	P28003	413 aa	Predicted RBP	3.03	□□□□□ -1.92
PSF1	YDR013W	CWP1	P28319	239 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	THI4	P32318	326 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	SRB6	P32570	121 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	RML2	P32611	393 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	CDC13	P32797	924 aa	Known RBP	3.03	□□□□□ -1.92
PSF1	YDR013W	TIM12	P32830	109 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	ECM15	P35195	104 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	SRP102	P36057	244 aa	Predicted RBP	3.03	□□□□□ -1.92
PSF1	YDR013W	SRX1	P36077	127 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	YKL071W	P36086	256 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	FMP46	P36141	133 aa	Known RBP	3.03	□□□□□ -1.92
PSF1	YDR013W	MAL32	P38158	584 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	CCZ1	P38273	704 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	APD1	P38281	316 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	3.03	□□□□□ -1.92	not detected
PSF1	YDR013W	ARO9	P38840	513 aa	Predicted RBP	3.03	□□□□□ -1.92
PSF1	YDR013W	MSS4	P38994	779 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	SSO2	P39926	295 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	VRG4	P40107	337 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	LRO1	P40345	661 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	SHR5	P41912	237 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	CIN2	P46670	268 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	NIT2	P47016	307 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	ALB1	P47019	175 aa	Predicted RBP	3.03	□□□□□ -1.92
PSF1	YDR013W	MOG1	P47123	218 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	PKP2	P53170	491 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	MAL12	P53341	584 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	HOL1	P53389	586 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	ALG9	P53868	555 aa	Known RBP	3.03	□□□□□ -1.92
PSF1	YDR013W	NRK1	P53915	240 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	YLR460C	P54007	376 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	REC102	Q02721	264 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	SSY1	Q03770	852 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	CAB5	Q03941	241 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	COX20	Q04935	205 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	RSF1	Q05043	376 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	BNA5	Q05979	453 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	TAZ1	Q06510	381 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	NOC4	Q06512	552 aa	Predicted RBP	3.03	□□□□□ -1.92
PSF1	YDR013W	BER1	Q06688	274 aa	Known RBP	3.03	□□□□□ -1.92
PSF1	YDR013W	ENB1	Q08299	606 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	YOR365C	Q08844	703 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	SRL2	Q12020	392 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	YDL211C	Q12121	372 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	YOL107W	Q12239	342 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	PRP46	Q12417	451 aa	Predicted RBP	3.03	□□□□□ -1.92
PSF1	YDR013W	FRE6	Q12473	712 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	YGL194C-A	Q2V2P6	80 aa		3.03	□□□□□ -1.92
PSF1	YDR013W	QCR7	P00128	127 aa		3.02	□□□□□ -1.93
PSF1	YDR013W	ARG80	P07249	177 aa		3.02	□□□□□ -1.93
PSF1	YDR013W	NAM2	P11325	894 aa		3.02	□□□□□ -1.93
PSF1	YDR013W	STE18	P18852	110 aa		3.02	□□□□□ -1.93
PSF1	YDR013W	YPK2	P18961	677 aa		3.02	□□□□□ -1.93
PSF1	YDR013W	RPA135	P22138	1203 aa	Known RBP	3.02	□□□□□ -1.93
PSF1	YDR013W	STE50	P25344	346 aa		3.02	□□□□□ -1.93
PSF1	YDR013W	YCP4	P25349	247 aa	Known RBP	3.02	□□□□□ -1.93
PSF1	YDR013W	YCR100C	P25606	316 aa		3.02	□□□□□ -1.93
PSF1	YDR013W	DBF20	P32328	564 aa		3.02	□□□□□ -1.93
PSF1	YDR013W	MRP20	P32387	263 aa		3.02	□□□□□ -1.93
PSF1	YDR013W	MRPL37	P36532	105 aa		3.02	□□□□□ -1.93
PSF1	YDR013W	ALG3	P38179	458 aa		3.02	□□□□□ -1.93
PSF1	YDR013W	MTC4	P38335	694 aa	Known RBP	3.02	□□□□□ -1.93
PSF1	YDR013W	SSH1	P38353	490 aa	Known RBP	3.02	□□□□□ -1.93
PSF1	YDR013W	LAG1	P38703	411 aa		3.02	□□□□□ -1.93
PSF1	YDR013W	YER184C	P39961	794 aa		3.02	□□□□□ -1.93
PSF1	YDR013W	SMB1	P40018	196 aa	Known RBP	3.02	□□□□□ -1.93
PSF1	YDR013W	PUG1	P40100	303 aa		3.02	□□□□□ -1.93
PSF1	YDR013W	LTP1	P40347	161 aa		3.02	□□□□□ -1.93
PSF1	YDR013W	QRI7	P43122	407 aa		3.02	□□□□□ -1.93
PSF1	YDR013W	SRB7	P47822	140 aa		3.02	□□□□□ -1.93
PSF1	YDR013W	HSV2	P50079	448 aa	Predicted RBP	3.02	□□□□□ -1.93
PSF1	YDR013W	RMD9	P53140	646 aa	Known RBP	3.02	□□□□□ -1.93
PSF1	YDR013W	YGR012W	P53206	393 aa		3.02	□□□□□ -1.93
PSF1	YDR013W	FMP48	P53233	369 aa		3.02	□□□□□ -1.93
PSF1	YDR013W	GTF1	P53260	183 aa	Predicted RBP	3.02	□□□□□ -1.93
PSF1	YDR013W	SLI1	P53304	468 aa		3.02	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 71.4 ms