RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C IRC19Q07843 230 aa9.39□□□□□ -0.91
SHM2YLR058C IES5P40060 125 aa9.38□□□□□ -0.91
SHM2YLR058C NAS2P40555 220 aa9.38□□□□□ -0.91
SHM2YLR058C REE1P40893 198 aa9.38□□□□□ -0.91
SHM2YLR058C PHB1P40961 287 aa9.38□□□□□ -0.91
SHM2YLR058C IRC5P43610 853 aa9.38□□□□□ -0.91
SHM2YLR058C OGG1P53397 376 aaPredicted RBP9.38□□□□□ -0.91
SHM2YLR058C PDR16P53860 351 aaKnown RBP9.38□□□□□ -0.91
SHM2YLR058C MTR10Q99189 972 aa9.38□□□□□ -0.91
SHM2YLR058C GAS1P22146 559 aaKnown RBP9.37□□□□□ -0.91
SHM2YLR058C PAD1P33751 242 aaKnown RBP RIP-Chip data9.37□□□□□ -0.91not detected
SHM2YLR058C SHE1P38200 338 aa9.37□□□□□ -0.91
SHM2YLR058C SHO1P40073 367 aa9.37□□□□□ -0.91
SHM2YLR058C BUR6P40096 142 aa9.37□□□□□ -0.91
SHM2YLR058C PBP1P53297 722 aaKnown RBP9.37□□□□□ -0.91
SHM2YLR058C MAK3Q03503 176 aa9.37□□□□□ -0.91
SHM2YLR058C SCS7Q03529 384 aa9.37□□□□□ -0.91
SHM2YLR058C YLR346CQ06139 101 aa9.37□□□□□ -0.91
SHM2YLR058C YLR173WQ06247 608 aa9.37□□□□□ -0.91
SHM2YLR058C TAZ1Q06510 381 aa9.37□□□□□ -0.91
SHM2YLR058C RDL2Q08742 149 aaKnown RBP9.37□□□□□ -0.91
SHM2YLR058C RKM1Q08961 583 aaPredicted RBP9.37□□□□□ -0.91
SHM2YLR058C PEP4P07267 405 aaKnown RBP9.36□□□□□ -0.91
SHM2YLR058C YFR010W-AP0C5N0 62 aa9.36□□□□□ -0.91
SHM2YLR058C MAL32P38158 584 aa9.36□□□□□ -0.91
SHM2YLR058C MOH1P38191 138 aa9.36□□□□□ -0.91
SHM2YLR058C HIS6P40545 261 aa9.36□□□□□ -0.91
SHM2YLR058C BRR6P53062 197 aa9.36□□□□□ -0.91
SHM2YLR058C YGR126WP53274 230 aa9.36□□□□□ -0.91
SHM2YLR058C MAL12P53341 584 aa9.36□□□□□ -0.91
SHM2YLR058C YPL039WQ03080 316 aa9.36□□□□□ -0.91
SHM2YLR058C SDC1Q03323 175 aa9.36□□□□□ -0.91
SHM2YLR058C YMR315WQ04869 349 aaKnown RBP9.36□□□□□ -0.91
SHM2YLR058C FPS1P23900 669 aa9.35□□□□□ -0.91
SHM2YLR058C DPB2P24482 689 aaPredicted RBP9.35□□□□□ -0.91
SHM2YLR058C CHK1P38147 527 aa9.35□□□□□ -0.91
SHM2YLR058C APD1P38281 316 aa9.35□□□□□ -0.91
SHM2YLR058C DDI1P40087 428 aa9.35□□□□□ -0.91
SHM2YLR058C NIT2P47016 307 aa9.35□□□□□ -0.91
SHM2YLR058C THP3Q12049 470 aaKnown RBP9.35□□□□□ -0.91
SHM2YLR058C SEC12P11655 471 aa9.34□□□□□ -0.91
SHM2YLR058C NFS1P25374 497 aa9.34□□□□□ -0.91
SHM2YLR058C ARO7P32178 256 aa9.34□□□□□ -0.91
SHM2YLR058C MLH1P38920 769 aa9.34□□□□□ -0.91
SHM2YLR058C SFH5P47008 294 aa9.34□□□□□ -0.91
SHM2YLR058C YGR066CP53242 292 aa9.34□□□□□ -0.91
SHM2YLR058C SUR7P54003 302 aa9.34□□□□□ -0.91
SHM2YLR058C RRP17Q04031 235 aaPredicted RBP9.34□□□□□ -0.91
SHM2YLR058C FMP42Q04991 504 aa9.34□□□□□ -0.91
SHM2YLR058C RRP9Q06506 573 aaKnown RBP9.34□□□□□ -0.91
SHM2YLR058C YPR147CQ06522 304 aaKnown RBP9.34□□□□□ -0.91
SHM2YLR058C FRE5Q08908 694 aa9.34□□□□□ -0.91
SHM2YLR058C YDL176WQ12027 708 aa9.34□□□□□ -0.91
SHM2YLR058C PRP8P33334 2413 aaKnown RBP9.33□□□□□ -0.92
SHM2YLR058C FLO9P39712 1322 aa9.33□□□□□ -0.92
SHM2YLR058C YAL064W-BO13512 126 aa9.33□□□□□ -0.92
SHM2YLR058C KIN28P06242 306 aa9.33□□□□□ -0.92
SHM2YLR058C ADH7P25377 361 aa9.33□□□□□ -0.92
SHM2YLR058C ATS1P31386 333 aa9.33□□□□□ -0.92
SHM2YLR058C VBA2P38358 474 aaKnown RBP9.33□□□□□ -0.92
SHM2YLR058C NVJ1P38881 321 aa9.33□□□□□ -0.92
SHM2YLR058C PHO90P39535 881 aa9.33□□□□□ -0.92
SHM2YLR058C RPS26AP39938 119 aaKnown RBP9.33□□□□□ -0.92
SHM2YLR058C RPS26BP39939 119 aaKnown RBP9.33□□□□□ -0.92
SHM2YLR058C YIL169CP40442 995 aa9.33□□□□□ -0.92
SHM2YLR058C YGL260WP53056 76 aa9.33□□□□□ -0.92
SHM2YLR058C MCM21Q06675 368 aa9.33□□□□□ -0.92
SHM2YLR058C TMS1Q12116 473 aa9.33□□□□□ -0.92
SHM2YLR058C YBR056W-AI2HB52 66 aa9.32□□□□□ -0.92
SHM2YLR058C CDC9P04819 755 aa9.32□□□□□ -0.92
SHM2YLR058C RPL7AP05737 244 aaKnown RBP9.32□□□□□ -0.92
SHM2YLR058C PDX1P16451 410 aa9.32□□□□□ -0.92
SHM2YLR058C ECT1P33412 323 aa9.32□□□□□ -0.92
SHM2YLR058C COS9P36034 407 aa9.32□□□□□ -0.92
SHM2YLR058C YPK3P38070 525 aa9.32□□□□□ -0.92
SHM2YLR058C RFC4P40339 323 aaKnown RBP9.32□□□□□ -0.92
SHM2YLR058C FMC1P40491 155 aa9.32□□□□□ -0.92
SHM2YLR058C PFS2P42841 465 aaKnown RBP9.32□□□□□ -0.92
SHM2YLR058C PRY1P47032 299 aa9.32□□□□□ -0.92
SHM2YLR058C LYS5P50113 272 aa9.32□□□□□ -0.92
SHM2YLR058C VOA1P53262 265 aa9.32□□□□□ -0.92
SHM2YLR058C NUP116Q02630 1113 aa9.32□□□□□ -0.92
SHM2YLR058C VBA4Q04602 768 aaKnown RBP9.32□□□□□ -0.92
SHM2YLR058C GAL83Q04739 417 aa9.32□□□□□ -0.92
SHM2YLR058C GRE1Q08969 168 aa9.32□□□□□ -0.92
SHM2YLR058C RPL7BQ12213 244 aaKnown RBP9.32□□□□□ -0.92
SHM2YLR058C MDH2P22133 377 aa9.31□□□□□ -0.92
SHM2YLR058C RPB10P22139 70 aa9.31□□□□□ -0.92
SHM2YLR058C FUN19P28003 413 aaPredicted RBP9.31□□□□□ -0.92
SHM2YLR058C PPA2P28239 310 aa9.31□□□□□ -0.92
SHM2YLR058C DTR1P38125 572 aa9.31□□□□□ -0.92
SHM2YLR058C STS1P38637 319 aa9.31□□□□□ -0.92
SHM2YLR058C YER184CP39961 794 aa9.31□□□□□ -0.92
SHM2YLR058C YEL057CP39983 233 aa9.31□□□□□ -0.92
SHM2YLR058C PCL6P40038 420 aa9.31□□□□□ -0.92
SHM2YLR058C YIL165CP40446 119 aa9.31□□□□□ -0.92
SHM2YLR058C PPT1P53043 513 aa9.31□□□□□ -0.92
SHM2YLR058C SCW11P53189 542 aa9.31□□□□□ -0.92
SHM2YLR058C MDM36Q06820 579 aa9.31□□□□□ -0.92
SHM2YLR058C YOR238WQ08634 303 aa9.31□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 288.9 ms