RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W ARP10Q04549 284 aa3.5□□□□□ -1.85
USA1YML029W VBA4Q04602 768 aaKnown RBP3.5□□□□□ -1.85
USA1YML029W LUC7Q07508 261 aaPredicted RBP3.5□□□□□ -1.85
USA1YML029W IPP1P00817 287 aaKnown RBP3.49□□□□□ -1.85
USA1YML029W CDC31P06704 161 aaKnown RBP3.49□□□□□ -1.85
USA1YML029W YFR010W-AP0C5N0 62 aa3.49□□□□□ -1.85
USA1YML029W IDP1P21954 428 aaKnown RBP3.49□□□□□ -1.85
USA1YML029W STE50P25344 346 aa3.49□□□□□ -1.85
USA1YML029W YEF1P32622 495 aa3.49□□□□□ -1.85
USA1YML029W YMR262WP38430 313 aa3.49□□□□□ -1.85
USA1YML029W RPS20P38701 121 aaKnown RBP3.49□□□□□ -1.85
USA1YML029W GPI16P38875 610 aa3.49□□□□□ -1.85
USA1YML029W SKN7P38889 622 aa3.49□□□□□ -1.85
USA1YML029W SIT1P39980 628 aa3.49□□□□□ -1.85
USA1YML029W XBP1P40489 647 aa3.49□□□□□ -1.85
USA1YML029W RBL2P48606 106 aaKnown RBP3.49□□□□□ -1.85
USA1YML029W SOK2P53438 785 aaPredicted RBP3.49□□□□□ -1.85
USA1YML029W EKI1Q03764 534 aa3.49□□□□□ -1.85
USA1YML029W SEI1Q06058 285 aa3.49□□□□□ -1.85
USA1YML029W SPC3Q12133 184 aa3.49□□□□□ -1.85
USA1YML029W YGK3Q12222 375 aaPredicted RBP3.49□□□□□ -1.85
USA1YML029W YIL002W-AQ3E7Z5 69 aa3.49□□□□□ -1.85
USA1YML029W FLO9P39712 1322 aa3.49□□□□□ -1.85
USA1YML029W IRA2P19158 3079 aa3.49□□□□□ -1.85
USA1YML029W HMG1P12683 1054 aa3.49□□□□□ -1.85
USA1YML029W ENA1P13587 1091 aa3.49□□□□□ -1.85
USA1YML029W SPO7P18410 259 aa3.49□□□□□ -1.85
USA1YML029W ERD2P18414 219 aa3.49□□□□□ -1.85
USA1YML029W YKL077WP36081 392 aa3.49□□□□□ -1.85
USA1YML029W OM14P38325 134 aa3.49□□□□□ -1.85
USA1YML029W MTC4P38335 694 aaKnown RBP3.49□□□□□ -1.85
USA1YML029W DDI1P40087 428 aa3.49□□□□□ -1.85
USA1YML029W SLS1P42900 643 aa3.49□□□□□ -1.85
USA1YML029W QRI7P43122 407 aa3.49□□□□□ -1.85
USA1YML029W ASI1P54074 624 aa3.49□□□□□ -1.85
USA1YML029W ENA2Q01896 1091 aa3.49□□□□□ -1.85
USA1YML029W RSM28Q03430 361 aa3.49□□□□□ -1.85
USA1YML029W SNX41Q04053 625 aa3.49□□□□□ -1.85
USA1YML029W ELP6Q04868 273 aa3.49□□□□□ -1.85
USA1YML029W ATG33Q06485 197 aa3.49□□□□□ -1.85
USA1YML029W YLR040CQ07988 224 aa3.49□□□□□ -1.85
USA1YML029W HER1Q12276 1246 aa3.49□□□□□ -1.85
USA1YML029W COX17Q12287 69 aa3.49□□□□□ -1.85
USA1YML029W NPC2Q12408 173 aa3.49□□□□□ -1.85
USA1YML029W PNS1Q12412 539 aa3.49□□□□□ -1.85
USA1YML029W ENA5Q12691 1091 aa3.49□□□□□ -1.85
USA1YML029W QCR7P00128 127 aa3.48□□□□□ -1.85
USA1YML029W STE12P13574 688 aa3.48□□□□□ -1.85
USA1YML029W DBP2P24783 546 aaKnown RBP3.48□□□□□ -1.85
USA1YML029W NFS1P25374 497 aa3.48□□□□□ -1.85
USA1YML029W HSP30P25619 332 aa3.48□□□□□ -1.85
USA1YML029W HSP150P32478 413 aa3.48□□□□□ -1.85
USA1YML029W ECT1P33412 323 aa3.48□□□□□ -1.85
USA1YML029W CHL4P38907 458 aa3.48□□□□□ -1.85
USA1YML029W REE1P40893 198 aa3.48□□□□□ -1.85
USA1YML029W GZF3P42944 551 aaKnown RBP3.48□□□□□ -1.85
USA1YML029W CAF16P43569 289 aa3.48□□□□□ -1.85
USA1YML029W IRC5P43610 853 aa3.48□□□□□ -1.85
USA1YML029W YGR066CP53242 292 aa3.48□□□□□ -1.85
USA1YML029W OGG1P53397 376 aaPredicted RBP3.48□□□□□ -1.85
USA1YML029W MOT3P54785 490 aaKnown RBP3.48□□□□□ -1.85
USA1YML029W SDC1Q03323 175 aa3.48□□□□□ -1.85
USA1YML029W SCS7Q03529 384 aa3.48□□□□□ -1.85
USA1YML029W DML1Q03652 475 aa3.48□□□□□ -1.85
USA1YML029W GAS2Q06135 555 aa3.48□□□□□ -1.85
USA1YML029W YPR147CQ06522 304 aaKnown RBP3.48□□□□□ -1.85
USA1YML029W GSH2Q08220 491 aa3.48□□□□□ -1.85
USA1YML029W YPL272CQ08984 517 aa3.48□□□□□ -1.85
USA1YML029W PCL9Q12477 304 aa3.48□□□□□ -1.85
USA1YML029W Q0144Q9ZZW2 109 aa3.48□□□□□ -1.85
USA1YML029W TEL1P38110 2787 aa3.48□□□□□ -1.85
USA1YML029W ADE5,7P07244 802 aaKnown RBP3.48□□□□□ -1.85
USA1YML029W PRB1P09232 635 aa3.48□□□□□ -1.85
USA1YML029W YGL041W-AP0C5N3 154 aa3.48□□□□□ -1.85
USA1YML029W MDL1P33310 695 aa3.48□□□□□ -1.85
USA1YML029W RPP1P38786 293 aa3.48□□□□□ -1.85
USA1YML029W YHR180WP38868 163 aa3.48□□□□□ -1.85
USA1YML029W STB1P42845 420 aa3.48□□□□□ -1.85
USA1YML029W NQM1P53228 333 aaPredicted RBP3.48□□□□□ -1.85
USA1YML029W ATG4P53867 494 aa3.48□□□□□ -1.85
USA1YML029W NUP49Q02199 472 aa3.48□□□□□ -1.85
USA1YML029W FDC1Q03034 503 aa3.48□□□□□ -1.85
USA1YML029W SRL4Q03085 281 aa3.48□□□□□ -1.85
USA1YML029W SNZ1Q03148 297 aa3.48□□□□□ -1.85
USA1YML029W OST6Q03723 332 aa3.48□□□□□ -1.85
USA1YML029W YDL218WQ07629 317 aa3.48□□□□□ -1.85
USA1YML029W RDL2Q08742 149 aaKnown RBP3.48□□□□□ -1.85
USA1YML029W YDL177CQ12257 170 aa3.48□□□□□ -1.85
USA1YML029W YOR343CQ12484 108 aa3.48□□□□□ -1.85
USA1YML029W YDL007C-AQ2V2Q0 85 aa3.48□□□□□ -1.85
USA1YML029W DPB2P24482 689 aaPredicted RBP3.47□□□□□ -1.85
USA1YML029W MRPL39P36533 70 aa3.47□□□□□ -1.85
USA1YML029W RTC2P38279 296 aa3.47□□□□□ -1.85
USA1YML029W GRE3P38715 327 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
USA1YML029W MDM31P38880 579 aa3.47□□□□□ -1.85
USA1YML029W IRC7P43623 340 aa3.47□□□□□ -1.85
USA1YML029W SRB7P47822 140 aa3.47□□□□□ -1.85
USA1YML029W SHE4P51534 789 aa3.47□□□□□ -1.85
USA1YML029W PPT1P53043 513 aa3.47□□□□□ -1.85
USA1YML029W PCP1P53259 346 aa3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms