RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C ERD1P16151 362 aa0.97□□□□□ -2.25
NIP100YPL174C RBK1P25332 333 aa0.97□□□□□ -2.25
NIP100YPL174C VAM7P32912 316 aa0.97□□□□□ -2.25
NIP100YPL174C TKL2P33315 681 aa0.97□□□□□ -2.25
NIP100YPL174C YNL146WP53906 100 aa0.97□□□□□ -2.25
NIP100YPL174C EOS1P53938 366 aa0.97□□□□□ -2.25
NIP100YPL174C SMD1Q02260 146 aaPredicted RBP0.97□□□□□ -2.25
NIP100YPL174C YPL113CQ02961 396 aa0.97□□□□□ -2.25
NIP100YPL174C YPR063CQ12160 140 aa0.97□□□□□ -2.25
NIP100YPL174C TFC7Q12415 435 aa0.97□□□□□ -2.25
NIP100YPL174C YOL085CQ99345 113 aa0.97□□□□□ -2.25
NIP100YPL174C MET2P08465 486 aa0.96□□□□□ -2.26
NIP100YPL174C DAL5P15365 543 aa0.96□□□□□ -2.26
NIP100YPL174C MEI5P32489 222 aa0.96□□□□□ -2.26
NIP100YPL174C ATG7P38862 630 aa0.96□□□□□ -2.26
NIP100YPL174C MIC19P43594 170 aa0.96□□□□□ -2.26
NIP100YPL174C LSG1P53145 640 aaKnown RBP0.96□□□□□ -2.26
NIP100YPL174C NAT4Q04751 285 aa0.96□□□□□ -2.26
NIP100YPL174C BUR2Q05949 395 aa0.96□□□□□ -2.26
NIP100YPL174C SPS100P13130 326 aa0.96□□□□□ -2.26
NIP100YPL174C CKI1P20485 582 aa0.96□□□□□ -2.26
NIP100YPL174C MLC1P53141 149 aa0.96□□□□□ -2.26
NIP100YPL174C SUR7P54003 302 aa0.96□□□□□ -2.26
NIP100YPL174C RPN8Q08723 338 aaKnown RBP0.96□□□□□ -2.26
NIP100YPL174C MRX4Q12467 430 aa0.96□□□□□ -2.26
NIP100YPL174C HPR1P17629 752 aaKnown RBP0.95□□□□□ -2.26
NIP100YPL174C VPS1P21576 704 aaKnown RBP0.95□□□□□ -2.26
NIP100YPL174C CIN8P27895 1000 aa0.95□□□□□ -2.26
NIP100YPL174C SPO73P40031 143 aa0.95□□□□□ -2.26
NIP100YPL174C JEM1P40358 645 aa0.95□□□□□ -2.26
NIP100YPL174C YGL088WP53151 121 aa0.95□□□□□ -2.26
NIP100YPL174C RGM1Q00453 211 aa0.95□□□□□ -2.26
NIP100YPL174C NOP6Q07623 225 aaKnown RBP0.95□□□□□ -2.26
NIP100YPL174C DTD1Q07648 150 aaKnown RBP0.95□□□□□ -2.26
NIP100YPL174C PRP46Q12417 451 aaPredicted RBP0.95□□□□□ -2.26
NIP100YPL174C THR4P16120 514 aaKnown RBP0.95□□□□□ -2.26
NIP100YPL174C INO2P26798 304 aa0.95□□□□□ -2.26
NIP100YPL174C MIG1P27705 504 aa0.95□□□□□ -2.26
NIP100YPL174C MKK1P32490 508 aa0.95□□□□□ -2.26
NIP100YPL174C CYM1P32898 989 aa0.95□□□□□ -2.26
NIP100YPL174C CSE1P33307 960 aa0.95□□□□□ -2.26
NIP100YPL174C IML3P38265 245 aa0.95□□□□□ -2.26
NIP100YPL174C PES4P39684 611 aa0.95□□□□□ -2.26
NIP100YPL174C SLM1P40485 686 aa0.95□□□□□ -2.26
NIP100YPL174C RPA34P47006 233 aaPredicted RBP0.95□□□□□ -2.26
NIP100YPL174C EFM3P47163 339 aa0.95□□□□□ -2.26
NIP100YPL174C CSM3Q04659 317 aa0.95□□□□□ -2.26
NIP100YPL174C ARC18Q05933 178 aaKnown RBP0.95□□□□□ -2.26
NIP100YPL174C SLM3Q12093 417 aa0.95□□□□□ -2.26
NIP100YPL174C DFM1Q12743 341 aaKnown RBP0.95□□□□□ -2.26
NIP100YPL174C MYO3P36006 1272 aa0.94□□□□□ -2.26
NIP100YPL174C SCC4P40090 624 aa0.94□□□□□ -2.26
NIP100YPL174C YGR016WP53209 190 aa0.94□□□□□ -2.26
NIP100YPL174C ALK2P32789 676 aaPredicted RBP0.94□□□□□ -2.26
NIP100YPL174C MRPS5P33759 307 aa0.94□□□□□ -2.26
NIP100YPL174C EDC2P40023 145 aaPredicted RBP0.94□□□□□ -2.26
NIP100YPL174C YHC3P47040 408 aa0.94□□□□□ -2.26
NIP100YPL174C VIK1Q12045 647 aa0.94□□□□□ -2.26
NIP100YPL174C CBP2P03874 630 aaPredicted RBP0.93□□□□□ -2.26
NIP100YPL174C FAR1P21268 830 aa0.93□□□□□ -2.26
NIP100YPL174C UBA1P22515 1024 aaKnown RBP0.93□□□□□ -2.26
NIP100YPL174C MXR2P25566 168 aa0.93□□□□□ -2.26
NIP100YPL174C IST2P38250 946 aa0.93□□□□□ -2.26
NIP100YPL174C ATG12P38316 186 aa0.93□□□□□ -2.26
NIP100YPL174C ASP1P38986 381 aaPredicted RBP0.93□□□□□ -2.26
NIP100YPL174C YDR018CQ12185 396 aa0.93□□□□□ -2.26
NIP100YPL174C YOR012WQ12351 137 aa0.93□□□□□ -2.26
NIP100YPL174C CBF5P33322 483 aaKnown RBP RIP-Chip data0.93□□□□□ -2.26not detected
NIP100YPL174C YBL081WP38180 368 aaKnown RBP0.93□□□□□ -2.26
NIP100YPL174C ALP1P38971 573 aa0.93□□□□□ -2.26
NIP100YPL174C YIL012WP40551 113 aa0.93□□□□□ -2.26
NIP100YPL174C YGL114WP53134 725 aa0.93□□□□□ -2.26
NIP100YPL174C YNR068CP53754 272 aa0.93□□□□□ -2.26
NIP100YPL174C ERP4Q12450 207 aa0.93□□□□□ -2.26
NIP100YPL174C FRE6Q12473 712 aa0.93□□□□□ -2.26
NIP100YPL174C SPO24Q3E752 67 aa0.93□□□□□ -2.26
NIP100YPL174C SUR1P33300 382 aa0.92□□□□□ -2.26
NIP100YPL174C MED8P38304 223 aa0.92□□□□□ -2.26
NIP100YPL174C LCP5P40079 357 aaPredicted RBP0.92□□□□□ -2.26
NIP100YPL174C YER188WP40103 239 aa0.92□□□□□ -2.26
NIP100YPL174C AQR1P53943 586 aa0.92□□□□□ -2.26
NIP100YPL174C YPR078CQ06813 372 aa0.92□□□□□ -2.26
NIP100YPL174C TAF10Q12030 206 aa0.92□□□□□ -2.26
NIP100YPL174C HXT2P23585 541 aa0.92□□□□□ -2.26
NIP100YPL174C GRR1P24814 1151 aa0.92□□□□□ -2.26
NIP100YPL174C ERG9P29704 444 aa0.92□□□□□ -2.26
NIP100YPL174C MRPL6P32904 214 aa0.92□□□□□ -2.26
NIP100YPL174C DAD2P36162 133 aa0.92□□□□□ -2.26
NIP100YPL174C RXT2P38255 430 aa0.92□□□□□ -2.26
NIP100YPL174C LRP1P38801 184 aaKnown RBP0.92□□□□□ -2.26
NIP100YPL174C PRP39P39682 629 aaKnown RBP0.92□□□□□ -2.26
NIP100YPL174C DSE1P40077 573 aa0.92□□□□□ -2.26
NIP100YPL174C SPH1Q06160 661 aa0.92□□□□□ -2.26
NIP100YPL174C STE3P06783 470 aa0.91□□□□□ -2.26
NIP100YPL174C YSW1P38280 609 aa0.91□□□□□ -2.26
NIP100YPL174C DXO1Q06349 442 aa0.91□□□□□ -2.26
NIP100YPL174C MRX9Q07349 420 aaKnown RBP0.91□□□□□ -2.26
NIP100YPL174C CLP1Q08685 445 aaPredicted RBP0.91□□□□□ -2.26
NIP100YPL174C SNF6P18888 332 aa0.91□□□□□ -2.26
NIP100YPL174C UTR1P21373 530 aa0.91□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms