RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C PNS1Q12412 539 aa9.44□□□□□ -0.9
SHM2YLR058C NDC1P32500 655 aa9.43□□□□□ -0.9
SHM2YLR058C TRS65P32893 560 aa9.43□□□□□ -0.9
SHM2YLR058C SLC1P33333 303 aa9.43□□□□□ -0.9
SHM2YLR058C YKL071WP36086 256 aa9.43□□□□□ -0.9
SHM2YLR058C MRPL16P38064 232 aa9.43□□□□□ -0.9
SHM2YLR058C MDM31P38880 579 aa9.43□□□□□ -0.9
SHM2YLR058C NAB3P38996 802 aaKnown RBP RIP-Chip data9.43□□□□□ -0.9not detected
SHM2YLR058C IRC7P43623 340 aa9.43□□□□□ -0.9
SHM2YLR058C PGU1P47180 361 aa9.43□□□□□ -0.9
SHM2YLR058C BUD17P53727 317 aa9.43□□□□□ -0.9
SHM2YLR058C TFB3Q03290 321 aa9.43□□□□□ -0.9
SHM2YLR058C YDR249CQ03787 373 aa9.43□□□□□ -0.9
SHM2YLR058C HDA2Q06629 674 aa9.43□□□□□ -0.9
SHM2YLR058C YLR040CQ07988 224 aa9.43□□□□□ -0.9
SHM2YLR058C RDR1Q08904 546 aa9.43□□□□□ -0.9
SHM2YLR058C YPL191CQ08930 360 aa9.43□□□□□ -0.9
SHM2YLR058C RLM1Q12224 676 aa9.43□□□□□ -0.9
SHM2YLR058C RPS5P26783 225 aaKnown RBP9.42□□□□□ -0.9
SHM2YLR058C YEF1P32622 495 aa9.42□□□□□ -0.9
SHM2YLR058C NIC96P34077 839 aa9.42□□□□□ -0.9
SHM2YLR058C TPO5P36029 618 aa9.42□□□□□ -0.9
SHM2YLR058C YKR015CP36111 568 aa9.42□□□□□ -0.9
SHM2YLR058C BAP2P38084 609 aa9.42□□□□□ -0.9
SHM2YLR058C YJR098CP47139 656 aa9.42□□□□□ -0.9
SHM2YLR058C ECL1P48235 211 aa9.42□□□□□ -0.9
SHM2YLR058C VPS73P53142 486 aaKnown RBP9.42□□□□□ -0.9
SHM2YLR058C NQM1P53228 333 aaPredicted RBP9.42□□□□□ -0.9
SHM2YLR058C MPP6P53725 186 aaPredicted RBP9.42□□□□□ -0.9
SHM2YLR058C PGA1P53896 198 aa9.42□□□□□ -0.9
SHM2YLR058C NUP49Q02199 472 aa9.42□□□□□ -0.9
SHM2YLR058C FIN1Q03898 291 aa9.42□□□□□ -0.9
SHM2YLR058C YMR087WQ04299 284 aa9.42□□□□□ -0.9
SHM2YLR058C RSA3Q05942 220 aaKnown RBP9.42□□□□□ -0.9
SHM2YLR058C COQ10Q08058 207 aa9.42□□□□□ -0.9
SHM2YLR058C YOL024WQ08172 172 aa9.42□□□□□ -0.9
SHM2YLR058C NTG2Q08214 380 aa9.42□□□□□ -0.9
SHM2YLR058C YOR289WQ12012 251 aaPredicted RBP9.42□□□□□ -0.9
SHM2YLR058C MSL5Q12186 476 aaKnown RBP RIP-Chip data9.42□□□□□ -0.9not detected
SHM2YLR058C HER1Q12276 1246 aa9.42□□□□□ -0.9
SHM2YLR058C RPB8P20436 146 aa9.41□□□□□ -0.9
SHM2YLR058C NUP1P20676 1076 aa9.41□□□□□ -0.9
SHM2YLR058C ERG8P24521 451 aa9.41□□□□□ -0.9
SHM2YLR058C EHD3P28817 500 aa9.41□□□□□ -0.9
SHM2YLR058C HIS7P33734 552 aaKnown RBP9.41□□□□□ -0.9
SHM2YLR058C YKR073CP36153 106 aa9.41□□□□□ -0.9
SHM2YLR058C YHR035WP38769 630 aa9.41□□□□□ -0.9
SHM2YLR058C AIM10P39965 576 aaKnown RBP9.41□□□□□ -0.9
SHM2YLR058C ECO1P43605 281 aa9.41□□□□□ -0.9
SHM2YLR058C COS10P52924 374 aa9.41□□□□□ -0.9
SHM2YLR058C COX20Q04935 205 aa9.41□□□□□ -0.9
SHM2YLR058C MLC2Q06580 163 aa9.41□□□□□ -0.9
SHM2YLR058C HNT3Q08702 217 aa9.41□□□□□ -0.9
SHM2YLR058C YRM1Q12340 786 aa9.41□□□□□ -0.9
SHM2YLR058C SWM1Q12379 170 aa9.41□□□□□ -0.9
SHM2YLR058C YHR214C-DP0CX93 97 aa9.4□□□□□ -0.9
SHM2YLR058C TAL1P15019 335 aaKnown RBP9.4□□□□□ -0.9
SHM2YLR058C PHO80P20052 293 aa9.4□□□□□ -0.9
SHM2YLR058C NUD1P32336 851 aa9.4□□□□□ -0.9
SHM2YLR058C MSN4P33749 630 aa9.4□□□□□ -0.9
SHM2YLR058C KAE1P36132 386 aa9.4□□□□□ -0.9
SHM2YLR058C RIX1P38883 763 aaPredicted RBP9.4□□□□□ -0.9
SHM2YLR058C FET3P38993 636 aa9.4□□□□□ -0.9
SHM2YLR058C YER010CP40011 234 aa9.4□□□□□ -0.9
SHM2YLR058C NTA1P40354 457 aa9.4□□□□□ -0.9
SHM2YLR058C HOL1P53389 586 aa9.4□□□□□ -0.9
SHM2YLR058C RRN9P53437 365 aa9.4□□□□□ -0.9
SHM2YLR058C PRP3Q03338 469 aaPredicted RBP9.4□□□□□ -0.9
SHM2YLR058C MRPL1Q04599 285 aa9.4□□□□□ -0.9
SHM2YLR058C UTP21Q06078 939 aaPredicted RBP9.4□□□□□ -0.9
SHM2YLR058C HRT1Q08273 121 aa9.4□□□□□ -0.9
SHM2YLR058C PCL9Q12477 304 aa9.4□□□□□ -0.9
SHM2YLR058C SET6Q12529 373 aa9.4□□□□□ -0.9
SHM2YLR058C CYT1P07143 309 aa9.39□□□□□ -0.91
SHM2YLR058C AIM17P23180 465 aaKnown RBP9.39□□□□□ -0.91
SHM2YLR058C SCO1P23833 295 aa9.39□□□□□ -0.91
SHM2YLR058C MDH3P32419 343 aaKnown RBP RIP-Chip data9.39□□□□□ -0.91not detected
SHM2YLR058C SSY5P47002 699 aa9.39□□□□□ -0.91
SHM2YLR058C EFM3P47163 339 aa9.39□□□□□ -0.91
SHM2YLR058C RBL2P48606 106 aaKnown RBP9.39□□□□□ -0.91
SHM2YLR058C MNT4P53745 580 aa9.39□□□□□ -0.91
SHM2YLR058C ATG4P53867 494 aa9.39□□□□□ -0.91
SHM2YLR058C SPC19Q03954 165 aa9.39□□□□□ -0.91
SHM2YLR058C MIX14Q04341 121 aa9.39□□□□□ -0.91
SHM2YLR058C MRX10Q05648 414 aa9.39□□□□□ -0.91
SHM2YLR058C YPR109WQ06104 294 aa9.39□□□□□ -0.91
SHM2YLR058C NEJ1Q06148 342 aa9.39□□□□□ -0.91
SHM2YLR058C RBD2Q12270 262 aa9.39□□□□□ -0.91
SHM2YLR058C YOR343CQ12484 108 aa9.39□□□□□ -0.91
SHM2YLR058C YGR161W-CQ3E744 92 aa9.39□□□□□ -0.91
SHM2YLR058C LSO1Q3E827 93 aa9.39□□□□□ -0.91
SHM2YLR058C RAS1P01119 309 aa9.39□□□□□ -0.91
SHM2YLR058C CTA1P15202 515 aa9.39□□□□□ -0.91
SHM2YLR058C MDH1P17505 334 aaKnown RBP RIP-Chip data9.39□□□□□ -0.91not detected
SHM2YLR058C YCL002CP25565 263 aa9.39□□□□□ -0.91
SHM2YLR058C RPL5P26321 297 aaKnown RBP9.39□□□□□ -0.91
SHM2YLR058C SUR1P33300 382 aa9.39□□□□□ -0.91
SHM2YLR058C SEC24P40482 926 aaKnown RBP9.39□□□□□ -0.91
SHM2YLR058C SAM37P50110 327 aa9.39□□□□□ -0.91
SHM2YLR058C FMP45Q07651 309 aa9.39□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 34.6 ms