RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W PET111P08468 800 aa1.91□□□□□ -2.1
UBP1YDL122W TAL1P15019 335 aaKnown RBP1.91□□□□□ -2.1
UBP1YDL122W STP22P25604 385 aa1.91□□□□□ -2.1
UBP1YDL122W RAD14P28519 371 aa1.91□□□□□ -2.1
UBP1YDL122W RAD5P32849 1169 aaPredicted RBP1.91□□□□□ -2.1
UBP1YDL122W CUE2P36075 443 aaKnown RBP1.91□□□□□ -2.1
UBP1YDL122W RPL32P38061 130 aaKnown RBP1.91□□□□□ -2.1
UBP1YDL122W TSC10P38342 320 aa1.91□□□□□ -2.1
UBP1YDL122W IMD2P38697 523 aaKnown RBP1.91□□□□□ -2.1
UBP1YDL122W CIN4P39110 191 aa1.91□□□□□ -2.1
UBP1YDL122W SNO3P43544 222 aa1.91□□□□□ -2.1
UBP1YDL122W OSH6Q02201 448 aa1.91□□□□□ -2.1
UBP1YDL122W EBS1Q03466 884 aaKnown RBP1.91□□□□□ -2.1
UBP1YDL122W RAD33Q04231 177 aa1.91□□□□□ -2.1
UBP1YDL122W DCS1Q06151 350 aa1.91□□□□□ -2.1
UBP1YDL122W MMT2Q08970 484 aa1.91□□□□□ -2.1
UBP1YDL122W AHA1Q12449 350 aaKnown RBP1.91□□□□□ -2.1
UBP1YDL122W FOL3Q12676 427 aaPredicted RBP1.91□□□□□ -2.1
UBP1YDL122W YSF3P0C074 85 aaPredicted RBP1.91□□□□□ -2.1
UBP1YDL122W AIM17P23180 465 aaKnown RBP1.91□□□□□ -2.1
UBP1YDL122W BUD5P25300 642 aaPredicted RBP1.91□□□□□ -2.1
UBP1YDL122W ATP11P32453 318 aa1.91□□□□□ -2.1
UBP1YDL122W VPS17P32913 551 aa1.91□□□□□ -2.1
UBP1YDL122W RRN10P38204 145 aa1.91□□□□□ -2.1
UBP1YDL122W MLH1P38920 769 aa1.91□□□□□ -2.1
UBP1YDL122W GGC1P38988 300 aa1.91□□□□□ -2.1
UBP1YDL122W YJR141WP47172 347 aaPredicted RBP1.91□□□□□ -2.1
UBP1YDL122W PGU1P47180 361 aa1.91□□□□□ -2.1
UBP1YDL122W TIM11P81449 96 aaPredicted RBP1.91□□□□□ -2.1
UBP1YDL122W NUP100Q02629 959 aa1.91□□□□□ -2.1
UBP1YDL122W GRX3Q03835 250 aa1.91□□□□□ -2.1
UBP1YDL122W APC4Q04601 652 aa1.91□□□□□ -2.1
UBP1YDL122W ARO10Q06408 635 aa1.91□□□□□ -2.1
UBP1YDL122W YPR174CQ06616 221 aaPredicted RBP1.91□□□□□ -2.1
UBP1YDL122W YFH1Q07540 174 aa1.91□□□□□ -2.1
UBP1YDL122W YPR022CQ12139 1133 aa1.91□□□□□ -2.1
UBP1YDL122W VAM3Q12241 283 aa1.91□□□□□ -2.1
UBP1YDL122W PRP46Q12417 451 aaPredicted RBP1.91□□□□□ -2.1
UBP1YDL122W RPL22AP05749 121 aaKnown RBP1.9□□□□□ -2.1
UBP1YDL122W GPH1P06738 902 aaKnown RBP1.9□□□□□ -2.1
UBP1YDL122W CDC21P06785 304 aa1.9□□□□□ -2.1
UBP1YDL122W DBP3P20447 523 aaKnown RBP1.9□□□□□ -2.1
UBP1YDL122W MIG1P27705 504 aa1.9□□□□□ -2.1
UBP1YDL122W MRPL39P36533 70 aa1.9□□□□□ -2.1
UBP1YDL122W ZTA1P38230 334 aaKnown RBP1.9□□□□□ -2.1
UBP1YDL122W VPS41P38959 992 aa1.9□□□□□ -2.1
UBP1YDL122W VHS2P40463 436 aa1.9□□□□□ -2.1
UBP1YDL122W YIL029CP40538 142 aa1.9□□□□□ -2.1
UBP1YDL122W ADO1P47143 340 aaKnown RBP1.9□□□□□ -2.1
UBP1YDL122W ECM27P47144 725 aa1.9□□□□□ -2.1
UBP1YDL122W RMD9P53140 646 aaKnown RBP1.9□□□□□ -2.1
UBP1YDL122W TIM13P53299 105 aa1.9□□□□□ -2.1
UBP1YDL122W LSM3P57743 89 aaKnown RBP1.9□□□□□ -2.1
UBP1YDL122W BET4Q00618 327 aa1.9□□□□□ -2.1
UBP1YDL122W BOP2Q06150 570 aa1.9□□□□□ -2.1
UBP1YDL122W BI2P03873 423 aa1.9□□□□□ -2.11
UBP1YDL122W RHO2P06781 192 aa1.9□□□□□ -2.11
UBP1YDL122W MRP2P10663 115 aaPredicted RBP1.9□□□□□ -2.11
UBP1YDL122W RAP1P11938 827 aa1.9□□□□□ -2.11
UBP1YDL122W ARO3P14843 370 aaKnown RBP1.9□□□□□ -2.11
UBP1YDL122W YAP1P19880 650 aaKnown RBP1.9□□□□□ -2.11
UBP1YDL122W NDI1P32340 513 aa1.9□□□□□ -2.11
UBP1YDL122W IME2P32581 645 aa1.9□□□□□ -2.11
UBP1YDL122W GLG1P36143 616 aa1.9□□□□□ -2.11
UBP1YDL122W UTP18P40362 594 aaPredicted RBP1.9□□□□□ -2.11
UBP1YDL122W ATM1P40416 690 aa1.9□□□□□ -2.11
UBP1YDL122W YFL051CP43552 160 aa1.9□□□□□ -2.11
UBP1YDL122W AIP1P46680 615 aaKnown RBP1.9□□□□□ -2.11
UBP1YDL122W ATG27P46989 271 aa1.9□□□□□ -2.11
UBP1YDL122W RPA34P47006 233 aaPredicted RBP1.9□□□□□ -2.11
UBP1YDL122W ALB1P47019 175 aaPredicted RBP1.9□□□□□ -2.11
UBP1YDL122W AIM22P47051 409 aa1.9□□□□□ -2.11
UBP1YDL122W YGR126WP53274 230 aa1.9□□□□□ -2.11
UBP1YDL122W YLR460CP54007 376 aa1.9□□□□□ -2.11
UBP1YDL122W SMX3P54999 86 aaPredicted RBP1.9□□□□□ -2.11
UBP1YDL122W RSM23Q01163 450 aa1.9□□□□□ -2.11
UBP1YDL122W MSC1Q03104 513 aa1.9□□□□□ -2.11
UBP1YDL122W RIM9Q04734 239 aa1.9□□□□□ -2.11
UBP1YDL122W DCR2Q05924 578 aa1.9□□□□□ -2.11
UBP1YDL122W RAF1Q06891 181 aa1.9□□□□□ -2.11
UBP1YDL122W YPL150WQ12152 901 aa1.9□□□□□ -2.11
UBP1YDL122W YIL002W-AQ3E7Z5 69 aa1.9□□□□□ -2.11
UBP1YDL122W BI3Q9ZZW7 517 aa1.9□□□□□ -2.11
UBP1YDL122W COR1P07256 457 aa1.89□□□□□ -2.11
UBP1YDL122W YAR066WP0CX18 203 aa1.89□□□□□ -2.11
UBP1YDL122W YHR214WP0CX19 203 aa1.89□□□□□ -2.11
UBP1YDL122W RPS5P26783 225 aaKnown RBP1.89□□□□□ -2.11
UBP1YDL122W RIM1P32445 135 aaKnown RBP1.89□□□□□ -2.11
UBP1YDL122W SUI1P32911 108 aaKnown RBP1.89□□□□□ -2.11
UBP1YDL122W RCK1P38622 512 aa1.89□□□□□ -2.11
UBP1YDL122W ANS1P38832 159 aa1.89□□□□□ -2.11
UBP1YDL122W MBB1P39534 108 aa1.89□□□□□ -2.11
UBP1YDL122W CIN1P40987 1014 aa1.89□□□□□ -2.11
UBP1YDL122W YFL015CP43578 164 aa1.89□□□□□ -2.11
UBP1YDL122W TAX4P47030 604 aa1.89□□□□□ -2.11
UBP1YDL122W YJL043WP47053 257 aa1.89□□□□□ -2.11
UBP1YDL122W EFM3P47163 339 aa1.89□□□□□ -2.11
UBP1YDL122W OCA2P53949 197 aa1.89□□□□□ -2.11
UBP1YDL122W PET117Q02771 107 aa1.89□□□□□ -2.11
UBP1YDL122W RRN5Q02983 363 aa1.89□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 40.9 ms