RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C UTP25P40498 721 aaKnown RBP0.77□□□□□ -2.29
RKR1YMR247C UFE1P41834 346 aa0.77□□□□□ -2.29
RKR1YMR247C MOB2P43563 287 aa0.77□□□□□ -2.29
RKR1YMR247C EPL1P43572 832 aa0.77□□□□□ -2.29
RKR1YMR247C PMT4P46971 762 aa0.77□□□□□ -2.29
RKR1YMR247C LYS4P49367 693 aaPredicted RBP0.77□□□□□ -2.29
RKR1YMR247C ROG1P53118 685 aa0.77□□□□□ -2.29
RKR1YMR247C DRN1P53255 507 aaKnown RBP0.77□□□□□ -2.29
RKR1YMR247C OKP1P53298 406 aa0.77□□□□□ -2.29
RKR1YMR247C DID2P69771 204 aa0.77□□□□□ -2.29
RKR1YMR247C DIG1Q03063 452 aaKnown RBP0.77□□□□□ -2.29
RKR1YMR247C YDR114CQ04597 100 aa0.77□□□□□ -2.29
RKR1YMR247C COQ9Q05779 260 aa0.77□□□□□ -2.29
RKR1YMR247C SPO77Q06134 477 aa0.77□□□□□ -2.29
RKR1YMR247C DDC1Q08949 612 aa0.77□□□□□ -2.29
RKR1YMR247C VPS54Q12071 889 aa0.77□□□□□ -2.29
RKR1YMR247C YER145C-AA0A023PYF4 145 aa0.76□□□□□ -2.29
RKR1YMR247C TRP1P00912 224 aa0.76□□□□□ -2.29
RKR1YMR247C RRT12P25381 491 aa0.76□□□□□ -2.29
RKR1YMR247C RIM1P32445 135 aaKnown RBP0.76□□□□□ -2.29
RKR1YMR247C ATG12P38316 186 aa0.76□□□□□ -2.29
RKR1YMR247C ATG18P43601 500 aa0.76□□□□□ -2.29
RKR1YMR247C GCD14P46959 383 aaPredicted RBP0.76□□□□□ -2.29
RKR1YMR247C YJR141WP47172 347 aaPredicted RBP0.76□□□□□ -2.29
RKR1YMR247C TAF6P53040 516 aa0.76□□□□□ -2.29
RKR1YMR247C SDS23P53172 527 aa0.76□□□□□ -2.29
RKR1YMR247C YIF1P53845 314 aaKnown RBP0.76□□□□□ -2.29
RKR1YMR247C PRP38Q00723 242 aaPredicted RBP0.76□□□□□ -2.29
RKR1YMR247C SPR6Q01684 191 aa0.76□□□□□ -2.29
RKR1YMR247C HAL1Q01766 294 aa0.76□□□□□ -2.29
RKR1YMR247C EGD1Q02642 157 aaKnown RBP0.76□□□□□ -2.29
RKR1YMR247C CCE1Q03702 353 aa0.76□□□□□ -2.29
RKR1YMR247C YMR310CQ04867 317 aaPredicted RBP0.76□□□□□ -2.29
RKR1YMR247C FAR10Q06001 478 aa0.76□□□□□ -2.29
RKR1YMR247C RLP24Q07915 199 aaKnown RBP0.76□□□□□ -2.29
RKR1YMR247C SPE3Q12074 293 aaKnown RBP0.76□□□□□ -2.29
RKR1YMR247C SCC2Q04002 1493 aa0.76□□□□□ -2.29
RKR1YMR247C TAF2P23255 1407 aa0.76□□□□□ -2.29
RKR1YMR247C SOD1P00445 154 aaKnown RBP0.76□□□□□ -2.29
RKR1YMR247C RPL1AP0CX43 217 aaKnown RBP0.76□□□□□ -2.29
RKR1YMR247C RPL1BP0CX44 217 aaKnown RBP0.76□□□□□ -2.29
RKR1YMR247C MIR1P23641 311 aaKnown RBP0.76□□□□□ -2.29
RKR1YMR247C GRR1P24814 1151 aa0.76□□□□□ -2.29
RKR1YMR247C DAL80P26343 269 aa0.76□□□□□ -2.29
RKR1YMR247C MSP1P28737 362 aa0.76□□□□□ -2.29
RKR1YMR247C SRB2P34162 210 aa0.76□□□□□ -2.29
RKR1YMR247C MSG5P38590 489 aa0.76□□□□□ -2.29
RKR1YMR247C GEP4P38812 185 aa0.76□□□□□ -2.29
RKR1YMR247C TDA11P38854 504 aa0.76□□□□□ -2.29
RKR1YMR247C TIM17P39515 158 aa0.76□□□□□ -2.29
RKR1YMR247C PTI1P39927 425 aaPredicted RBP0.76□□□□□ -2.29
RKR1YMR247C SCC4P40090 624 aa0.76□□□□□ -2.29
RKR1YMR247C TIF34P40217 347 aaKnown RBP0.76□□□□□ -2.29
RKR1YMR247C YFL064CP43540 174 aa0.76□□□□□ -2.29
RKR1YMR247C MRX5P47007 382 aa0.76□□□□□ -2.29
RKR1YMR247C YGR015CP53208 328 aa0.76□□□□□ -2.29
RKR1YMR247C RRN9P53437 365 aa0.76□□□□□ -2.29
RKR1YMR247C HCH1P53834 153 aa0.76□□□□□ -2.29
RKR1YMR247C HXT11P54862 567 aa0.76□□□□□ -2.29
RKR1YMR247C YPL077CQ02831 240 aa0.76□□□□□ -2.29
RKR1YMR247C SVL3Q03088 825 aaKnown RBP0.76□□□□□ -2.29
RKR1YMR247C ERB1Q04660 807 aaKnown RBP0.76□□□□□ -2.29
RKR1YMR247C YPR078CQ06813 372 aa0.76□□□□□ -2.29
RKR1YMR247C YDL144CQ07589 356 aa0.76□□□□□ -2.29
RKR1YMR247C TMS1Q12116 473 aa0.76□□□□□ -2.29
RKR1YMR247C FCY22Q12119 530 aa0.76□□□□□ -2.29
RKR1YMR247C YPR022CQ12139 1133 aa0.76□□□□□ -2.29
RKR1YMR247C YDR262WQ12331 272 aa0.76□□□□□ -2.29
RKR1YMR247C AHC1Q12433 566 aa0.76□□□□□ -2.29
RKR1YMR247C SSN2P38931 1420 aa0.76□□□□□ -2.29
RKR1YMR247C SPT3P06844 337 aa0.76□□□□□ -2.29
RKR1YMR247C RPL3P14126 387 aaKnown RBP0.76□□□□□ -2.29
RKR1YMR247C TAL1P15019 335 aaKnown RBP0.76□□□□□ -2.29
RKR1YMR247C SAM2P19358 384 aaKnown RBP0.76□□□□□ -2.29
RKR1YMR247C TRX1P22217 103 aaKnown RBP0.76□□□□□ -2.29
RKR1YMR247C RPL5P26321 297 aaKnown RBP0.76□□□□□ -2.29
RKR1YMR247C RPS0AP32905 252 aaKnown RBP0.76□□□□□ -2.29
RKR1YMR247C AST1P35183 429 aa0.76□□□□□ -2.29
RKR1YMR247C BTT1P40314 149 aaPredicted RBP0.76□□□□□ -2.29
RKR1YMR247C DSN1P40568 576 aa0.76□□□□□ -2.29
RKR1YMR247C CDC40P40968 455 aaPredicted RBP0.76□□□□□ -2.29
RKR1YMR247C YNL320WP42840 284 aa0.76□□□□□ -2.29
RKR1YMR247C IGD1P43598 195 aa0.76□□□□□ -2.29
RKR1YMR247C NGL3Q03210 505 aa0.76□□□□□ -2.29
RKR1YMR247C YMR279CQ03263 540 aa0.76□□□□□ -2.29
RKR1YMR247C MZM1Q03429 123 aaPredicted RBP0.76□□□□□ -2.29
RKR1YMR247C PEX30Q06169 523 aa0.76□□□□□ -2.29
RKR1YMR247C GPN3Q06543 272 aa0.76□□□□□ -2.29
RKR1YMR247C MRX9Q07349 420 aaKnown RBP0.76□□□□□ -2.29
RKR1YMR247C SOR2Q07786 357 aa0.76□□□□□ -2.29
RKR1YMR247C SMT3Q12306 101 aaKnown RBP0.76□□□□□ -2.29
RKR1YMR247C YDL199CQ12407 687 aa0.76□□□□□ -2.29
RKR1YMR247C ERP4Q12450 207 aa0.76□□□□□ -2.29
RKR1YMR247C PAN1P32521 1480 aa0.76□□□□□ -2.29
RKR1YMR247C PMD1P32634 1753 aa0.76□□□□□ -2.29
RKR1YMR247C ADE6P38972 1358 aaKnown RBP0.76□□□□□ -2.29
RKR1YMR247C CAP2P13517 287 aa0.76□□□□□ -2.29
RKR1YMR247C CCA1P21269 546 aa0.76□□□□□ -2.29
RKR1YMR247C UBA1P22515 1024 aaKnown RBP0.76□□□□□ -2.29
RKR1YMR247C YSR3P23501 404 aa0.76□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms