RNA–Protein interactions for RNA: YPR002W

PDH1, Transcript of Putative 2-methylcitrate dehydratase, yeastyeast

Gene PDH1, Length 1,551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDH1YPR002W DPM1P14020 267 aaKnown RBP5.06□□□□□ -1.6
PDH1YPR002W EXG1P23776 448 aaKnown RBP5.06□□□□□ -1.6
PDH1YPR002W HCM1P25364 564 aa5.06□□□□□ -1.6
PDH1YPR002W YMC1P32331 307 aa5.06□□□□□ -1.6
PDH1YPR002W PDR3P33200 976 aa5.06□□□□□ -1.6
PDH1YPR002W THI2P38141 450 aa5.06□□□□□ -1.6
PDH1YPR002W PAU24P38155 120 aa5.06□□□□□ -1.6
PDH1YPR002W RTC2P38279 296 aa5.06□□□□□ -1.6
PDH1YPR002W YHR122WP38829 231 aa5.06□□□□□ -1.6
PDH1YPR002W YER184CP39961 794 aa5.06□□□□□ -1.6
PDH1YPR002W MMF1P40185 145 aaKnown RBP5.06□□□□□ -1.6
PDH1YPR002W BAT2P47176 376 aaKnown RBP5.06□□□□□ -1.6
PDH1YPR002W RAD17P48581 401 aa5.06□□□□□ -1.6
PDH1YPR002W UBC9P50623 157 aaPredicted RBP5.06□□□□□ -1.6
PDH1YPR002W PMT5P52867 743 aa5.06□□□□□ -1.6
PDH1YPR002W COS10P52924 374 aa5.06□□□□□ -1.6
PDH1YPR002W COS12P53053 380 aa5.06□□□□□ -1.6
PDH1YPR002W FMP48P53233 369 aa5.06□□□□□ -1.6
PDH1YPR002W PAU12P53343 120 aa5.06□□□□□ -1.6
PDH1YPR002W INN1P53901 409 aa5.06□□□□□ -1.6
PDH1YPR002W YMR178WQ03219 274 aaKnown RBP5.06□□□□□ -1.6
PDH1YPR002W RSM28Q03430 361 aa5.06□□□□□ -1.6
PDH1YPR002W ROT1Q03691 256 aa5.06□□□□□ -1.6
PDH1YPR002W ARX1Q03862 593 aaKnown RBP5.06□□□□□ -1.6
PDH1YPR002W DCS1Q06151 350 aa5.06□□□□□ -1.6
PDH1YPR002W SKI7Q08491 747 aaPredicted RBP5.06□□□□□ -1.6
PDH1YPR002W YOR289WQ12012 251 aaPredicted RBP5.06□□□□□ -1.6
PDH1YPR002W FRE6Q12473 712 aa5.06□□□□□ -1.6
PDH1YPR002W CDC9P04819 755 aa5.05□□□□□ -1.6
PDH1YPR002W MRP2P10663 115 aaPredicted RBP5.05□□□□□ -1.6
PDH1YPR002W SEC12P11655 471 aa5.05□□□□□ -1.6
PDH1YPR002W YCP4P25349 247 aaKnown RBP5.05□□□□□ -1.6
PDH1YPR002W YCR100CP25606 316 aa5.05□□□□□ -1.6
PDH1YPR002W PRE4P30657 266 aa5.05□□□□□ -1.6
PDH1YPR002W DOA4P32571 926 aa5.05□□□□□ -1.6
PDH1YPR002W SHE2P36068 246 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6not detected
PDH1YPR002W BET3P36149 193 aa5.05□□□□□ -1.6
PDH1YPR002W CHL4P38907 458 aa5.05□□□□□ -1.6
PDH1YPR002W NAB3P38996 802 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6not detected
PDH1YPR002W GID8P40208 455 aa5.05□□□□□ -1.6
PDH1YPR002W YJL068CP40363 299 aa5.05□□□□□ -1.6
PDH1YPR002W BAP3P41815 604 aa5.05□□□□□ -1.6
PDH1YPR002W MAL11P53048 616 aa5.05□□□□□ -1.6
PDH1YPR002W HOS2P53096 452 aaPredicted RBP5.05□□□□□ -1.6
PDH1YPR002W ROG1P53118 685 aa5.05□□□□□ -1.6
PDH1YPR002W JAC1P53193 184 aa5.05□□□□□ -1.6
PDH1YPR002W ALG12P53730 551 aa5.05□□□□□ -1.6
PDH1YPR002W SIZ1Q04195 904 aa5.05□□□□□ -1.6
PDH1YPR002W UTP21Q06078 939 aaPredicted RBP5.05□□□□□ -1.6
PDH1YPR002W KEI1Q06346 221 aa5.05□□□□□ -1.6
PDH1YPR002W SPC3Q12133 184 aa5.05□□□□□ -1.6
PDH1YPR002W INP53Q12271 1107 aa5.05□□□□□ -1.6
PDH1YPR002W YPR071WQ12346 211 aa5.05□□□□□ -1.6
PDH1YPR002W SKM1Q12469 655 aa5.05□□□□□ -1.6
PDH1YPR002W AAC1P04710 309 aa5.04□□□□□ -1.6
PDH1YPR002W YOL162WP0CF19 215 aa5.04□□□□□ -1.6
PDH1YPR002W HOM2P13663 365 aaKnown RBP5.04□□□□□ -1.6
PDH1YPR002W HOP1P20050 605 aa5.04□□□□□ -1.6
PDH1YPR002W APN1P22936 367 aa5.04□□□□□ -1.6
PDH1YPR002W PEX1P24004 1043 aa5.04□□□□□ -1.6
PDH1YPR002W RNA14P25298 677 aaKnown RBP5.04□□□□□ -1.6
PDH1YPR002W PXA2P34230 853 aa5.04□□□□□ -1.6
PDH1YPR002W SDS22P36047 338 aa5.04□□□□□ -1.6
PDH1YPR002W DTR1P38125 572 aa5.04□□□□□ -1.6
PDH1YPR002W GIM4P40005 111 aaKnown RBP5.04□□□□□ -1.6
PDH1YPR002W RTT105P40063 208 aa5.04□□□□□ -1.6
PDH1YPR002W BNA6P43619 295 aa5.04□□□□□ -1.6
PDH1YPR002W DPB11P47027 764 aaPredicted RBP5.04□□□□□ -1.6
PDH1YPR002W SPT20P50875 604 aa5.04□□□□□ -1.6
PDH1YPR002W ART5P53244 586 aaKnown RBP5.04□□□□□ -1.6
PDH1YPR002W VOA1P53262 265 aa5.04□□□□□ -1.6
PDH1YPR002W VPS62P53285 467 aa5.04□□□□□ -1.6
PDH1YPR002W CAF40P53829 373 aa5.04□□□□□ -1.6
PDH1YPR002W PGA1P53896 198 aa5.04□□□□□ -1.6
PDH1YPR002W RHO4Q00246 291 aa5.04□□□□□ -1.6
PDH1YPR002W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
PDH1YPR002W CTL1Q03220 320 aaKnown RBP5.04□□□□□ -1.6
PDH1YPR002W RRN11Q04712 507 aa5.04□□□□□ -1.6
PDH1YPR002W YMR252CQ04814 134 aa5.04□□□□□ -1.6
PDH1YPR002W GAS2Q06135 555 aa5.04□□□□□ -1.6
PDH1YPR002W CRT10Q08226 957 aa5.04□□□□□ -1.6
PDH1YPR002W REX4Q08237 289 aa5.04□□□□□ -1.6
PDH1YPR002W TPO4Q12256 659 aa5.04□□□□□ -1.6
PDH1YPR002W YPR117WQ06116 2489 aa5.04□□□□□ -1.6
PDH1YPR002W PUT1P09368 476 aa5.04□□□□□ -1.6
PDH1YPR002W PRP2P20095 876 aaPredicted RBP5.04□□□□□ -1.6
PDH1YPR002W FUN26P31381 517 aa5.04□□□□□ -1.6
PDH1YPR002W BNA4P38169 460 aa5.04□□□□□ -1.6
PDH1YPR002W YMR144WP40214 342 aaKnown RBP5.04□□□□□ -1.6
PDH1YPR002W AIM25P47140 327 aa5.04□□□□□ -1.6
PDH1YPR002W SDT1P53078 280 aa5.04□□□□□ -1.6
PDH1YPR002W GPG1P53130 126 aa5.04□□□□□ -1.6
PDH1YPR002W SLI1P53304 468 aa5.04□□□□□ -1.6
PDH1YPR002W ASI3P53983 676 aa5.04□□□□□ -1.6
PDH1YPR002W KAP120Q02932 1032 aa5.04□□□□□ -1.6
PDH1YPR002W VBA1Q04301 562 aa5.04□□□□□ -1.6
PDH1YPR002W SUL2Q12325 893 aa5.04□□□□□ -1.6
PDH1YPR002W PDH1Q12428 516 aaKnown RBP5.04□□□□□ -1.6
PDH1YPR002W YPR064WQ12492 139 aa5.04□□□□□ -1.6
PDH1YPR002W YOS9Q99220 542 aa5.04□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms