RNA–Protein interactions for RNA: YAR009C

YAR009C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YAR009C, Length 3,591 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YAR009CYAR009C CUE1P38428 203 aa1.07□□□□□ -2.24
YAR009CYAR009C YGP1P38616 354 aaKnown RBP1.07□□□□□ -2.24
YAR009CYAR009C AVT2P39981 480 aa1.07□□□□□ -2.24
YAR009CYAR009C SIM1P40472 476 aa1.07□□□□□ -2.24
YAR009CYAR009C VPS9P54787 451 aa1.07□□□□□ -2.24
YAR009CYAR009C SPR6Q01684 191 aa1.07□□□□□ -2.24
YAR009CYAR009C HAL1Q01766 294 aa1.07□□□□□ -2.24
YAR009CYAR009C YMR102CQ03177 834 aa1.07□□□□□ -2.24
YAR009CYAR009C CDD1Q06549 142 aa1.07□□□□□ -2.24
YAR009CYAR009C CUE5Q08412 411 aaKnown RBP1.07□□□□□ -2.24
YAR009CYAR009C EAF3Q12432 401 aa1.07□□□□□ -2.24
YAR009CYAR009C RPB5P20434 215 aa1.07□□□□□ -2.24
YAR009CYAR009C PPH21P23594 369 aa1.07□□□□□ -2.24
YAR009CYAR009C VPS3P23643 1011 aa1.07□□□□□ -2.24
YAR009CYAR009C PHO91P27514 894 aa1.07□□□□□ -2.24
YAR009CYAR009C PRR1P28708 518 aa1.07□□□□□ -2.24
YAR009CYAR009C YEL073CP39974 107 aa1.07□□□□□ -2.24
YAR009CYAR009C GAB1P41733 394 aa1.07□□□□□ -2.24
YAR009CYAR009C LCB3P47013 409 aa1.07□□□□□ -2.24
YAR009CYAR009C HTZ1Q12692 134 aaKnown RBP1.07□□□□□ -2.24
YAR009CYAR009C YKR104WP0CE69 306 aa1.06□□□□□ -2.24
YAR009CYAR009C PCL1P24867 279 aa1.06□□□□□ -2.24
YAR009CYAR009C YEF1P32622 495 aa1.06□□□□□ -2.24
YAR009CYAR009C SKT5P34226 696 aa1.06□□□□□ -2.24
YAR009CYAR009C MAL32P38158 584 aa1.06□□□□□ -2.24
YAR009CYAR009C MIG3P39943 394 aa1.06□□□□□ -2.24
YAR009CYAR009C ROG1P53118 685 aa1.06□□□□□ -2.24
YAR009CYAR009C PRM6Q04705 352 aa1.06□□□□□ -2.24
YAR009CYAR009C ERP4Q12450 207 aa1.06□□□□□ -2.24
YAR009CYAR009C DDP1Q99321 188 aaKnown RBP1.06□□□□□ -2.24
YAR009CYAR009C VPS1P21576 704 aaKnown RBP1.06□□□□□ -2.24
YAR009CYAR009C NRP1P32770 719 aaKnown RBP RIP-Chip data1.06□□□□□ -2.24not detected
YAR009CYAR009C RTC2P38279 296 aa1.06□□□□□ -2.24
YAR009CYAR009C STP2P38704 541 aa1.06□□□□□ -2.24
YAR009CYAR009C ATM1P40416 690 aa1.06□□□□□ -2.24
YAR009CYAR009C DFG10P40526 253 aa1.06□□□□□ -2.24
YAR009CYAR009C YJL055WP47044 245 aa1.06□□□□□ -2.24
YAR009CYAR009C MST27P53176 234 aa1.06□□□□□ -2.24
YAR009CYAR009C YNL247WP53852 767 aaKnown RBP1.06□□□□□ -2.24
YAR009CYAR009C PET191Q02772 108 aa1.06□□□□□ -2.24
YAR009CYAR009C SMF3Q12078 473 aaPredicted RBP1.06□□□□□ -2.24
YAR009CYAR009C RPN5Q12250 445 aaKnown RBP1.06□□□□□ -2.24
YAR009CYAR009C SPO24Q3E752 67 aa1.06□□□□□ -2.24
YAR009CYAR009C DPH5P32469 300 aaPredicted RBP1.06□□□□□ -2.24
YAR009CYAR009C PEX5P35056 612 aa1.06□□□□□ -2.24
YAR009CYAR009C QDR3P38227 689 aa1.06□□□□□ -2.24
YAR009CYAR009C YHK8P38776 514 aa1.06□□□□□ -2.24
YAR009CYAR009C FRT2P39734 528 aa1.06□□□□□ -2.24
YAR009CYAR009C OXA1P39952 402 aa1.06□□□□□ -2.24
YAR009CYAR009C EDC3P39998 551 aaKnown RBP1.06□□□□□ -2.24
YAR009CYAR009C PAC11P40960 533 aa1.06□□□□□ -2.24
YAR009CYAR009C SNZ3P43545 298 aa1.06□□□□□ -2.24
YAR009CYAR009C CLD1P53264 445 aa1.06□□□□□ -2.24
YAR009CYAR009C CRH1P53301 507 aa1.06□□□□□ -2.24
YAR009CYAR009C SNZ2P53824 298 aa1.06□□□□□ -2.24
YAR009CYAR009C TDA1Q03533 586 aa1.06□□□□□ -2.24
YAR009CYAR009C LIP2Q06005 328 aa1.06□□□□□ -2.24
YAR009CYAR009C ILV1P00927 576 aaKnown RBP1.05□□□□□ -2.24
YAR009CYAR009C PAB1P04147 577 aaKnown RBP RIP-Chip data1.05□□□□□ -2.24not detected
YAR009CYAR009C TPK3P05986 398 aa1.05□□□□□ -2.24
YAR009CYAR009C ARF1P11076 181 aaKnown RBP1.05□□□□□ -2.24
YAR009CYAR009C RAD5P32849 1169 aaPredicted RBP1.05□□□□□ -2.24
YAR009CYAR009C SPT10P35208 640 aa1.05□□□□□ -2.24
YAR009CYAR009C SEO1P39709 593 aa1.05□□□□□ -2.24
YAR009CYAR009C YNL208WP40159 199 aaKnown RBP1.05□□□□□ -2.24
YAR009CYAR009C EGT2P42835 1041 aa1.05□□□□□ -2.24
YAR009CYAR009C GCD14P46959 383 aaPredicted RBP1.05□□□□□ -2.24
YAR009CYAR009C STE24P47154 453 aa1.05□□□□□ -2.24
YAR009CYAR009C NAS6P50086 228 aa1.05□□□□□ -2.24
YAR009CYAR009C SEH1P53011 349 aaKnown RBP1.05□□□□□ -2.24
YAR009CYAR009C TRM112P53738 135 aaPredicted RBP1.05□□□□□ -2.24
YAR009CYAR009C YDR541CQ03049 344 aa1.05□□□□□ -2.24
YAR009CYAR009C PRP3Q03338 469 aaPredicted RBP1.05□□□□□ -2.24
YAR009CYAR009C ADH6Q04894 360 aaKnown RBP1.05□□□□□ -2.24
YAR009CYAR009C IPK1Q06667 281 aa1.05□□□□□ -2.24
YAR009CYAR009C YOP1Q12402 180 aa1.05□□□□□ -2.24
YAR009CYAR009C SOD1P00445 154 aaKnown RBP1.05□□□□□ -2.24
YAR009CYAR009C OPI3P05375 206 aa1.05□□□□□ -2.24
YAR009CYAR009C SSC1P0CS90 654 aaKnown RBP1.05□□□□□ -2.24
YAR009CYAR009C RPL12AP0CX53 165 aaKnown RBP1.05□□□□□ -2.24
YAR009CYAR009C RPL12BP0CX54 165 aa1.05□□□□□ -2.24
YAR009CYAR009C HSP26P15992 214 aaKnown RBP RIP-Chip data1.05□□□□□ -2.24not detected
YAR009CYAR009C YCR102CP25608 368 aa1.05□□□□□ -2.24
YAR009CYAR009C YKL102CP34249 101 aa1.05□□□□□ -2.24
YAR009CYAR009C SWC5P38326 303 aa1.05□□□□□ -2.24
YAR009CYAR009C LRP1P38801 184 aaKnown RBP1.05□□□□□ -2.24
YAR009CYAR009C GDI1P39958 451 aaKnown RBP1.05□□□□□ -2.24
YAR009CYAR009C ICE2P40499 491 aa1.05□□□□□ -2.24
YAR009CYAR009C COS1P53822 381 aa1.05□□□□□ -2.24
YAR009CYAR009C TSA2Q04120 196 aa1.05□□□□□ -2.24
YAR009CYAR009C NDL1Q06568 189 aa1.05□□□□□ -2.24
YAR009CYAR009C RNH203Q12338 110 aa1.05□□□□□ -2.24
YAR009CYAR009C YCR024C-BQ3E7Z8 88 aa1.05□□□□□ -2.24
YAR009CYAR009C PRY2P36110 329 aa1.04□□□□□ -2.24
YAR009CYAR009C ECM8P38246 354 aa1.04□□□□□ -2.24
YAR009CYAR009C DED81P38707 554 aaKnown RBP1.04□□□□□ -2.24
YAR009CYAR009C EFM4P40516 257 aa1.04□□□□□ -2.24
YAR009CYAR009C ATG18P43601 500 aa1.04□□□□□ -2.24
YAR009CYAR009C CPR7P47103 393 aa1.04□□□□□ -2.24
YAR009CYAR009C BNS1P50084 137 aa1.04□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 72.5 ms