RNA–Protein interactions for RNA: YMR117C

SPC24, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC24, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC24YMR117C AIM20P40451 204 aa3.64□□□□□ -1.83
SPC24YMR117C YIL054WP40524 105 aa3.64□□□□□ -1.83
SPC24YMR117C IRC4Q03036 179 aa3.64□□□□□ -1.83
SPC24YMR117C UBX2Q04228 584 aa3.64□□□□□ -1.83
SPC24YMR117C VTI1Q04338 217 aa3.64□□□□□ -1.83
SPC24YMR117C YLR297WQ05899 129 aa3.64□□□□□ -1.83
SPC24YMR117C YPL245WQ12179 454 aaKnown RBP3.64□□□□□ -1.83
SPC24YMR117C ZRT3P34240 503 aa3.63□□□□□ -1.83
SPC24YMR117C END3P39013 349 aa3.63□□□□□ -1.83
SPC24YMR117C ZRG17P53735 605 aa3.63□□□□□ -1.83
SPC24YMR117C CAB5Q03941 241 aa3.63□□□□□ -1.83
SPC24YMR117C VPS20Q04272 221 aa3.63□□□□□ -1.83
SPC24YMR117C YPR195CQ06594 109 aa3.63□□□□□ -1.83
SPC24YMR117C MIM1Q08176 113 aa3.63□□□□□ -1.83
SPC24YMR117C ERD1P16151 362 aa3.62□□□□□ -1.83
SPC24YMR117C AST1P35183 429 aa3.62□□□□□ -1.83
SPC24YMR117C PRY2P36110 329 aa3.62□□□□□ -1.83
SPC24YMR117C POP2P39008 433 aa3.62□□□□□ -1.83
SPC24YMR117C SLM1P40485 686 aa3.62□□□□□ -1.83
SPC24YMR117C PRO2P54885 456 aaKnown RBP3.62□□□□□ -1.83
SPC24YMR117C SMD1Q02260 146 aaPredicted RBP3.62□□□□□ -1.83
SPC24YMR117C ECM19Q06011 112 aa3.62□□□□□ -1.83
SPC24YMR117C DIB1Q06819 143 aaPredicted RBP3.62□□□□□ -1.83
SPC24YMR117C RTC5Q12108 567 aaKnown RBP3.62□□□□□ -1.83
SPC24YMR117C STF1P01098 86 aa3.61□□□□□ -1.83
SPC24YMR117C CUP2P15315 225 aa3.61□□□□□ -1.83
SPC24YMR117C MRPL20P22354 195 aaPredicted RBP3.61□□□□□ -1.83
SPC24YMR117C SUR1P33300 382 aa3.61□□□□□ -1.83
SPC24YMR117C SWC5P38326 303 aa3.61□□□□□ -1.83
SPC24YMR117C YMR262WP38430 313 aa3.61□□□□□ -1.83
SPC24YMR117C YHR035WP38769 630 aa3.61□□□□□ -1.83
SPC24YMR117C DSE1P40077 573 aa3.61□□□□□ -1.83
SPC24YMR117C YFL040WP43562 540 aa3.61□□□□□ -1.83
SPC24YMR117C YPL080CQ02826 108 aa3.61□□□□□ -1.83
SPC24YMR117C REX3Q12090 404 aa3.61□□□□□ -1.83
SPC24YMR117C YPS3Q12303 508 aa3.61□□□□□ -1.83
SPC24YMR117C YPR1Q12458 312 aa3.61□□□□□ -1.83
SPC24YMR117C CBP2P03874 630 aaPredicted RBP3.6□□□□□ -1.83
SPC24YMR117C MSS116P15424 664 aaKnown RBP3.6□□□□□ -1.83
SPC24YMR117C CPT1P17898 393 aa3.6□□□□□ -1.83
SPC24YMR117C ZRT1P32804 376 aa3.6□□□□□ -1.83
SPC24YMR117C YKL162CP36052 402 aa3.6□□□□□ -1.83
SPC24YMR117C YDR089WP38966 869 aa3.6□□□□□ -1.83
SPC24YMR117C OKP1P53298 406 aa3.6□□□□□ -1.83
SPC24YMR117C SAM4Q08985 325 aaKnown RBP3.6□□□□□ -1.83
SPC24YMR117C TRM10Q12400 293 aa3.6□□□□□ -1.83
SPC24YMR117C AGA2P32781 87 aa3.59□□□□□ -1.83
SPC24YMR117C PET8P38921 284 aa3.59□□□□□ -1.83
SPC24YMR117C SOP4P39543 234 aaPredicted RBP3.59□□□□□ -1.83
SPC24YMR117C YGL118CP53132 145 aa3.59□□□□□ -1.83
SPC24YMR117C YNR066CP53752 436 aa3.59□□□□□ -1.83
SPC24YMR117C SNX41Q04053 625 aa3.59□□□□□ -1.83
SPC24YMR117C VIK1Q12045 647 aa3.59□□□□□ -1.83
SPC24YMR117C TFC7Q12415 435 aa3.59□□□□□ -1.83
SPC24YMR117C BI3Q9ZZW7 517 aa3.59□□□□□ -1.83
SPC24YMR117C GCD2P12754 651 aaPredicted RBP3.58□□□□□ -1.84
SPC24YMR117C RPB9P27999 122 aa3.58□□□□□ -1.84
SPC24YMR117C SLX1P38324 304 aa3.58□□□□□ -1.84
SPC24YMR117C YIL059CP40520 121 aa3.58□□□□□ -1.84
SPC24YMR117C COS4P43542 379 aa3.58□□□□□ -1.84
SPC24YMR117C CPR7P47103 393 aa3.58□□□□□ -1.84
SPC24YMR117C CAX4P53223 239 aa3.58□□□□□ -1.84
SPC24YMR117C UTP23Q12339 254 aaKnown RBP3.58□□□□□ -1.84
SPC24YMR117C PAA1Q12447 191 aaKnown RBP3.58□□□□□ -1.84
SPC24YMR117C INO2P26798 304 aa3.57□□□□□ -1.84
SPC24YMR117C FET3P38993 636 aa3.57□□□□□ -1.84
SPC24YMR117C OSW5P40219 148 aa3.57□□□□□ -1.84
SPC24YMR117C ASG7P46993 209 aa3.57□□□□□ -1.84
SPC24YMR117C ABZ2Q03266 374 aa3.57□□□□□ -1.84
SPC24YMR117C LOH1P47055 219 aa3.56□□□□□ -1.84
SPC24YMR117C RIB4P50861 169 aaPredicted RBP3.56□□□□□ -1.84
SPC24YMR117C YGR266WP53326 701 aa3.56□□□□□ -1.84
SPC24YMR117C LAG2Q92325 660 aa3.56□□□□□ -1.84
SPC24YMR117C TDH3P00359 332 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
SPC24YMR117C ASP1P38986 381 aaPredicted RBP3.55□□□□□ -1.84
SPC24YMR117C VOA1P53262 265 aa3.55□□□□□ -1.84
SPC24YMR117C DBP6P53734 629 aaKnown RBP3.55□□□□□ -1.84
SPC24YMR117C PBP4Q07362 185 aaKnown RBP3.55□□□□□ -1.84
SPC24YMR117C IZH4Q99393 312 aa3.55□□□□□ -1.84
SPC24YMR117C CAR2P07991 424 aaKnown RBP3.54□□□□□ -1.84
SPC24YMR117C IFM1P25038 676 aa3.54□□□□□ -1.84
SPC24YMR117C RPL5P26321 297 aaKnown RBP3.54□□□□□ -1.84
SPC24YMR117C CSE1P33307 960 aa3.54□□□□□ -1.84
SPC24YMR117C MCH2P36032 473 aa3.54□□□□□ -1.84
SPC24YMR117C SWC4P53201 476 aa3.54□□□□□ -1.84
SPC24YMR117C SEC13Q04491 297 aaKnown RBP3.54□□□□□ -1.84
SPC24YMR117C RFM1Q12192 310 aa3.54□□□□□ -1.84
SPC24YMR117C MDY2Q12285 212 aa3.54□□□□□ -1.84
SPC24YMR117C PRP46Q12417 451 aaPredicted RBP3.54□□□□□ -1.84
SPC24YMR117C DCP1Q12517 231 aaPredicted RBP3.54□□□□□ -1.84
SPC24YMR117C SAR1P20606 190 aaKnown RBP3.53□□□□□ -1.84
SPC24YMR117C RPL16BP26785 198 aaKnown RBP3.53□□□□□ -1.84
SPC24YMR117C VPH2P32341 215 aa3.53□□□□□ -1.84
SPC24YMR117C IME2P32581 645 aa3.53□□□□□ -1.84
SPC24YMR117C EDC2P40023 145 aaPredicted RBP3.53□□□□□ -1.84
SPC24YMR117C CDC40P40968 455 aaPredicted RBP3.53□□□□□ -1.84
SPC24YMR117C COX16P47081 118 aa3.53□□□□□ -1.84
SPC24YMR117C YLR446WQ06204 433 aa3.53□□□□□ -1.84
SPC24YMR117C YOR292CQ08743 309 aa3.53□□□□□ -1.84
SPC24YMR117C APC9Q12107 265 aa3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms