RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeastyeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTG3YBL103C UTP25P40498 721 aaKnown RBP2.41□□□□□ -2.02
RTG3YBL103C LOH1P47055 219 aa2.41□□□□□ -2.02
RTG3YBL103C YLR173WQ06247 608 aa2.41□□□□□ -2.02
RTG3YBL103C YPL245WQ12179 454 aaKnown RBP2.41□□□□□ -2.02
RTG3YBL103C RPL24AP04449 155 aaKnown RBP2.4□□□□□ -2.02
RTG3YBL103C RAD7P06779 565 aa2.4□□□□□ -2.02
RTG3YBL103C PRE7P23724 241 aaKnown RBP2.4□□□□□ -2.02
RTG3YBL103C GPI12P23797 304 aa2.4□□□□□ -2.02
RTG3YBL103C RBK1P25332 333 aa2.4□□□□□ -2.02
RTG3YBL103C RSA4P25382 515 aaKnown RBP2.4□□□□□ -2.02
RTG3YBL103C VMA5P31412 392 aaKnown RBP2.4□□□□□ -2.02
RTG3YBL103C YBL081WP38180 368 aaKnown RBP2.4□□□□□ -2.02
RTG3YBL103C ATG12P38316 186 aa2.4□□□□□ -2.02
RTG3YBL103C RCY1P39531 840 aa2.4□□□□□ -2.02
RTG3YBL103C YNL260CP53846 198 aa2.4□□□□□ -2.02
RTG3YBL103C YNL134CP53912 376 aaKnown RBP2.4□□□□□ -2.02
RTG3YBL103C FEX1Q08913 375 aa2.4□□□□□ -2.02
RTG3YBL103C FEX2Q08991 375 aa2.4□□□□□ -2.02
RTG3YBL103C SAC3P46674 1301 aa2.4□□□□□ -2.03
RTG3YBL103C PET100P38958 111 aa2.39□□□□□ -2.03
RTG3YBL103C CDC40P40968 455 aaPredicted RBP2.39□□□□□ -2.03
RTG3YBL103C TAF6P53040 516 aa2.39□□□□□ -2.03
RTG3YBL103C RVB1Q03940 463 aaKnown RBP2.39□□□□□ -2.03
RTG3YBL103C BCP1Q06338 283 aa2.39□□□□□ -2.03
RTG3YBL103C BTS1Q12051 335 aa2.39□□□□□ -2.03
RTG3YBL103C MED4Q12343 284 aa2.39□□□□□ -2.03
RTG3YBL103C MSS116P15424 664 aaKnown RBP2.39□□□□□ -2.03
RTG3YBL103C RPL5P26321 297 aaKnown RBP2.39□□□□□ -2.03
RTG3YBL103C MSN4P33749 630 aa2.39□□□□□ -2.03
RTG3YBL103C YKL162CP36052 402 aa2.39□□□□□ -2.03
RTG3YBL103C TCD1P38756 429 aa2.39□□□□□ -2.03
RTG3YBL103C YHR045WP38775 560 aa2.39□□□□□ -2.03
RTG3YBL103C BNA6P43619 295 aa2.39□□□□□ -2.03
RTG3YBL103C YJL118WP47022 219 aa2.39□□□□□ -2.03
RTG3YBL103C UFD1P53044 361 aa2.39□□□□□ -2.03
RTG3YBL103C PET117Q02771 107 aa2.39□□□□□ -2.03
RTG3YBL103C GPN3Q06543 272 aa2.39□□□□□ -2.03
RTG3YBL103C SAM4Q08985 325 aaKnown RBP2.39□□□□□ -2.03
RTG3YBL103C CHD1P32657 1468 aa2.38□□□□□ -2.03
RTG3YBL103C CFT1Q06632 1357 aaKnown RBP2.38□□□□□ -2.03
RTG3YBL103C DOA4P32571 926 aa2.38□□□□□ -2.03
RTG3YBL103C IMP3P32899 183 aaPredicted RBP2.38□□□□□ -2.03
RTG3YBL103C YKT6P36015 200 aaKnown RBP2.38□□□□□ -2.03
RTG3YBL103C YGP1P38616 354 aaKnown RBP2.38□□□□□ -2.03
RTG3YBL103C YER188WP40103 239 aa2.38□□□□□ -2.03
RTG3YBL103C FMP33P46998 180 aa2.38□□□□□ -2.03
RTG3YBL103C SPP2Q02521 185 aa2.38□□□□□ -2.03
RTG3YBL103C BOP2Q06150 570 aa2.38□□□□□ -2.03
RTG3YBL103C PEX30Q06169 523 aa2.38□□□□□ -2.03
RTG3YBL103C YLR012CQ07927 99 aa2.38□□□□□ -2.03
RTG3YBL103C YOR292CQ08743 309 aa2.38□□□□□ -2.03
RTG3YBL103C SSK22P25390 1331 aaPredicted RBP2.37□□□□□ -2.03
RTG3YBL103C ERD1P16151 362 aa2.37□□□□□ -2.03
RTG3YBL103C RPB4P20433 221 aaPredicted RBP2.37□□□□□ -2.03
RTG3YBL103C SUA5P32579 426 aa2.37□□□□□ -2.03
RTG3YBL103C HIS2P38635 335 aa2.37□□□□□ -2.03
RTG3YBL103C KEL2P50090 882 aa2.37□□□□□ -2.03
RTG3YBL103C TIM21P53220 239 aa2.37□□□□□ -2.03
RTG3YBL103C PBP4Q07362 185 aaKnown RBP2.37□□□□□ -2.03
RTG3YBL103C SIA1Q12212 622 aa2.37□□□□□ -2.03
RTG3YBL103C YSR3P23501 404 aa2.36□□□□□ -2.03
RTG3YBL103C VPS3P23643 1011 aa2.36□□□□□ -2.03
RTG3YBL103C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
RTG3YBL103C RTR1P40084 226 aaPredicted RBP2.36□□□□□ -2.03
RTG3YBL103C MRX5P47007 382 aa2.36□□□□□ -2.03
RTG3YBL103C COX20Q04935 205 aa2.36□□□□□ -2.03
RTG3YBL103C CTS2Q06350 511 aa2.36□□□□□ -2.03
RTG3YBL103C GIS3Q12418 502 aa2.36□□□□□ -2.03
RTG3YBL103C ARG80P07249 177 aa2.35□□□□□ -2.03
RTG3YBL103C MSF1P08425 469 aa2.35□□□□□ -2.03
RTG3YBL103C YOL163WP0CF20 169 aa2.35□□□□□ -2.03
RTG3YBL103C YAK1P14680 807 aa2.35□□□□□ -2.03
RTG3YBL103C POL30P15873 258 aaKnown RBP2.35□□□□□ -2.03
RTG3YBL103C BMH2P34730 273 aaKnown RBP2.35□□□□□ -2.03
RTG3YBL103C INA22P40576 216 aa2.35□□□□□ -2.03
RTG3YBL103C GCN20P43535 752 aaKnown RBP2.35□□□□□ -2.03
RTG3YBL103C COX16P47081 118 aa2.35□□□□□ -2.03
RTG3YBL103C UBX2Q04228 584 aa2.35□□□□□ -2.03
RTG3YBL103C SEC13Q04491 297 aaKnown RBP2.35□□□□□ -2.03
RTG3YBL103C YPR172WQ06608 200 aa2.35□□□□□ -2.03
RTG3YBL103C RAD3P06839 778 aa2.34□□□□□ -2.03
RTG3YBL103C FRS2P15625 503 aaKnown RBP2.34□□□□□ -2.03
RTG3YBL103C VPS1P21576 704 aaKnown RBP2.34□□□□□ -2.03
RTG3YBL103C YCR016WP25617 290 aaKnown RBP2.34□□□□□ -2.03
RTG3YBL103C CWP1P28319 239 aa2.34□□□□□ -2.03
RTG3YBL103C ZRT1P32804 376 aa2.34□□□□□ -2.03
RTG3YBL103C SWD2P36104 329 aaPredicted RBP2.34□□□□□ -2.03
RTG3YBL103C YER085CP40058 173 aa2.34□□□□□ -2.03
RTG3YBL103C SHQ1P40486 507 aaPredicted RBP2.34□□□□□ -2.03
RTG3YBL103C OKP1P53298 406 aa2.34□□□□□ -2.03
RTG3YBL103C BIO4P53630 237 aa2.34□□□□□ -2.03
RTG3YBL103C SRL4Q03085 281 aa2.34□□□□□ -2.03
RTG3YBL103C VIK1Q12045 647 aa2.34□□□□□ -2.03
RTG3YBL103C ADF1Q2V2Q1 113 aa2.34□□□□□ -2.03
RTG3YBL103C MER1P16523 270 aa2.33□□□□□ -2.04
RTG3YBL103C ACB1P31787 87 aa2.33□□□□□ -2.04
RTG3YBL103C SRB4P32569 687 aa2.33□□□□□ -2.04
RTG3YBL103C GPX1P36014 167 aa2.33□□□□□ -2.04
RTG3YBL103C AIM29P36154 155 aa2.33□□□□□ -2.04
RTG3YBL103C TDA11P38854 504 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms