RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W FAR8Q05040 523 aa0.94□□□□□ -2.26
SMC1YFL008W YPL225WQ08971 146 aaKnown RBP0.94□□□□□ -2.26
SMC1YFL008W YDR061WQ12298 539 aa0.94□□□□□ -2.26
SMC1YFL008W RPS3P05750 240 aaKnown RBP0.94□□□□□ -2.26
SMC1YFL008W DAL2P25335 343 aa0.94□□□□□ -2.26
SMC1YFL008W FAA1P30624 700 aaKnown RBP0.94□□□□□ -2.26
SMC1YFL008W SKN1P33336 771 aa0.94□□□□□ -2.26
SMC1YFL008W UIP5P36137 443 aa0.94□□□□□ -2.26
SMC1YFL008W YBL028CP38202 106 aa0.94□□□□□ -2.26
SMC1YFL008W RRP3P38712 501 aaKnown RBP0.94□□□□□ -2.26
SMC1YFL008W WSC4P38739 605 aa0.94□□□□□ -2.26
SMC1YFL008W PEX18P38855 283 aa0.94□□□□□ -2.26
SMC1YFL008W YHB1P39676 399 aaKnown RBP0.94□□□□□ -2.26
SMC1YFL008W SEN34P39707 275 aa0.94□□□□□ -2.26
SMC1YFL008W SER33P40510 469 aa0.94□□□□□ -2.26
SMC1YFL008W LOC1P43586 204 aaPredicted RBP0.94□□□□□ -2.26
SMC1YFL008W LSM1P47017 172 aaKnown RBP0.94□□□□□ -2.26
SMC1YFL008W YJR054WP47114 497 aa0.94□□□□□ -2.26
SMC1YFL008W GET1P53192 235 aa0.94□□□□□ -2.26
SMC1YFL008W PRO2P54885 456 aaKnown RBP0.94□□□□□ -2.26
SMC1YFL008W RPT6Q01939 405 aaKnown RBP0.94□□□□□ -2.26
SMC1YFL008W YMR102CQ03177 834 aa0.94□□□□□ -2.26
SMC1YFL008W HOT1Q03213 719 aa0.94□□□□□ -2.26
SMC1YFL008W ARO80Q04052 950 aa0.94□□□□□ -2.26
SMC1YFL008W SXM1Q04175 944 aaKnown RBP0.94□□□□□ -2.26
SMC1YFL008W VPS20Q04272 221 aa0.94□□□□□ -2.26
SMC1YFL008W ATG38Q05789 226 aaKnown RBP0.94□□□□□ -2.26
SMC1YFL008W YET3Q07451 203 aa0.94□□□□□ -2.26
SMC1YFL008W YPD1Q07688 167 aa0.94□□□□□ -2.26
SMC1YFL008W VPS54Q12071 889 aa0.94□□□□□ -2.26
SMC1YFL008W FCY22Q12119 530 aa0.94□□□□□ -2.26
SMC1YFL008W YOR012WQ12351 137 aa0.94□□□□□ -2.26
SMC1YFL008W EMP46Q12396 444 aa0.94□□□□□ -2.26
SMC1YFL008W CKA2P19454 339 aa0.93□□□□□ -2.26
SMC1YFL008W MEI4P29467 408 aa0.93□□□□□ -2.26
SMC1YFL008W TFB1P32776 642 aa0.93□□□□□ -2.26
SMC1YFL008W UTP11P34247 250 aaPredicted RBP0.93□□□□□ -2.26
SMC1YFL008W KDX1P36005 433 aa0.93□□□□□ -2.26
SMC1YFL008W ATP3P38077 311 aaKnown RBP0.93□□□□□ -2.26
SMC1YFL008W MAK5P38112 773 aaPredicted RBP0.93□□□□□ -2.26
SMC1YFL008W FCY21P40039 528 aa0.93□□□□□ -2.26
SMC1YFL008W RTT105P40063 208 aa0.93□□□□□ -2.26
SMC1YFL008W SLM1P40485 686 aa0.93□□□□□ -2.26
SMC1YFL008W UFE1P41834 346 aa0.93□□□□□ -2.26
SMC1YFL008W CPR7P47103 393 aa0.93□□□□□ -2.26
SMC1YFL008W YGL138CP53122 345 aa0.93□□□□□ -2.26
SMC1YFL008W MLC1P53141 149 aa0.93□□□□□ -2.26
SMC1YFL008W MKC7P53379 596 aa0.93□□□□□ -2.26
SMC1YFL008W GIM3P53900 129 aa0.93□□□□□ -2.26
SMC1YFL008W YKR005CQ02203 525 aa0.93□□□□□ -2.26
SMC1YFL008W MRPS16Q02608 121 aa0.93□□□□□ -2.26
SMC1YFL008W CSN9Q03981 162 aa0.93□□□□□ -2.26
SMC1YFL008W YMR226CQ05016 267 aaKnown RBP0.93□□□□□ -2.26
SMC1YFL008W SPO77Q06134 477 aa0.93□□□□□ -2.26
SMC1YFL008W YPR091CQ06833 770 aa0.93□□□□□ -2.26
SMC1YFL008W MIM1Q08176 113 aa0.93□□□□□ -2.26
SMC1YFL008W SMF3Q12078 473 aaPredicted RBP0.93□□□□□ -2.26
SMC1YFL008W APC2Q12440 853 aa0.93□□□□□ -2.26
SMC1YFL008W RAX2Q12465 1220 aa0.93□□□□□ -2.26
SMC1YFL008W CMD1P06787 147 aaKnown RBP0.93□□□□□ -2.26
SMC1YFL008W HSP30P25619 332 aa0.93□□□□□ -2.26
SMC1YFL008W SPP381P38282 291 aaPredicted RBP0.93□□□□□ -2.26
SMC1YFL008W SPL2P38839 148 aa0.93□□□□□ -2.26
SMC1YFL008W TDA11P38854 504 aa0.93□□□□□ -2.26
SMC1YFL008W TRF5P48561 642 aaKnown RBP0.93□□□□□ -2.26
SMC1YFL008W YGR067CP53243 804 aa0.93□□□□□ -2.26
SMC1YFL008W APJ1P53940 528 aa0.93□□□□□ -2.26
SMC1YFL008W VPS9P54787 451 aa0.93□□□□□ -2.26
SMC1YFL008W PRP38Q00723 242 aaPredicted RBP0.93□□□□□ -2.26
SMC1YFL008W SLT2Q00772 484 aa0.93□□□□□ -2.26
SMC1YFL008W RRN5Q02983 363 aa0.93□□□□□ -2.26
SMC1YFL008W RVB1Q03940 463 aaKnown RBP0.93□□□□□ -2.26
SMC1YFL008W GTO3Q04806 366 aa0.93□□□□□ -2.26
SMC1YFL008W SSQ1Q05931 657 aaPredicted RBP0.93□□□□□ -2.26
SMC1YFL008W FAR10Q06001 478 aa0.93□□□□□ -2.26
SMC1YFL008W IRC25Q07951 179 aa0.93□□□□□ -2.26
SMC1YFL008W MED4Q12343 284 aa0.93□□□□□ -2.26
SMC1YFL008W NBL1Q3E7Y6 73 aa0.93□□□□□ -2.26
SMC1YFL008W LAG2Q92325 660 aa0.93□□□□□ -2.26
SMC1YFL008W MRPL25P23369 157 aa0.93□□□□□ -2.26
SMC1YFL008W RPT5P33297 434 aaKnown RBP0.93□□□□□ -2.26
SMC1YFL008W BMH2P34730 273 aaKnown RBP0.93□□□□□ -2.26
SMC1YFL008W RPC25P35718 212 aa0.93□□□□□ -2.26
SMC1YFL008W CAF4P36130 643 aa0.93□□□□□ -2.26
SMC1YFL008W SRL3P36167 246 aa0.93□□□□□ -2.26
SMC1YFL008W TIM17P39515 158 aa0.93□□□□□ -2.26
SMC1YFL008W RMD6P39975 231 aa0.93□□□□□ -2.26
SMC1YFL008W UTP25P40498 721 aaKnown RBP0.93□□□□□ -2.26
SMC1YFL008W ZIM17P42844 174 aa0.93□□□□□ -2.26
SMC1YFL008W SNX4P47057 423 aa0.93□□□□□ -2.26
SMC1YFL008W APS3P47064 194 aa0.93□□□□□ -2.26
SMC1YFL008W TPC1P53257 314 aa0.93□□□□□ -2.26
SMC1YFL008W RTT102P53330 157 aa0.93□□□□□ -2.26
SMC1YFL008W SNZ1Q03148 297 aa0.93□□□□□ -2.26
SMC1YFL008W BET5Q03630 159 aa0.93□□□□□ -2.26
SMC1YFL008W YMR130WQ04223 302 aa0.93□□□□□ -2.26
SMC1YFL008W DBP9Q06218 594 aaKnown RBP0.93□□□□□ -2.26
SMC1YFL008W VAC14Q06708 880 aa0.93□□□□□ -2.26
SMC1YFL008W FEX1Q08913 375 aa0.93□□□□□ -2.26
SMC1YFL008W RTC5Q12108 567 aaKnown RBP0.93□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 69.5 ms