RNA–Protein interactions for RNA: YDR432W

NPL3, Transcript of RNA-binding protein, yeast

Gene NPL3, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NPL3	YDR432W	HSP33	Q08914	237 aa	Known RBP	11.08	□□□□□ -0.64
NPL3	YDR432W	HSP32	Q08992	237 aa		11.08	□□□□□ -0.64
NPL3	YDR432W	TPK3	P05986	398 aa		11.07	□□□□□ -0.64
NPL3	YDR432W	SNF6	P18888	332 aa		11.07	□□□□□ -0.64
NPL3	YDR432W	TIF3	P34167	436 aa	Known RBP	11.07	□□□□□ -0.64
NPL3	YDR432W	RTC2	P38279	296 aa		11.07	□□□□□ -0.64
NPL3	YDR432W	SLS1	P42900	643 aa		11.07	□□□□□ -0.64
NPL3	YDR432W	SWP82	P43554	623 aa		11.07	□□□□□ -0.64
NPL3	YDR432W	DPB11	P47027	764 aa	Predicted RBP	11.07	□□□□□ -0.64
NPL3	YDR432W	BRR6	P53062	197 aa		11.07	□□□□□ -0.64
NPL3	YDR432W	RSM24	Q03976	319 aa		11.07	□□□□□ -0.64
NPL3	YDR432W	HMS1	Q12398	434 aa		11.07	□□□□□ -0.64
NPL3	YDR432W	SAM35	P14693	329 aa		11.06	□□□□□ -0.64
NPL3	YDR432W	PRE2	P30656	287 aa	Known RBP	11.06	□□□□□ -0.64
NPL3	YDR432W	BCK2	P33306	851 aa		11.06	□□□□□ -0.64
NPL3	YDR432W	MNT4	P53745	580 aa		11.06	□□□□□ -0.64
NPL3	YDR432W	COG5	P53951	403 aa		11.06	□□□□□ -0.64
NPL3	YDR432W	ASI1	P54074	624 aa		11.06	□□□□□ -0.64
NPL3	YDR432W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	11.06	□□□□□ -0.64	not detected
NPL3	YDR432W	PET191	Q02772	108 aa		11.06	□□□□□ -0.64
NPL3	YDR432W	YMD8	Q03697	442 aa		11.06	□□□□□ -0.64
NPL3	YDR432W	RSA3	Q05942	220 aa	Known RBP	11.06	□□□□□ -0.64
NPL3	YDR432W	RSC58	Q07979	502 aa		11.06	□□□□□ -0.64
NPL3	YDR432W	YDL007C-A	Q2V2Q0	85 aa		11.06	□□□□□ -0.64
NPL3	YDR432W	RPS16A	P0CX51	143 aa	Known RBP	11.05	□□□□□ -0.64
NPL3	YDR432W	RPS16B	P0CX52	143 aa	Known RBP	11.05	□□□□□ -0.64
NPL3	YDR432W	PRP21	P32524	280 aa	Predicted RBP	11.05	□□□□□ -0.64
NPL3	YDR432W	SPC29	P33419	253 aa		11.05	□□□□□ -0.64
NPL3	YDR432W	YHL044W	P38727	235 aa		11.05	□□□□□ -0.64
NPL3	YDR432W	EGD2	P38879	174 aa	Known RBP	11.05	□□□□□ -0.64
NPL3	YDR432W	YER184C	P39961	794 aa		11.05	□□□□□ -0.64
NPL3	YDR432W	CHA4	P43634	648 aa		11.05	□□□□□ -0.64
NPL3	YDR432W	NIT3	P49954	291 aa		11.05	□□□□□ -0.64
NPL3	YDR432W	YDR102C	Q03864	110 aa		11.05	□□□□□ -0.64
NPL3	YDR432W	YLR345W	Q06137	509 aa		11.05	□□□□□ -0.64
NPL3	YDR432W	CTS2	Q06350	511 aa		11.05	□□□□□ -0.64
NPL3	YDR432W	HRT1	Q08273	121 aa		11.05	□□□□□ -0.64
NPL3	YDR432W	UIP4	Q08926	304 aa		11.05	□□□□□ -0.64
NPL3	YDR432W	DPM1	P14020	267 aa	Known RBP	11.04	□□□□□ -0.64
NPL3	YDR432W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	11.04	□□□□□ -0.64	not detected
NPL3	YDR432W	RPS20	P38701	121 aa	Known RBP	11.04	□□□□□ -0.64
NPL3	YDR432W	ISC1	P40015	477 aa	Known RBP	11.04	□□□□□ -0.64
NPL3	YDR432W	CRZ1	P53968	678 aa		11.04	□□□□□ -0.64
NPL3	YDR432W	APM1	Q00776	475 aa	Predicted RBP	11.04	□□□□□ -0.64
NPL3	YDR432W	NUP116	Q02630	1113 aa		11.04	□□□□□ -0.64
NPL3	YDR432W	SRL2	Q12020	392 aa		11.04	□□□□□ -0.64
NPL3	YDR432W	AIR2	Q12476	344 aa	Known RBP	11.04	□□□□□ -0.64
NPL3	YDR432W	NKP1	Q12493	238 aa		11.04	□□□□□ -0.64
NPL3	YDR432W	RPC82	P32349	654 aa		11.03	□□□□□ -0.64
NPL3	YDR432W	SSZ1	P38788	538 aa	Known RBP	11.03	□□□□□ -0.64
NPL3	YDR432W	PIG2	P40187	538 aa		11.03	□□□□□ -0.64
NPL3	YDR432W	YNL165W	P53891	406 aa		11.03	□□□□□ -0.64
NPL3	YDR432W	SKO1	Q02100	647 aa		11.03	□□□□□ -0.64
NPL3	YDR432W	ELP6	Q04868	273 aa		11.03	□□□□□ -0.64
NPL3	YDR432W	MIM1	Q08176	113 aa		11.03	□□□□□ -0.64
NPL3	YDR432W	PST2	Q12335	198 aa	Known RBP	11.03	□□□□□ -0.64
NPL3	YDR432W	OAC1	P32332	324 aa		11.02	□□□□□ -0.65
NPL3	YDR432W	YKL107W	P34251	309 aa		11.02	□□□□□ -0.65
NPL3	YDR432W	MRPL16	P38064	232 aa		11.02	□□□□□ -0.65
NPL3	YDR432W	MLH1	P38920	769 aa		11.02	□□□□□ -0.65
NPL3	YDR432W	SOP4	P39543	234 aa	Predicted RBP	11.02	□□□□□ -0.65
NPL3	YDR432W	SLD3	P53135	668 aa		11.02	□□□□□ -0.65
NPL3	YDR432W	YGL101W	P53144	215 aa		11.02	□□□□□ -0.65
NPL3	YDR432W	MTM1	P53320	366 aa		11.02	□□□□□ -0.65
NPL3	YDR432W	TLG1	Q03322	224 aa		11.02	□□□□□ -0.65
NPL3	YDR432W	IZH2	Q12442	317 aa		11.02	□□□□□ -0.65
NPL3	YDR432W	DAL80	P26343	269 aa		11.01	□□□□□ -0.65
NPL3	YDR432W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	11.01	□□□□□ -0.65	not detected
NPL3	YDR432W	YBR096W	P38256	230 aa		11.01	□□□□□ -0.65
NPL3	YDR432W	MSS4	P38994	779 aa		11.01	□□□□□ -0.65
NPL3	YDR432W	NAS2	P40555	220 aa		11.01	□□□□□ -0.65
NPL3	YDR432W	MSS2	P40990	351 aa		11.01	□□□□□ -0.65
NPL3	YDR432W	SBH2	P52871	88 aa		11.01	□□□□□ -0.65
NPL3	YDR432W	EXG2	P52911	562 aa		11.01	□□□□□ -0.65
NPL3	YDR432W	SNZ1	Q03148	297 aa		11.01	□□□□□ -0.65
NPL3	YDR432W	YTH1	Q06102	208 aa	Predicted RBP	11.01	□□□□□ -0.65
NPL3	YDR432W	RRP15	Q06511	250 aa	Predicted RBP	11.01	□□□□□ -0.65
NPL3	YDR432W	FIT3	Q08907	204 aa		11.01	□□□□□ -0.65
NPL3	YDR432W	SIA1	Q12212	622 aa		11.01	□□□□□ -0.65
NPL3	YDR432W	ECM14	P38836	430 aa		11	□□□□□ -0.65
NPL3	YDR432W	RET2	P43621	546 aa		11	□□□□□ -0.65
NPL3	YDR432W	YDR387C	Q04162	555 aa		11	□□□□□ -0.65
NPL3	YDR432W	AGE1	Q04412	482 aa		11	□□□□□ -0.65
NPL3	YDR432W	ERG4	P25340	473 aa		10.99	□□□□□ -0.65
NPL3	YDR432W	SED4	P25365	1065 aa		10.99	□□□□□ -0.65
NPL3	YDR432W	PPA2	P28239	310 aa		10.99	□□□□□ -0.65
NPL3	YDR432W	CLB6	P32943	380 aa		10.99	□□□□□ -0.65
NPL3	YDR432W	AVT6	P40074	448 aa		10.99	□□□□□ -0.65
NPL3	YDR432W	STB1	P42845	420 aa		10.99	□□□□□ -0.65
NPL3	YDR432W	SED1	Q01589	338 aa		10.99	□□□□□ -0.65
NPL3	YDR432W	OST6	Q03723	332 aa		10.99	□□□□□ -0.65
NPL3	YDR432W	RNH203	Q12338	110 aa		10.99	□□□□□ -0.65
NPL3	YDR432W	ECM4	P36156	370 aa		10.98	□□□□□ -0.65
NPL3	YDR432W	CHL4	P38907	458 aa		10.98	□□□□□ -0.65
NPL3	YDR432W	IPT1	P38954	527 aa		10.98	□□□□□ -0.65
NPL3	YDR432W	YIL029C	P40538	142 aa		10.98	□□□□□ -0.65
NPL3	YDR432W	IRC5	P43610	853 aa		10.98	□□□□□ -0.65
NPL3	YDR432W	TNA1	P53322	534 aa		10.98	□□□□□ -0.65
NPL3	YDR432W	BNA7	Q04066	261 aa		10.98	□□□□□ -0.65
NPL3	YDR432W	YGK3	Q12222	375 aa	Predicted RBP	10.98	□□□□□ -0.65

Retrieved 100 of 5,963 RNA–protein pairs in 46.2 ms