RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C CTM1P38818 585 aa3.75□□□□□ -1.81
LSM6YDR378C PCL7P40186 285 aa3.75□□□□□ -1.81
LSM6YDR378C YGR266WP53326 701 aa3.75□□□□□ -1.81
LSM6YDR378C SNX41Q04053 625 aa3.75□□□□□ -1.81
LSM6YDR378C UTP15Q04305 513 aaKnown RBP3.75□□□□□ -1.81
LSM6YDR378C PIN3Q06449 215 aa3.75□□□□□ -1.81
LSM6YDR378C UTP23Q12339 254 aaKnown RBP3.75□□□□□ -1.81
LSM6YDR378C YIL002W-AQ3E7Z5 69 aa3.75□□□□□ -1.81
LSM6YDR378C YOL085CQ99345 113 aa3.75□□□□□ -1.81
LSM6YDR378C RAD7P06779 565 aa3.74□□□□□ -1.81
LSM6YDR378C RPL5P26321 297 aaKnown RBP3.74□□□□□ -1.81
LSM6YDR378C MRPL40P36534 297 aa3.74□□□□□ -1.81
LSM6YDR378C YMR262WP38430 313 aa3.74□□□□□ -1.81
LSM6YDR378C RRF1P38771 230 aa3.74□□□□□ -1.81
LSM6YDR378C CDC40P40968 455 aaPredicted RBP3.74□□□□□ -1.81
LSM6YDR378C YFL040WP43562 540 aa3.74□□□□□ -1.81
LSM6YDR378C COX16P47081 118 aa3.74□□□□□ -1.81
LSM6YDR378C YGR067CP53243 804 aa3.74□□□□□ -1.81
LSM6YDR378C INP1Q03694 420 aa3.74□□□□□ -1.81
LSM6YDR378C YMR111CQ04461 462 aaPredicted RBP3.74□□□□□ -1.81
LSM6YDR378C YPL245WQ12179 454 aaKnown RBP3.74□□□□□ -1.81
LSM6YDR378C SIA1Q12212 622 aa3.74□□□□□ -1.81
LSM6YDR378C IZH4Q99393 312 aa3.74□□□□□ -1.81
LSM6YDR378C INO2P26798 304 aa3.73□□□□□ -1.81
LSM6YDR378C YKL187CP34231 750 aa3.73□□□□□ -1.81
LSM6YDR378C RPC25P35718 212 aa3.73□□□□□ -1.81
LSM6YDR378C RFT1P38206 574 aaPredicted RBP3.73□□□□□ -1.81
LSM6YDR378C RCK1P38622 512 aa3.73□□□□□ -1.81
LSM6YDR378C DSE1P40077 573 aa3.73□□□□□ -1.81
LSM6YDR378C LOC1P43586 204 aaPredicted RBP3.73□□□□□ -1.81
LSM6YDR378C SDS23P53172 527 aa3.73□□□□□ -1.81
LSM6YDR378C FMP48P53233 369 aa3.73□□□□□ -1.81
LSM6YDR378C INP2Q03824 705 aa3.73□□□□□ -1.81
LSM6YDR378C YDR018CQ12185 396 aa3.73□□□□□ -1.81
LSM6YDR378C AUS1Q08409 1394 aa3.73□□□□□ -1.81
LSM6YDR378C MRPL20P22354 195 aaPredicted RBP3.72□□□□□ -1.81
LSM6YDR378C SWD2P36104 329 aaPredicted RBP3.72□□□□□ -1.81
LSM6YDR378C DBP7P36120 742 aaKnown RBP3.72□□□□□ -1.81
LSM6YDR378C SOP4P39543 234 aaPredicted RBP3.72□□□□□ -1.81
LSM6YDR378C APC4Q04601 652 aa3.72□□□□□ -1.81
LSM6YDR378C MRX8Q05473 314 aa3.72□□□□□ -1.81
LSM6YDR378C YDL012CQ12489 107 aa3.72□□□□□ -1.81
LSM6YDR378C BI3Q9ZZW7 517 aa3.72□□□□□ -1.81
LSM6YDR378C UGA1P17649 471 aa3.71□□□□□ -1.82
LSM6YDR378C CYM1P32898 989 aa3.71□□□□□ -1.82
LSM6YDR378C DED81P38707 554 aaKnown RBP3.71□□□□□ -1.82
LSM6YDR378C PET8P38921 284 aa3.71□□□□□ -1.82
LSM6YDR378C UFE1P41834 346 aa3.71□□□□□ -1.82
LSM6YDR378C MIC19P43594 170 aa3.71□□□□□ -1.82
LSM6YDR378C PNC1P53184 216 aaKnown RBP3.71□□□□□ -1.82
LSM6YDR378C FLO11P08640 1367 aa3.71□□□□□ -1.82
LSM6YDR378C CCH1P50077 2039 aa3.71□□□□□ -1.82
LSM6YDR378C RPL16BP26785 198 aaKnown RBP3.7□□□□□ -1.82
LSM6YDR378C MCH2P36032 473 aa3.7□□□□□ -1.82
LSM6YDR378C YIL054WP40524 105 aa3.7□□□□□ -1.82
LSM6YDR378C SWC4P53201 476 aa3.7□□□□□ -1.82
LSM6YDR378C EGD1Q02642 157 aaKnown RBP3.7□□□□□ -1.82
LSM6YDR378C SPO19Q03029 223 aa3.7□□□□□ -1.82
LSM6YDR378C YMR244WQ04018 355 aa3.7□□□□□ -1.82
LSM6YDR378C YLR413WQ06689 675 aa3.7□□□□□ -1.82
LSM6YDR378C MIM1Q08176 113 aa3.7□□□□□ -1.82
LSM6YDR378C GAL7P08431 366 aa3.69□□□□□ -1.82
LSM6YDR378C FUS3P16892 353 aaKnown RBP3.69□□□□□ -1.82
LSM6YDR378C CKA2P19454 339 aa3.69□□□□□ -1.82
LSM6YDR378C DBP3P20447 523 aaKnown RBP3.69□□□□□ -1.82
LSM6YDR378C ZRT3P34240 503 aa3.69□□□□□ -1.82
LSM6YDR378C KEL2P50090 882 aa3.69□□□□□ -1.82
LSM6YDR378C BIO4P53630 237 aa3.69□□□□□ -1.82
LSM6YDR378C YNR066CP53752 436 aa3.69□□□□□ -1.82
LSM6YDR378C VIK1Q12045 647 aa3.69□□□□□ -1.82
LSM6YDR378C APC9Q12107 265 aa3.69□□□□□ -1.82
LSM6YDR378C RRP42Q12277 265 aaPredicted RBP3.69□□□□□ -1.82
LSM6YDR378C ERP3Q12403 225 aa3.69□□□□□ -1.82
LSM6YDR378C TFC7Q12415 435 aa3.69□□□□□ -1.82
LSM6YDR378C CSM1P25651 190 aa3.68□□□□□ -1.82
LSM6YDR378C TDA11P38854 504 aa3.68□□□□□ -1.82
LSM6YDR378C ERV25P54837 211 aaKnown RBP3.68□□□□□ -1.82
LSM6YDR378C IES4Q08561 116 aa3.68□□□□□ -1.82
LSM6YDR378C LAG2Q92325 660 aa3.68□□□□□ -1.82
LSM6YDR378C TDH3P00359 332 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
LSM6YDR378C RPL31AP0C2H8 113 aaKnown RBP3.67□□□□□ -1.82
LSM6YDR378C GPI12P23797 304 aa3.67□□□□□ -1.82
LSM6YDR378C IFM1P25038 676 aa3.67□□□□□ -1.82
LSM6YDR378C SKG6P32900 734 aaPredicted RBP3.67□□□□□ -1.82
LSM6YDR378C EBP2P36049 427 aaKnown RBP3.67□□□□□ -1.82
LSM6YDR378C RRG9P40156 214 aa3.67□□□□□ -1.82
LSM6YDR378C ECM18Q04623 453 aa3.67□□□□□ -1.82
LSM6YDR378C ERV41Q04651 352 aa3.67□□□□□ -1.82
LSM6YDR378C YLR446WQ06204 433 aa3.67□□□□□ -1.82
LSM6YDR378C BCP1Q06338 283 aa3.67□□□□□ -1.82
LSM6YDR378C MRPL23Q12487 163 aaPredicted RBP3.67□□□□□ -1.82
LSM6YDR378C COX10P21592 462 aa3.66□□□□□ -1.82
LSM6YDR378C RPS0AP32905 252 aaKnown RBP3.66□□□□□ -1.82
LSM6YDR378C YKL063CP35725 167 aa3.66□□□□□ -1.82
LSM6YDR378C FRT2P39734 528 aa3.66□□□□□ -1.82
LSM6YDR378C SLM1P40485 686 aa3.66□□□□□ -1.82
LSM6YDR378C YGL118CP53132 145 aa3.66□□□□□ -1.82
LSM6YDR378C YNL260CP53846 198 aa3.66□□□□□ -1.82
LSM6YDR378C YPL077CQ02831 240 aa3.66□□□□□ -1.82
LSM6YDR378C RNY1Q02933 434 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms