RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C BRO1P48582 844 aa1.12□□□□□ -2.23
SEC3YER008C BIO4P53630 237 aa1.12□□□□□ -2.23
SEC3YER008C ZRG17P53735 605 aa1.12□□□□□ -2.23
SEC3YER008C DSL1P53847 754 aa1.12□□□□□ -2.23
SEC3YER008C SAM50P53969 484 aa1.12□□□□□ -2.23
SEC3YER008C DCR2Q05924 578 aa1.12□□□□□ -2.23
SEC3YER008C GRS2Q06817 618 aa1.12□□□□□ -2.23
SEC3YER008C RAX1Q08760 435 aa1.12□□□□□ -2.23
SEC3YER008C YRA1Q12159 226 aaKnown RBP1.12□□□□□ -2.23
SEC3YER008C POM33Q12164 279 aa1.12□□□□□ -2.23
SEC3YER008C RUD3Q12234 484 aaKnown RBP1.12□□□□□ -2.23
SEC3YER008C ICT1Q12385 394 aa1.12□□□□□ -2.23
SEC3YER008C RAD3P06839 778 aa1.11□□□□□ -2.23
SEC3YER008C SAM2P19358 384 aaKnown RBP1.11□□□□□ -2.23
SEC3YER008C SLY1P22213 666 aa1.11□□□□□ -2.23
SEC3YER008C TAF14P35189 244 aa1.11□□□□□ -2.23
SEC3YER008C RPC25P35718 212 aa1.11□□□□□ -2.23
SEC3YER008C FRE2P36033 711 aa1.11□□□□□ -2.23
SEC3YER008C MIA40P36046 403 aa1.11□□□□□ -2.23
SEC3YER008C ARC40P38328 384 aaKnown RBP1.11□□□□□ -2.23
SEC3YER008C LEU5P38702 357 aa1.11□□□□□ -2.23
SEC3YER008C PCL6P40038 420 aa1.11□□□□□ -2.23
SEC3YER008C PAC11P40960 533 aa1.11□□□□□ -2.23
SEC3YER008C RTS2P40962 232 aa1.11□□□□□ -2.23
SEC3YER008C LOC1P43586 204 aaPredicted RBP1.11□□□□□ -2.23
SEC3YER008C YDL186WP48568 277 aa1.11□□□□□ -2.23
SEC3YER008C SEH1P53011 349 aaKnown RBP1.11□□□□□ -2.23
SEC3YER008C KAP114P53067 1004 aa1.11□□□□□ -2.23
SEC3YER008C RRN9P53437 365 aa1.11□□□□□ -2.23
SEC3YER008C ESBP6P53918 673 aa1.11□□□□□ -2.23
SEC3YER008C ATX2Q12067 313 aa1.11□□□□□ -2.23
SEC3YER008C MSH5Q12175 901 aa1.11□□□□□ -2.23
SEC3YER008C ERP3Q12403 225 aa1.11□□□□□ -2.23
SEC3YER008C RPP0P05317 312 aaKnown RBP1.11□□□□□ -2.23
SEC3YER008C GPH1P06738 902 aaKnown RBP1.11□□□□□ -2.23
SEC3YER008C NAM2P11325 894 aa1.11□□□□□ -2.23
SEC3YER008C PEP5P12868 1029 aa1.11□□□□□ -2.23
SEC3YER008C CLN3P13365 580 aa1.11□□□□□ -2.23
SEC3YER008C CLC1P17891 233 aa1.11□□□□□ -2.23
SEC3YER008C GLN3P18494 730 aa1.11□□□□□ -2.23
SEC3YER008C CPR3P25719 182 aa1.11□□□□□ -2.23
SEC3YER008C MKK1P32490 508 aa1.11□□□□□ -2.23
SEC3YER008C TOA2P32774 122 aa1.11□□□□□ -2.23
SEC3YER008C RRP1P35178 278 aaPredicted RBP1.11□□□□□ -2.23
SEC3YER008C MAL32P38158 584 aa1.11□□□□□ -2.23
SEC3YER008C TCD1P38756 429 aa1.11□□□□□ -2.23
SEC3YER008C YHR122WP38829 231 aa1.11□□□□□ -2.23
SEC3YER008C CFD1P40558 293 aa1.11□□□□□ -2.23
SEC3YER008C OTU1P43558 301 aa1.11□□□□□ -2.23
SEC3YER008C IKS1P47042 667 aa1.11□□□□□ -2.23
SEC3YER008C YIP1P53039 248 aa1.11□□□□□ -2.23
SEC3YER008C ALG13P53178 202 aa1.11□□□□□ -2.23
SEC3YER008C MAL12P53341 584 aa1.11□□□□□ -2.23
SEC3YER008C WSC2P53832 503 aa1.11□□□□□ -2.23
SEC3YER008C YNL260CP53846 198 aa1.11□□□□□ -2.23
SEC3YER008C YNL040WP53960 456 aaPredicted RBP1.11□□□□□ -2.23
SEC3YER008C CSM3Q04659 317 aa1.11□□□□□ -2.23
SEC3YER008C LSP1Q12230 341 aaKnown RBP1.11□□□□□ -2.23
SEC3YER008C TPK3P05986 398 aa1.11□□□□□ -2.23
SEC3YER008C RPL5P26321 297 aaKnown RBP1.11□□□□□ -2.23
SEC3YER008C IES6P32617 166 aa1.11□□□□□ -2.23
SEC3YER008C RAD24P32641 659 aa1.11□□□□□ -2.23
SEC3YER008C YER184CP39961 794 aa1.11□□□□□ -2.23
SEC3YER008C ERG28P40030 148 aa1.11□□□□□ -2.23
SEC3YER008C FAU1P40099 211 aa1.11□□□□□ -2.23
SEC3YER008C LYS12P40495 371 aaKnown RBP1.11□□□□□ -2.23
SEC3YER008C NCA3P46955 337 aa1.11□□□□□ -2.23
SEC3YER008C GLG2P47011 380 aa1.11□□□□□ -2.23
SEC3YER008C AVT4P50944 713 aa1.11□□□□□ -2.23
SEC3YER008C CWC23P52868 283 aaPredicted RBP1.11□□□□□ -2.23
SEC3YER008C PXR1P53335 271 aaPredicted RBP1.11□□□□□ -2.23
SEC3YER008C RET3P53600 189 aa1.11□□□□□ -2.23
SEC3YER008C KTR6P54070 446 aa1.11□□□□□ -2.23
SEC3YER008C SPR6Q01684 191 aa1.11□□□□□ -2.23
SEC3YER008C MRPS17Q03246 237 aaPredicted RBP1.11□□□□□ -2.23
SEC3YER008C YIL002W-AQ3E7Z5 69 aa1.11□□□□□ -2.23
SEC3YER008C FLO11P08640 1367 aa1.1□□□□□ -2.23
SEC3YER008C THP2O13539 261 aaKnown RBP1.1□□□□□ -2.23
SEC3YER008C EXG1P23776 448 aaKnown RBP1.1□□□□□ -2.23
SEC3YER008C POF1P25576 258 aa1.1□□□□□ -2.23
SEC3YER008C RPS5P26783 225 aaKnown RBP1.1□□□□□ -2.23
SEC3YER008C SNC1P31109 117 aa1.1□□□□□ -2.23
SEC3YER008C HSP104P31539 908 aaKnown RBP1.1□□□□□ -2.23
SEC3YER008C PRP18P33411 251 aaPredicted RBP1.1□□□□□ -2.23
SEC3YER008C YBR056WP38081 501 aa1.1□□□□□ -2.23
SEC3YER008C OSH3P38713 996 aaKnown RBP1.1□□□□□ -2.23
SEC3YER008C PET8P38921 284 aa1.1□□□□□ -2.23
SEC3YER008C MMF1P40185 145 aaKnown RBP1.1□□□□□ -2.23
SEC3YER008C CDC40P40968 455 aaPredicted RBP1.1□□□□□ -2.23
SEC3YER008C YJR154WP47181 346 aa1.1□□□□□ -2.23
SEC3YER008C NOP19P53317 196 aaPredicted RBP1.1□□□□□ -2.23
SEC3YER008C PGA2P53903 129 aa1.1□□□□□ -2.23
SEC3YER008C BET4Q00618 327 aa1.1□□□□□ -2.23
SEC3YER008C PRP38Q00723 242 aaPredicted RBP1.1□□□□□ -2.23
SEC3YER008C YMR010WQ03687 405 aa1.1□□□□□ -2.23
SEC3YER008C NUP53Q03790 475 aa1.1□□□□□ -2.23
SEC3YER008C GTO3Q04806 366 aa1.1□□□□□ -2.23
SEC3YER008C NSE1Q07913 336 aa1.1□□□□□ -2.23
SEC3YER008C PLP2Q12017 286 aa1.1□□□□□ -2.23
SEC3YER008C APC2Q12440 853 aa1.1□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 44.9 ms