RNA–Protein interactions for RNA: YAL002W

VPS8, Transcript of Membrane-binding component of the CORVET complex, yeastyeast

Gene VPS8, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS8YAL002W HOC1P47124 396 aa1.86□□□□□ -2.11
VPS8YAL002W CWC23P52868 283 aaPredicted RBP1.86□□□□□ -2.11
VPS8YAL002W TDA7P53882 636 aaPredicted RBP1.86□□□□□ -2.11
VPS8YAL002W SWF1Q04629 336 aa1.86□□□□□ -2.11
VPS8YAL002W IMA2Q08295 589 aa1.86□□□□□ -2.11
VPS8YAL002W ALE1Q08548 619 aa1.86□□□□□ -2.11
VPS8YAL002W PNS1Q12412 539 aa1.86□□□□□ -2.11
VPS8YAL002W TEL1P38110 2787 aa1.85□□□□□ -2.11
VPS8YAL002W REV1P12689 985 aa1.85□□□□□ -2.11
VPS8YAL002W SSO1P32867 290 aa1.85□□□□□ -2.11
VPS8YAL002W SKN1P33336 771 aa1.85□□□□□ -2.11
VPS8YAL002W AST1P35183 429 aa1.85□□□□□ -2.11
VPS8YAL002W TAF14P35189 244 aa1.85□□□□□ -2.11
VPS8YAL002W ARN1P38731 627 aa1.85□□□□□ -2.11
VPS8YAL002W HAT2P39984 401 aa1.85□□□□□ -2.11
VPS8YAL002W DDI1P40087 428 aa1.85□□□□□ -2.11
VPS8YAL002W LSM1P47017 172 aaKnown RBP1.85□□□□□ -2.11
VPS8YAL002W NAT4Q04751 285 aa1.85□□□□□ -2.11
VPS8YAL002W ASA1Q06822 443 aa1.85□□□□□ -2.11
VPS8YAL002W YRA1Q12159 226 aaKnown RBP1.85□□□□□ -2.11
VPS8YAL002W YCL012CQ8J0M4 134 aa1.85□□□□□ -2.11
VPS8YAL002W TPK3P05986 398 aa1.85□□□□□ -2.11
VPS8YAL002W ATP1P07251 545 aaKnown RBP1.85□□□□□ -2.11
VPS8YAL002W MRP1P10662 321 aaKnown RBP1.85□□□□□ -2.11
VPS8YAL002W YPT52P36018 234 aaKnown RBP1.85□□□□□ -2.11
VPS8YAL002W CBT1P36038 271 aaPredicted RBP1.85□□□□□ -2.11
VPS8YAL002W VPS52P39904 641 aa1.85□□□□□ -2.11
VPS8YAL002W FAU1P40099 211 aa1.85□□□□□ -2.11
VPS8YAL002W YJR141WP47172 347 aaPredicted RBP1.85□□□□□ -2.11
VPS8YAL002W NAS6P50086 228 aa1.85□□□□□ -2.11
VPS8YAL002W SEH1P53011 349 aaKnown RBP1.85□□□□□ -2.11
VPS8YAL002W MIG2P53035 382 aa1.85□□□□□ -2.11
VPS8YAL002W NOP19P53317 196 aaPredicted RBP1.85□□□□□ -2.11
VPS8YAL002W TRM44Q02648 567 aaKnown RBP1.85□□□□□ -2.11
VPS8YAL002W EBS1Q03466 884 aaKnown RBP1.85□□□□□ -2.11
VPS8YAL002W FAR8Q05040 523 aa1.85□□□□□ -2.11
VPS8YAL002W SKI7Q08491 747 aaPredicted RBP1.85□□□□□ -2.11
VPS8YAL002W SAM4Q08985 325 aaKnown RBP1.85□□□□□ -2.11
VPS8YAL002W MEX67Q99257 599 aaKnown RBP1.85□□□□□ -2.11
VPS8YAL002W FBA1P14540 359 aaKnown RBP1.85□□□□□ -2.11
VPS8YAL002W ARF2P19146 181 aaKnown RBP1.85□□□□□ -2.11
VPS8YAL002W FAR1P21268 830 aa1.85□□□□□ -2.11
VPS8YAL002W OAR1P35731 278 aa1.85□□□□□ -2.11
VPS8YAL002W MYO3P36006 1272 aa1.85□□□□□ -2.11
VPS8YAL002W FLO10P36170 1169 aa1.85□□□□□ -2.11
VPS8YAL002W DTR1P38125 572 aa1.85□□□□□ -2.11
VPS8YAL002W ATG7P38862 630 aa1.85□□□□□ -2.11
VPS8YAL002W COX15P40086 486 aa1.85□□□□□ -2.11
VPS8YAL002W SLM1P40485 686 aa1.85□□□□□ -2.11
VPS8YAL002W IRC24P40580 263 aa1.85□□□□□ -2.11
VPS8YAL002W SNO3P43544 222 aa1.85□□□□□ -2.11
VPS8YAL002W SNZ3P43545 298 aa1.85□□□□□ -2.11
VPS8YAL002W RTT101P47050 842 aa1.85□□□□□ -2.11
VPS8YAL002W SSN8P47821 323 aa1.85□□□□□ -2.11
VPS8YAL002W SNZ2P53824 298 aa1.85□□□□□ -2.11
VPS8YAL002W MTQ1P53944 314 aa1.85□□□□□ -2.11
VPS8YAL002W DIG1Q03063 452 aaKnown RBP1.85□□□□□ -2.11
VPS8YAL002W YMR034CQ05131 434 aaPredicted RBP1.85□□□□□ -2.11
VPS8YAL002W NDE2Q07500 545 aa1.85□□□□□ -2.11
VPS8YAL002W SGT1Q08446 395 aa1.85□□□□□ -2.11
VPS8YAL002W SLM3Q12093 417 aa1.85□□□□□ -2.11
VPS8YAL002W APC9Q12107 265 aa1.85□□□□□ -2.11
VPS8YAL002W MSL5Q12186 476 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
VPS8YAL002W ACC1Q00955 2233 aaKnown RBP1.85□□□□□ -2.11
VPS8YAL002W HKR1P41809 1802 aa1.84□□□□□ -2.11
VPS8YAL002W CBF1P17106 351 aa1.84□□□□□ -2.11
VPS8YAL002W YMR31P19955 123 aa1.84□□□□□ -2.11
VPS8YAL002W MEI4P29467 408 aa1.84□□□□□ -2.11
VPS8YAL002W SPS19P32573 292 aaKnown RBP1.84□□□□□ -2.11
VPS8YAL002W FRE2P36033 711 aa1.84□□□□□ -2.11
VPS8YAL002W IST2P38250 946 aa1.84□□□□□ -2.11
VPS8YAL002W MIC12P38341 106 aa1.84□□□□□ -2.11
VPS8YAL002W PRS2P38620 318 aaKnown RBP1.84□□□□□ -2.11
VPS8YAL002W RCK2P38623 610 aa1.84□□□□□ -2.11
VPS8YAL002W POG1P40473 351 aa1.84□□□□□ -2.11
VPS8YAL002W YFL040WP43562 540 aa1.84□□□□□ -2.11
VPS8YAL002W ASI1P54074 624 aa1.84□□□□□ -2.11
VPS8YAL002W RHO4Q00246 291 aa1.84□□□□□ -2.11
VPS8YAL002W STP1Q00947 519 aa1.84□□□□□ -2.11
VPS8YAL002W CTF19Q02732 369 aa1.84□□□□□ -2.11
VPS8YAL002W YPL077CQ02831 240 aa1.84□□□□□ -2.11
VPS8YAL002W ASR1Q06834 288 aa1.84□□□□□ -2.11
VPS8YAL002W DAP1Q12091 152 aa1.84□□□□□ -2.11
VPS8YAL002W SNF8Q12483 233 aa1.84□□□□□ -2.11
VPS8YAL002W HTB1P02293 131 aaKnown RBP1.84□□□□□ -2.11
VPS8YAL002W HTB2P02294 131 aa1.84□□□□□ -2.11
VPS8YAL002W RPS24AP0CX31 135 aaKnown RBP1.84□□□□□ -2.11
VPS8YAL002W RPS24BP0CX32 135 aaKnown RBP1.84□□□□□ -2.11
VPS8YAL002W EXO70P19658 623 aa1.84□□□□□ -2.11
VPS8YAL002W RNA15P25299 296 aaPredicted RBP1.84□□□□□ -2.11
VPS8YAL002W POP5P28005 173 aa1.84□□□□□ -2.11
VPS8YAL002W SNC1P31109 117 aa1.84□□□□□ -2.11
VPS8YAL002W UTR4P32626 227 aa1.84□□□□□ -2.11
VPS8YAL002W TMT1P32643 299 aa1.84□□□□□ -2.11
VPS8YAL002W NUF2P33895 451 aa1.84□□□□□ -2.11
VPS8YAL002W PRX1P34227 261 aaKnown RBP1.84□□□□□ -2.11
VPS8YAL002W PHO90P39535 881 aa1.84□□□□□ -2.11
VPS8YAL002W SOP4P39543 234 aaPredicted RBP1.84□□□□□ -2.11
VPS8YAL002W YIL024CP40543 189 aa1.84□□□□□ -2.11
VPS8YAL002W NCA3P46955 337 aa1.84□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms