RNA–Protein interactions for RNA: YJR139C

HOM6, Transcript of Homoserine dehydrogenase (L-homoserine:NADP oxidoreductase), yeast

Gene HOM6, Length 1,080 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOM6	YJR139C	AHP1	P38013	176 aa	Known RBP	11.5	□□□□□ -0.57
HOM6	YJR139C	SNF12	P53628	566 aa		11.5	□□□□□ -0.57
HOM6	YJR139C	PLB2	Q03674	706 aa		11.5	□□□□□ -0.57
HOM6	YJR139C	HRI1	Q05905	244 aa	Known RBP	11.5	□□□□□ -0.57
HOM6	YJR139C	RIB3	Q99258	208 aa		11.5	□□□□□ -0.57
HOM6	YJR139C	YAL064W-B	O13512	126 aa		11.49	□□□□□ -0.57
HOM6	YJR139C	RHO1	P06780	209 aa	Known RBP	11.49	□□□□□ -0.57
HOM6	YJR139C	SNF6	P18888	332 aa		11.49	□□□□□ -0.57
HOM6	YJR139C	NUP1	P20676	1076 aa		11.49	□□□□□ -0.57
HOM6	YJR139C	PRP19	P32523	503 aa	Known RBP	11.49	□□□□□ -0.57
HOM6	YJR139C	RPP1	P38786	293 aa		11.49	□□□□□ -0.57
HOM6	YJR139C	FET3	P38993	636 aa		11.49	□□□□□ -0.57
HOM6	YJR139C	ABZ2	Q03266	374 aa		11.49	□□□□□ -0.57
HOM6	YJR139C	SNO4	Q04902	237 aa		11.49	□□□□□ -0.57
HOM6	YJR139C	UTP21	Q06078	939 aa	Predicted RBP	11.49	□□□□□ -0.57
HOM6	YJR139C	SNT309	Q06091	175 aa	Predicted RBP	11.49	□□□□□ -0.57
HOM6	YJR139C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	11.49	□□□□□ -0.57	not detected
HOM6	YJR139C	HSP33	Q08914	237 aa	Known RBP	11.49	□□□□□ -0.57
HOM6	YJR139C	HSP32	Q08992	237 aa		11.49	□□□□□ -0.57
HOM6	YJR139C	UTR1	P21373	530 aa		11.48	□□□□□ -0.57
HOM6	YJR139C	PRE2	P30656	287 aa	Known RBP	11.48	□□□□□ -0.57
HOM6	YJR139C	TRS65	P32893	560 aa		11.48	□□□□□ -0.57
HOM6	YJR139C	YKL071W	P36086	256 aa		11.48	□□□□□ -0.57
HOM6	YJR139C	MGE1	P38523	228 aa		11.48	□□□□□ -0.57
HOM6	YJR139C	SBE22	P38814	852 aa		11.48	□□□□□ -0.57
HOM6	YJR139C	RFC4	P40339	323 aa	Known RBP	11.48	□□□□□ -0.57
HOM6	YJR139C	XBP1	P40489	647 aa		11.48	□□□□□ -0.57
HOM6	YJR139C	YRB2	P40517	327 aa		11.48	□□□□□ -0.57
HOM6	YJR139C	MPP6	P53725	186 aa	Predicted RBP	11.48	□□□□□ -0.57
HOM6	YJR139C	YNR040W	P53736	256 aa		11.48	□□□□□ -0.57
HOM6	YJR139C	ASI1	P54074	624 aa		11.48	□□□□□ -0.57
HOM6	YJR139C	TAF3	Q12297	353 aa		11.48	□□□□□ -0.57
HOM6	YJR139C	YOR343C	Q12484	108 aa		11.48	□□□□□ -0.57
HOM6	YJR139C	YDL007C-A	Q2V2Q0	85 aa		11.48	□□□□□ -0.57
HOM6	YJR139C	RTC2	P38279	296 aa		11.47	□□□□□ -0.57
HOM6	YJR139C	RPS20	P38701	121 aa	Known RBP	11.47	□□□□□ -0.57
HOM6	YJR139C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	11.47	□□□□□ -0.57	not detected
HOM6	YJR139C	KRE29	P40026	464 aa		11.47	□□□□□ -0.57
HOM6	YJR139C	CHA4	P43634	648 aa		11.47	□□□□□ -0.57
HOM6	YJR139C	YJR098C	P47139	656 aa		11.47	□□□□□ -0.57
HOM6	YJR139C	SCS7	Q03529	384 aa		11.47	□□□□□ -0.57
HOM6	YJR139C	YPR097W	Q06839	1073 aa		11.47	□□□□□ -0.57
HOM6	YJR139C	HRT1	Q08273	121 aa		11.47	□□□□□ -0.57
HOM6	YJR139C	UIP4	Q08926	304 aa		11.47	□□□□□ -0.57
HOM6	YJR139C	PEP4	P07267	405 aa	Known RBP	11.46	□□□□□ -0.57
HOM6	YJR139C	MAE1	P36013	669 aa	Known RBP	11.46	□□□□□ -0.57
HOM6	YJR139C	COS9	P36034	407 aa		11.46	□□□□□ -0.57
HOM6	YJR139C	BLM10	P43583	2143 aa		11.46	□□□□□ -0.57
HOM6	YJR139C	ALG12	P53730	551 aa		11.46	□□□□□ -0.57
HOM6	YJR139C	TFB3	Q03290	321 aa		11.46	□□□□□ -0.57
HOM6	YJR139C	WTM2	Q12206	467 aa		11.46	□□□□□ -0.57
HOM6	YJR139C	DPM1	P14020	267 aa	Known RBP	11.45	□□□□□ -0.58
HOM6	YJR139C	HAP4	P14064	554 aa		11.45	□□□□□ -0.58
HOM6	YJR139C	MAK32	P23060	363 aa		11.45	□□□□□ -0.58
HOM6	YJR139C	KRE6	P32486	720 aa		11.45	□□□□□ -0.58
HOM6	YJR139C	MSN4	P33749	630 aa		11.45	□□□□□ -0.58
HOM6	YJR139C	NIC96	P34077	839 aa		11.45	□□□□□ -0.58
HOM6	YJR139C	MRPL16	P38064	232 aa		11.45	□□□□□ -0.58
HOM6	YJR139C	CHS7	P38843	316 aa		11.45	□□□□□ -0.58
HOM6	YJR139C	NAS2	P40555	220 aa		11.45	□□□□□ -0.58
HOM6	YJR139C	QRI7	P43122	407 aa		11.45	□□□□□ -0.58
HOM6	YJR139C	IDS2	P46958	469 aa		11.45	□□□□□ -0.58
HOM6	YJR139C	MDE1	P47095	244 aa		11.45	□□□□□ -0.58
HOM6	YJR139C	BRR6	P53062	197 aa		11.45	□□□□□ -0.58
HOM6	YJR139C	SOK2	P53438	785 aa	Predicted RBP	11.45	□□□□□ -0.58
HOM6	YJR139C	SMP3	Q04174	516 aa		11.45	□□□□□ -0.58
HOM6	YJR139C	VBA4	Q04602	768 aa	Known RBP	11.45	□□□□□ -0.58
HOM6	YJR139C	GRE1	Q08969	168 aa		11.45	□□□□□ -0.58
HOM6	YJR139C	CDC39	P25655	2108 aa	Known RBP	11.45	□□□□□ -0.58
HOM6	YJR139C	SSA3	P09435	649 aa	Known RBP	11.44	□□□□□ -0.58
HOM6	YJR139C	MCM1	P11746	286 aa		11.44	□□□□□ -0.58
HOM6	YJR139C	ECM8	P38246	354 aa		11.44	□□□□□ -0.58
HOM6	YJR139C	GDI1	P39958	451 aa	Known RBP	11.44	□□□□□ -0.58
HOM6	YJR139C	RRG9	P40156	214 aa		11.44	□□□□□ -0.58
HOM6	YJR139C	MSY1	P48527	492 aa		11.44	□□□□□ -0.58
HOM6	YJR139C	VMA10	P48836	114 aa	Known RBP	11.44	□□□□□ -0.58
HOM6	YJR139C	YGL101W	P53144	215 aa		11.44	□□□□□ -0.58
HOM6	YJR139C	YMR099C	Q03161	297 aa	Known RBP	11.44	□□□□□ -0.58
HOM6	YJR139C	YMR265C	Q03508	461 aa	Known RBP	11.44	□□□□□ -0.58
HOM6	YJR139C	MRPL1	Q04599	285 aa		11.44	□□□□□ -0.58
HOM6	YJR139C	YPR147C	Q06522	304 aa	Known RBP	11.44	□□□□□ -0.58
HOM6	YJR139C	YDL176W	Q12027	708 aa		11.44	□□□□□ -0.58
HOM6	YJR139C	SET6	Q12529	373 aa		11.44	□□□□□ -0.58
HOM6	YJR139C	TFS1	P14306	219 aa		11.43	□□□□□ -0.58
HOM6	YJR139C	CYS4	P32582	507 aa	Known RBP	11.43	□□□□□ -0.58
HOM6	YJR139C	CHK1	P38147	527 aa		11.43	□□□□□ -0.58
HOM6	YJR139C	YMR262W	P38430	313 aa		11.43	□□□□□ -0.58
HOM6	YJR139C	PTH1	P38876	190 aa	Known RBP	11.43	□□□□□ -0.58
HOM6	YJR139C	STB1	P42845	420 aa		11.43	□□□□□ -0.58
HOM6	YJR139C	EXG2	P52911	562 aa		11.43	□□□□□ -0.58
HOM6	YJR139C	MHF1	Q3E835	90 aa		11.43	□□□□□ -0.58
HOM6	YJR139C	SEC16	P48415	2195 aa	Known RBP	11.43	□□□□□ -0.58
HOM6	YJR139C	TPK3	P05986	398 aa		11.42	□□□□□ -0.58
HOM6	YJR139C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	11.42	□□□□□ -0.58	not detected
HOM6	YJR139C	YBR138C	P38277	524 aa		11.42	□□□□□ -0.58
HOM6	YJR139C	MON1	P53129	644 aa		11.42	□□□□□ -0.58
HOM6	YJR139C	ELP6	Q04868	273 aa		11.42	□□□□□ -0.58
HOM6	YJR139C	COQ11	Q05892	277 aa		11.42	□□□□□ -0.58
HOM6	YJR139C	RSA3	Q05942	220 aa	Known RBP	11.42	□□□□□ -0.58
HOM6	YJR139C	EMG1	Q06287	252 aa	Known RBP	11.42	□□□□□ -0.58

Retrieved 100 of 5,963 RNA–protein pairs in 400.5 ms