RNA–Protein interactions for RNA: YJR109C

CPA2, Transcript of Large subunit of carbamoyl phosphate synthetase, yeast

Gene CPA2, Length 3,357 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CPA2	YJR109C	SLM3	Q12093	417 aa		3.14	□□□□□ -1.91
CPA2	YJR109C	RPN6	Q12377	434 aa		3.14	□□□□□ -1.91
CPA2	YJR109C	TUS1	Q06412	1307 aa		3.14	□□□□□ -1.91
CPA2	YJR109C	POX1	P13711	748 aa		3.14	□□□□□ -1.91
CPA2	YJR109C	ARO7	P32178	256 aa		3.14	□□□□□ -1.91
CPA2	YJR109C	TMT1	P32643	299 aa		3.14	□□□□□ -1.91
CPA2	YJR109C	YJR056C	P47115	236 aa		3.14	□□□□□ -1.91
CPA2	YJR109C	SSN8	P47821	323 aa		3.14	□□□□□ -1.91
CPA2	YJR109C	YPL014W	Q02606	381 aa		3.14	□□□□□ -1.91
CPA2	YJR109C	ARO80	Q04052	950 aa		3.14	□□□□□ -1.91
CPA2	YJR109C	GAT3	Q07928	141 aa		3.14	□□□□□ -1.91
CPA2	YJR109C	COQ10	Q08058	207 aa		3.14	□□□□□ -1.91
CPA2	YJR109C	YDL009C	Q12210	107 aa		3.14	□□□□□ -1.91
CPA2	YJR109C	RDL1	Q12305	139 aa	Known RBP	3.14	□□□□□ -1.91
CPA2	YJR109C	WIP1	Q2V2P8	89 aa		3.14	□□□□□ -1.91
CPA2	YJR109C	EFG1	Q3E705	233 aa	Known RBP	3.14	□□□□□ -1.91
CPA2	YJR109C	YER145C-A	A0A023PYF4	145 aa		3.13	□□□□□ -1.91
CPA2	YJR109C	REP1	P03871	373 aa		3.13	□□□□□ -1.91
CPA2	YJR109C	DSF1	P0CX08	502 aa		3.13	□□□□□ -1.91
CPA2	YJR109C	YNR073C	P0CX09	502 aa		3.13	□□□□□ -1.91
CPA2	YJR109C	SNA3	P14359	133 aa		3.13	□□□□□ -1.91
CPA2	YJR109C	YKR041W	P36134	250 aa		3.13	□□□□□ -1.91
CPA2	YJR109C	SHG1	P38337	142 aa		3.13	□□□□□ -1.91
CPA2	YJR109C	IDP2	P41939	412 aa		3.13	□□□□□ -1.91
CPA2	YJR109C	GPI1	P53306	609 aa		3.13	□□□□□ -1.91
CPA2	YJR109C	MMT2	Q08970	484 aa		3.13	□□□□□ -1.91
CPA2	YJR109C	TIR4	Q12218	487 aa	Predicted RBP	3.13	□□□□□ -1.91
CPA2	YJR109C	YOR114W	Q12219	294 aa		3.13	□□□□□ -1.91
CPA2	YJR109C	AHA1	Q12449	350 aa	Known RBP	3.13	□□□□□ -1.91
CPA2	YJR109C	QCR2	P07257	368 aa		3.13	□□□□□ -1.91
CPA2	YJR109C	CBF1	P17106	351 aa		3.13	□□□□□ -1.91
CPA2	YJR109C	MUD1	P32605	298 aa	Known RBP	3.13	□□□□□ -1.91
CPA2	YJR109C	CAT2	P32796	670 aa	Known RBP	3.13	□□□□□ -1.91
CPA2	YJR109C	RIM2	P38127	377 aa		3.13	□□□□□ -1.91
CPA2	YJR109C	LYS1	P38998	373 aa	RIP-Chip data	3.13	□□□□□ -1.91	not detected
CPA2	YJR109C	RRT5	P43607	289 aa		3.13	□□□□□ -1.91
CPA2	YJR109C	TOS8	P53147	276 aa		3.13	□□□□□ -1.91
CPA2	YJR109C	COS6	P53344	381 aa		3.13	□□□□□ -1.91
CPA2	YJR109C	CAF40	P53829	373 aa		3.13	□□□□□ -1.91
CPA2	YJR109C	NRK1	P53915	240 aa		3.13	□□□□□ -1.91
CPA2	YJR109C	TMN2	Q04562	672 aa		3.13	□□□□□ -1.91
CPA2	YJR109C	MRPL51	Q06090	140 aa	Predicted RBP	3.13	□□□□□ -1.91
CPA2	YJR109C	MCH4	Q08268	501 aa		3.13	□□□□□ -1.91
CPA2	YJR109C	SAM4	Q08985	325 aa	Known RBP	3.13	□□□□□ -1.91
CPA2	YJR109C	YRA1	Q12159	226 aa	Known RBP	3.13	□□□□□ -1.91
CPA2	YJR109C	RFM1	Q12192	310 aa		3.13	□□□□□ -1.91
CPA2	YJR109C	WTM1	Q12363	437 aa	Known RBP	3.13	□□□□□ -1.91
CPA2	YJR109C	SSC1	P0CS90	654 aa	Known RBP	3.12	□□□□□ -1.91
CPA2	YJR109C	POF1	P25576	258 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	OSH3	P38713	996 aa	Known RBP	3.12	□□□□□ -1.91
CPA2	YJR109C	YAP3	P38749	330 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	TDA11	P38854	504 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	RPH1	P39956	796 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	ARG2	P40360	574 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	MDV1	P47025	714 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	PRP24	P49960	444 aa	Known RBP	3.12	□□□□□ -1.91
CPA2	YJR109C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
CPA2	YJR109C	DID2	P69771	204 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	CCE1	Q03702	353 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	TRS23	Q03784	219 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	ECM11	Q04110	302 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	THI7	Q05998	598 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	YLR111W	Q12528	110 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	FOL3	Q12676	427 aa	Predicted RBP	3.12	□□□□□ -1.91
CPA2	YJR109C	CSR2	Q12734	1121 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	SEC4	P07560	215 aa	Known RBP	3.12	□□□□□ -1.91
CPA2	YJR109C	SLM5	P25345	492 aa	Known RBP	3.12	□□□□□ -1.91
CPA2	YJR109C	MRPL9	P31334	269 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	THI80	P35202	319 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	FAA2	P39518	744 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	MST28	P39552	234 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	RBG1	P39729	369 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	EDC3	P39998	551 aa	Known RBP	3.12	□□□□□ -1.91
CPA2	YJR109C	COX15	P40086	486 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	PRY1	P47032	299 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	YJR054W	P47114	497 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	SMM1	P53720	384 aa	Known RBP	3.12	□□□□□ -1.91
CPA2	YJR109C	RCF2	P53721	224 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	TPS1	Q00764	495 aa	Known RBP	3.12	□□□□□ -1.91
CPA2	YJR109C	CTL1	Q03220	320 aa	Known RBP	3.12	□□□□□ -1.91
CPA2	YJR109C	HER2	Q03557	464 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	FAR10	Q06001	478 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	PBP4	Q07362	185 aa	Known RBP	3.12	□□□□□ -1.91
CPA2	YJR109C	PLB3	Q08108	686 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	HNT3	Q08702	217 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	RDI1	Q12434	202 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	PHO80	P20052	293 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	YCR006C	P25350	157 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	APE2	P32454	952 aa	Known RBP	3.12	□□□□□ -1.91
CPA2	YJR109C	LIP5	P32875	414 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	ATO2	P32907	282 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	PAC2	P39937	518 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	MMF1	P40185	145 aa	Known RBP	3.12	□□□□□ -1.91
CPA2	YJR109C	YPT11	P48559	417 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	FRE4	P53746	719 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	YPL080C	Q02826	108 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	PFA5	Q03289	374 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	TDA6	Q06466	467 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	YDL199C	Q12407	687 aa		3.12	□□□□□ -1.91
CPA2	YJR109C	IFM1	P25038	676 aa		3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms