RNA–Protein interactions for RNA: snR4

snR4, Transcript of C/D box small nucleolar RNA (snoRNA) but not shown to be active, yeast

Gene snR4, Length 186 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR4	snR4	SPC19	Q03954	165 aa		7.36	□□□□□ -1.23
snR4	snR4	YMR315W	Q04869	349 aa	Known RBP	7.36	□□□□□ -1.23
snR4	snR4	CIA1	Q05583	330 aa		7.36	□□□□□ -1.23
snR4	snR4	YPR114W	Q06107	315 aa		7.36	□□□□□ -1.23
snR4	snR4	THI73	Q07904	523 aa		7.36	□□□□□ -1.23
snR4	snR4	SPC3	Q12133	184 aa		7.36	□□□□□ -1.23
snR4	snR4	AHC1	Q12433	566 aa		7.36	□□□□□ -1.23
snR4	snR4	YOR338W	Q99326	363 aa		7.36	□□□□□ -1.23
snR4	snR4	RPS31	P05759	152 aa	Known RBP	7.35	□□□□□ -1.23
snR4	snR4	YOL162W	P0CF19	215 aa		7.35	□□□□□ -1.23
snR4	snR4	UBI4	P0CG63	381 aa	Known RBP	7.35	□□□□□ -1.23
snR4	snR4	RPL40A	P0CH08	128 aa	Known RBP	7.35	□□□□□ -1.23
snR4	snR4	RPL40B	P0CH09	128 aa	Known RBP	7.35	□□□□□ -1.23
snR4	snR4	APA1	P16550	321 aa	Known RBP	7.35	□□□□□ -1.23
snR4	snR4	YPK2	P18961	677 aa		7.35	□□□□□ -1.23
snR4	snR4	EPT1	P22140	391 aa		7.35	□□□□□ -1.23
snR4	snR4	SPS19	P32573	292 aa	Known RBP	7.35	□□□□□ -1.23
snR4	snR4	SSS1	P35179	80 aa		7.35	□□□□□ -1.23
snR4	snR4	DOA1	P36037	715 aa		7.35	□□□□□ -1.23
snR4	snR4	TCD2	P36101	447 aa	Known RBP	7.35	□□□□□ -1.23
snR4	snR4	SDH4	P37298	181 aa		7.35	□□□□□ -1.23
snR4	snR4	BNA4	P38169	460 aa		7.35	□□□□□ -1.23
snR4	snR4	YPC1	P38298	316 aa		7.35	□□□□□ -1.23
snR4	snR4	BSD2	P38356	321 aa		7.35	□□□□□ -1.23
snR4	snR4	INM1	P38710	295 aa		7.35	□□□□□ -1.23
snR4	snR4	LYS12	P40495	371 aa	Known RBP	7.35	□□□□□ -1.23
snR4	snR4	UBX6	P47049	396 aa		7.35	□□□□□ -1.23
snR4	snR4	DAN1	P47178	298 aa		7.35	□□□□□ -1.23
snR4	snR4	PUS4	P48567	403 aa	Known RBP	7.35	□□□□□ -1.23
snR4	snR4	VHT1	P53241	593 aa		7.35	□□□□□ -1.23
snR4	snR4	GPI15	P53961	229 aa		7.35	□□□□□ -1.23
snR4	snR4	ARG5,6	Q01217	863 aa		7.35	□□□□□ -1.23
snR4	snR4	SMA2	Q04658	369 aa		7.35	□□□□□ -1.23
snR4	snR4	RSF1	Q05043	376 aa		7.35	□□□□□ -1.23
snR4	snR4	YLR225C	Q05948	407 aa	Known RBP	7.35	□□□□□ -1.23
snR4	snR4	CYK3	Q07533	885 aa		7.35	□□□□□ -1.23
snR4	snR4	PML1	Q07930	204 aa	Predicted RBP	7.35	□□□□□ -1.23
snR4	snR4	TFC7	Q12415	435 aa		7.35	□□□□□ -1.23
snR4	snR4	SOD2	P00447	233 aa		7.34	□□□□□ -1.23
snR4	snR4	RPL25	P04456	142 aa	Known RBP	7.34	□□□□□ -1.23
snR4	snR4	ADK1	P07170	222 aa	Known RBP	7.34	□□□□□ -1.23
snR4	snR4	GEX1	P25596	615 aa		7.34	□□□□□ -1.23
snR4	snR4	RSC6	P25632	483 aa		7.34	□□□□□ -1.23
snR4	snR4	MSK1	P32048	576 aa		7.34	□□□□□ -1.23
snR4	snR4	ERG24	P32462	438 aa	Known RBP	7.34	□□□□□ -1.23
snR4	snR4	TSA1	P34760	196 aa	Known RBP	7.34	□□□□□ -1.23
snR4	snR4	GEX2	P36173	615 aa		7.34	□□□□□ -1.23
snR4	snR4	PCL5	P38794	229 aa		7.34	□□□□□ -1.23
snR4	snR4	YHR127W	P38833	243 aa	Known RBP	7.34	□□□□□ -1.23
snR4	snR4	YHC3	P47040	408 aa		7.34	□□□□□ -1.23
snR4	snR4	YJR141W	P47172	347 aa	Predicted RBP	7.34	□□□□□ -1.23
snR4	snR4	SOL1	P50278	321 aa		7.34	□□□□□ -1.23
snR4	snR4	MNT2	P53059	558 aa		7.34	□□□□□ -1.23
snR4	snR4	YGL117W	P53133	265 aa		7.34	□□□□□ -1.23
snR4	snR4	YGL101W	P53144	215 aa		7.34	□□□□□ -1.23
snR4	snR4	PKP2	P53170	491 aa		7.34	□□□□□ -1.23
snR4	snR4	COQ6	P53318	479 aa		7.34	□□□□□ -1.23
snR4	snR4	CSL4	P53859	292 aa	Predicted RBP	7.34	□□□□□ -1.23
snR4	snR4	PIR1	Q03178	341 aa		7.34	□□□□□ -1.23
snR4	snR4	YLR257W	Q06146	321 aa	Known RBP	7.34	□□□□□ -1.23
snR4	snR4	RPB3	P16370	318 aa	Known RBP	7.33	□□□□□ -1.24
snR4	snR4	MRPL44	P19956	98 aa		7.33	□□□□□ -1.24
snR4	snR4	SEC59	P20048	519 aa		7.33	□□□□□ -1.24
snR4	snR4	PUT3	P25502	979 aa	Predicted RBP	7.33	□□□□□ -1.24
snR4	snR4	CDC50	P25656	391 aa		7.33	□□□□□ -1.24
snR4	snR4	SGE1	P33335	543 aa		7.33	□□□□□ -1.24
snR4	snR4	SRP102	P36057	244 aa	Predicted RBP	7.33	□□□□□ -1.24
snR4	snR4	DMA1	P38823	416 aa		7.33	□□□□□ -1.24
snR4	snR4	AXL2	P38928	823 aa		7.33	□□□□□ -1.24
snR4	snR4	GGC1	P38988	300 aa		7.33	□□□□□ -1.24
snR4	snR4	SDP1	P40479	209 aa		7.33	□□□□□ -1.24
snR4	snR4	ICE2	P40499	491 aa		7.33	□□□□□ -1.24
snR4	snR4	VMA21	P41806	77 aa		7.33	□□□□□ -1.24
snR4	snR4	AGX1	P43567	385 aa		7.33	□□□□□ -1.24
snR4	snR4	ALK1	P43633	760 aa	Known RBP	7.33	□□□□□ -1.24
snR4	snR4	MNN10	P50108	393 aa	Known RBP	7.33	□□□□□ -1.24
snR4	snR4	COG7	P53195	279 aa		7.33	□□□□□ -1.24
snR4	snR4	TIM21	P53220	239 aa		7.33	□□□□□ -1.24
snR4	snR4	CCE1	Q03702	353 aa		7.33	□□□□□ -1.24
snR4	snR4	YDR387C	Q04162	555 aa		7.33	□□□□□ -1.24
snR4	snR4	FIT1	Q04433	528 aa		7.33	□□□□□ -1.24
snR4	snR4	HOF1	Q05080	669 aa		7.33	□□□□□ -1.24
snR4	snR4	LUC7	Q07508	261 aa	Predicted RBP	7.33	□□□□□ -1.24
snR4	snR4	CRT10	Q08226	957 aa		7.33	□□□□□ -1.24
snR4	snR4	YOR352W	Q08816	343 aa		7.33	□□□□□ -1.24
snR4	snR4	MMT2	Q08970	484 aa		7.33	□□□□□ -1.24
snR4	snR4	YDL007C-A	Q2V2Q0	85 aa		7.33	□□□□□ -1.24
snR4	snR4	YJR112W-A	Q3E743	109 aa		7.33	□□□□□ -1.24
snR4	snR4	PNO1	Q99216	274 aa	Known RBP	7.33	□□□□□ -1.24
snR4	snR4	KIN28	P06242	306 aa		7.32	□□□□□ -1.24
snR4	snR4	YML003W	P0CF16	290 aa		7.32	□□□□□ -1.24
snR4	snR4	GPI12	P23797	304 aa		7.32	□□□□□ -1.24
snR4	snR4	POF1	P25576	258 aa		7.32	□□□□□ -1.24
snR4	snR4	CNE1	P27825	502 aa		7.32	□□□□□ -1.24
snR4	snR4	PXA2	P34230	853 aa		7.32	□□□□□ -1.24
snR4	snR4	ASH1	P34233	588 aa		7.32	□□□□□ -1.24
snR4	snR4	BET3	P36149	193 aa		7.32	□□□□□ -1.24
snR4	snR4	SMB1	P40018	196 aa	Known RBP	7.32	□□□□□ -1.24
snR4	snR4	EMC5	P40540	141 aa		7.32	□□□□□ -1.24
snR4	snR4	RTS2	P40962	232 aa		7.32	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 133.1 ms