RNA–Protein interactions for RNA: YHR021C

RPS27B, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS27B, Length 249 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS27B	YHR021C	SRP72	P38688	640 aa	Known RBP	0.67	□□□□□ -2.3
RPS27B	YHR021C	ATG7	P38862	630 aa		0.67	□□□□□ -2.3
RPS27B	YHR021C	MLH1	P38920	769 aa		0.67	□□□□□ -2.3
RPS27B	YHR021C	YER188W	P40103	239 aa		0.67	□□□□□ -2.3
RPS27B	YHR021C	YGL118C	P53132	145 aa		0.67	□□□□□ -2.3
RPS27B	YHR021C	LSG1	P53145	640 aa	Known RBP	0.67	□□□□□ -2.3
RPS27B	YHR021C	LST7	P53237	242 aa		0.67	□□□□□ -2.3
RPS27B	YHR021C	RET3	P53600	189 aa		0.67	□□□□□ -2.3
RPS27B	YHR021C	IES3	Q12345	250 aa		0.67	□□□□□ -2.3
RPS27B	YHR021C	ISA2	Q12425	185 aa		0.67	□□□□□ -2.3
RPS27B	YHR021C	MRX4	Q12467	430 aa		0.67	□□□□□ -2.3
RPS27B	YHR021C	RPL1A	P0CX43	217 aa	Known RBP	0.66	□□□□□ -2.3
RPS27B	YHR021C	RPL1B	P0CX44	217 aa	Known RBP	0.66	□□□□□ -2.3
RPS27B	YHR021C	DBR1	P24309	405 aa	Known RBP	0.66	□□□□□ -2.3
RPS27B	YHR021C	ITR2	P30606	609 aa		0.66	□□□□□ -2.3
RPS27B	YHR021C	EFB1	P32471	206 aa	Known RBP	0.66	□□□□□ -2.3
RPS27B	YHR021C	PCH2	P38126	564 aa		0.66	□□□□□ -2.3
RPS27B	YHR021C	SLM1	P40485	686 aa		0.66	□□□□□ -2.3
RPS27B	YHR021C	YNL320W	P42840	284 aa		0.66	□□□□□ -2.3
RPS27B	YHR021C	TPC1	P53257	314 aa		0.66	□□□□□ -2.3
RPS27B	YHR021C	YNL095C	P53932	642 aa		0.66	□□□□□ -2.3
RPS27B	YHR021C	RPN6	Q12377	434 aa		0.66	□□□□□ -2.3
RPS27B	YHR021C	RPS16A	P0CX51	143 aa	Known RBP	0.65	□□□□□ -2.31
RPS27B	YHR021C	RPS16B	P0CX52	143 aa	Known RBP	0.65	□□□□□ -2.31
RPS27B	YHR021C	MSK1	P32048	576 aa		0.65	□□□□□ -2.31
RPS27B	YHR021C	JNM1	P36224	373 aa		0.65	□□□□□ -2.31
RPS27B	YHR021C	CTM1	P38818	585 aa		0.65	□□□□□ -2.31
RPS27B	YHR021C	ASP1	P38986	381 aa	Predicted RBP	0.65	□□□□□ -2.31
RPS27B	YHR021C	DSE1	P40077	573 aa		0.65	□□□□□ -2.31
RPS27B	YHR021C	LCP5	P40079	357 aa	Predicted RBP	0.65	□□□□□ -2.31
RPS27B	YHR021C	EPL1	P43572	832 aa		0.65	□□□□□ -2.31
RPS27B	YHR021C	YNL040W	P53960	456 aa	Predicted RBP	0.65	□□□□□ -2.31
RPS27B	YHR021C	ACT1	P60010	375 aa	Known RBP	0.65	□□□□□ -2.31
RPS27B	YHR021C	RRB1	Q04225	511 aa	Known RBP	0.65	□□□□□ -2.31
RPS27B	YHR021C	AIM33	Q04516	312 aa		0.65	□□□□□ -2.31
RPS27B	YHR021C	SPE3	Q12074	293 aa	Known RBP	0.65	□□□□□ -2.31
RPS27B	YHR021C	RPN5	Q12250	445 aa	Known RBP	0.65	□□□□□ -2.31
RPS27B	YHR021C	SRN2	Q99176	213 aa		0.65	□□□□□ -2.31
RPS27B	YHR021C	DAP2	P18962	818 aa		0.64	□□□□□ -2.31
RPS27B	YHR021C	CDC42	P19073	191 aa		0.64	□□□□□ -2.31
RPS27B	YHR021C	PSO2	P30620	661 aa		0.64	□□□□□ -2.31
RPS27B	YHR021C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	0.64	□□□□□ -2.31	not detected
RPS27B	YHR021C	CSM3	Q04659	317 aa		0.64	□□□□□ -2.31
RPS27B	YHR021C	MIM1	Q08176	113 aa		0.64	□□□□□ -2.31
RPS27B	YHR021C	TFC7	Q12415	435 aa		0.64	□□□□□ -2.31
RPS27B	YHR021C	FSH3	Q99369	266 aa		0.64	□□□□□ -2.31
RPS27B	YHR021C	MHP1	P43638	1398 aa		0.64	□□□□□ -2.31
RPS27B	YHR021C	PRE7	P23724	241 aa	Known RBP	0.63	□□□□□ -2.31
RPS27B	YHR021C	YEL043W	P32618	956 aa		0.63	□□□□□ -2.31
RPS27B	YHR021C	YKL187C	P34231	750 aa		0.63	□□□□□ -2.31
RPS27B	YHR021C	SMF2	P38778	549 aa		0.63	□□□□□ -2.31
RPS27B	YHR021C	EFM4	P40516	257 aa		0.63	□□□□□ -2.31
RPS27B	YHR021C	SNL1	P40548	159 aa		0.63	□□□□□ -2.31
RPS27B	YHR021C	PMT4	P46971	762 aa		0.63	□□□□□ -2.31
RPS27B	YHR021C	SDS23	P53172	527 aa		0.63	□□□□□ -2.31
RPS27B	YHR021C	SYF2	P53277	215 aa	Predicted RBP	0.63	□□□□□ -2.31
RPS27B	YHR021C	SMP3	Q04174	516 aa		0.63	□□□□□ -2.31
RPS27B	YHR021C	GYL1	Q04322	720 aa		0.63	□□□□□ -2.31
RPS27B	YHR021C	SPH1	Q06160	661 aa		0.63	□□□□□ -2.31
RPS27B	YHR021C	PEX27	Q08580	376 aa		0.63	□□□□□ -2.31
RPS27B	YHR021C	YOR283W	Q12040	230 aa	Known RBP	0.63	□□□□□ -2.31
RPS27B	YHR021C	TRM10	Q12400	293 aa		0.63	□□□□□ -2.31
RPS27B	YHR021C	AIM45	Q12480	344 aa	Known RBP	0.63	□□□□□ -2.31
RPS27B	YHR021C	ADH3	P07246	375 aa	Known RBP	0.62	□□□□□ -2.31
RPS27B	YHR021C	CKI1	P20485	582 aa		0.62	□□□□□ -2.31
RPS27B	YHR021C	GRR1	P24814	1151 aa		0.62	□□□□□ -2.31
RPS27B	YHR021C	MRPS5	P33759	307 aa		0.62	□□□□□ -2.31
RPS27B	YHR021C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	0.62	□□□□□ -2.31	not detected
RPS27B	YHR021C	CGI121	Q03705	181 aa	Known RBP	0.62	□□□□□ -2.31
RPS27B	YHR021C	SPC19	Q03954	165 aa		0.62	□□□□□ -2.31
RPS27B	YHR021C	ARF2	P19146	181 aa	Known RBP	0.61	□□□□□ -2.31
RPS27B	YHR021C	CLB6	P32943	380 aa		0.61	□□□□□ -2.31
RPS27B	YHR021C	CSE1	P33307	960 aa		0.61	□□□□□ -2.31
RPS27B	YHR021C	EDC2	P40023	145 aa	Predicted RBP	0.61	□□□□□ -2.31
RPS27B	YHR021C	UFD1	P53044	361 aa		0.61	□□□□□ -2.31
RPS27B	YHR021C	NAT4	Q04751	285 aa		0.61	□□□□□ -2.31
RPS27B	YHR021C	ERP3	Q12403	225 aa		0.61	□□□□□ -2.31
RPS27B	YHR021C	CBP2	P03874	630 aa	Predicted RBP	0.6	□□□□□ -2.31
RPS27B	YHR021C	RAD1	P06777	1100 aa		0.6	□□□□□ -2.31
RPS27B	YHR021C	YOL163W	P0CF20	169 aa		0.6	□□□□□ -2.31
RPS27B	YHR021C	YAK1	P14680	807 aa		0.6	□□□□□ -2.31
RPS27B	YHR021C	UTR1	P21373	530 aa		0.6	□□□□□ -2.31
RPS27B	YHR021C	MXR2	P25566	168 aa		0.6	□□□□□ -2.31
RPS27B	YHR021C	NRG2	P38082	220 aa		0.6	□□□□□ -2.31
RPS27B	YHR021C	YBL028C	P38202	106 aa		0.6	□□□□□ -2.31
RPS27B	YHR021C	PIR5	P46999	287 aa		0.6	□□□□□ -2.31
RPS27B	YHR021C	DAN1	P47178	298 aa		0.6	□□□□□ -2.31
RPS27B	YHR021C	SSU72	P53538	206 aa	Predicted RBP	0.6	□□□□□ -2.31
RPS27B	YHR021C	CIK1	Q01649	594 aa		0.6	□□□□□ -2.31
RPS27B	YHR021C	RDS3	Q06835	107 aa	Predicted RBP	0.6	□□□□□ -2.31
RPS27B	YHR021C	VPS68	Q12016	184 aa		0.6	□□□□□ -2.31
RPS27B	YHR021C	TIM22	Q12328	207 aa		0.6	□□□□□ -2.31
RPS27B	YHR021C	REP1	P03871	373 aa		0.59	□□□□□ -2.31
RPS27B	YHR021C	PHO80	P20052	293 aa		0.59	□□□□□ -2.31
RPS27B	YHR021C	KTI12	P34253	313 aa	Known RBP	0.59	□□□□□ -2.31
RPS27B	YHR021C	CAB3	P36076	571 aa		0.59	□□□□□ -2.31
RPS27B	YHR021C	IML3	P38265	245 aa		0.59	□□□□□ -2.31
RPS27B	YHR021C	DSK2	P48510	373 aa		0.59	□□□□□ -2.31
RPS27B	YHR021C	MYO5	Q04439	1219 aa	Known RBP	0.59	□□□□□ -2.31
RPS27B	YHR021C	APC5	Q08683	685 aa		0.59	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 41.8 ms