RNA–Protein interactions for RNA: YAL014C

SYN8, Transcript of Endosomal SNARE related to mammalian syntaxin 8, yeast

Gene SYN8, Length 768 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SYN8	YAL014C	PAC10	P48363	199 aa		4.91	□□□□□ -1.62
SYN8	YAL014C	DCP2	P53550	970 aa	Known RBP	4.91	□□□□□ -1.62
SYN8	YAL014C	YDR249C	Q03787	373 aa		4.91	□□□□□ -1.62
SYN8	YAL014C	BUR2	Q05949	395 aa		4.91	□□□□□ -1.62
SYN8	YAL014C	ARR3	Q06598	404 aa		4.91	□□□□□ -1.62
SYN8	YAL014C	COS7	Q07788	383 aa		4.91	□□□□□ -1.62
SYN8	YAL014C	SGT1	Q08446	395 aa		4.91	□□□□□ -1.62
SYN8	YAL014C	YDL211C	Q12121	372 aa		4.91	□□□□□ -1.62
SYN8	YAL014C	MET3	P08536	511 aa		4.9	□□□□□ -1.63
SYN8	YAL014C	PDX1	P16451	410 aa		4.9	□□□□□ -1.63
SYN8	YAL014C	PRP28	P23394	588 aa		4.9	□□□□□ -1.63
SYN8	YAL014C	CTS1	P29029	562 aa		4.9	□□□□□ -1.63
SYN8	YAL014C	ARP2	P32381	391 aa	Known RBP	4.9	□□□□□ -1.63
SYN8	YAL014C	SEN34	P39707	275 aa		4.9	□□□□□ -1.63
SYN8	YAL014C	AYR1	P40471	297 aa		4.9	□□□□□ -1.63
SYN8	YAL014C	YFR054C	P43622	192 aa		4.9	□□□□□ -1.63
SYN8	YAL014C	AAD10	P47182	288 aa		4.9	□□□□□ -1.63
SYN8	YAL014C	MSY1	P48527	492 aa		4.9	□□□□□ -1.63
SYN8	YAL014C	TOM22	P49334	152 aa		4.9	□□□□□ -1.63
SYN8	YAL014C	IMA1	P53051	589 aa		4.9	□□□□□ -1.63
SYN8	YAL014C	LSG1	P53145	640 aa	Known RBP	4.9	□□□□□ -1.63
SYN8	YAL014C	MAL12	P53341	584 aa		4.9	□□□□□ -1.63
SYN8	YAL014C	CUS2	P53830	285 aa	Predicted RBP	4.9	□□□□□ -1.63
SYN8	YAL014C	NAT4	Q04751	285 aa		4.9	□□□□□ -1.63
SYN8	YAL014C	STE23	Q06010	1027 aa		4.9	□□□□□ -1.63
SYN8	YAL014C	YEH2	Q07950	538 aa		4.9	□□□□□ -1.63
SYN8	YAL014C	TMC1	Q08422	150 aa	Predicted RBP	4.9	□□□□□ -1.63
SYN8	YAL014C	BSC1	Q12140	328 aa		4.9	□□□□□ -1.63
SYN8	YAL014C	JLP1	Q12358	412 aa		4.9	□□□□□ -1.63
SYN8	YAL014C	Q0297	Q9ZZV8	51 aa		4.9	□□□□□ -1.63
SYN8	YAL014C	MDH2	P22133	377 aa		4.89	□□□□□ -1.63
SYN8	YAL014C	PBN1	P25580	416 aa		4.89	□□□□□ -1.63
SYN8	YAL014C	NUP2	P32499	720 aa		4.89	□□□□□ -1.63
SYN8	YAL014C	YOR062C	P36025	268 aa		4.89	□□□□□ -1.63
SYN8	YAL014C	PRS3	P38689	320 aa	Known RBP	4.89	□□□□□ -1.63
SYN8	YAL014C	VPS41	P38959	992 aa		4.89	□□□□□ -1.63
SYN8	YAL014C	YJL068C	P40363	299 aa		4.89	□□□□□ -1.63
SYN8	YAL014C	ARF3	P40994	183 aa	RIP-Chip data	4.89	□□□□□ -1.63	not detected
SYN8	YAL014C	YGR054W	P53235	642 aa	Known RBP	4.89	□□□□□ -1.63
SYN8	YAL014C	SNX41	Q04053	625 aa		4.89	□□□□□ -1.63
SYN8	YAL014C	FAR8	Q05040	523 aa		4.89	□□□□□ -1.63
SYN8	YAL014C	YHC1	Q05900	231 aa	Known RBP	4.89	□□□□□ -1.63
SYN8	YAL014C	GPN2	Q08726	347 aa	Predicted RBP	4.89	□□□□□ -1.63
SYN8	YAL014C	UAF30	Q08747	228 aa		4.89	□□□□□ -1.63
SYN8	YAL014C	PFK27	Q12471	397 aa	Predicted RBP	4.89	□□□□□ -1.63
SYN8	YAL014C	SAS5	Q99314	248 aa		4.89	□□□□□ -1.63
SYN8	YAL014C	DYN1	P36022	4092 aa		4.89	□□□□□ -1.63
SYN8	YAL014C	SIR3	P06701	978 aa		4.88	□□□□□ -1.63
SYN8	YAL014C	YMR085W	P0CF18	432 aa		4.88	□□□□□ -1.63
SYN8	YAL014C	ZWF1	P11412	505 aa	Known RBP	4.88	□□□□□ -1.63
SYN8	YAL014C	AIM17	P23180	465 aa	Known RBP	4.88	□□□□□ -1.63
SYN8	YAL014C	CTR86	P25355	563 aa		4.88	□□□□□ -1.63
SYN8	YAL014C	DMC1	P25453	334 aa		4.88	□□□□□ -1.63
SYN8	YAL014C	FAA2	P39518	744 aa		4.88	□□□□□ -1.63
SYN8	YAL014C	QRI1	P43123	477 aa	Known RBP	4.88	□□□□□ -1.63
SYN8	YAL014C	YFL051C	P43552	160 aa		4.88	□□□□□ -1.63
SYN8	YAL014C	YJL163C	P46996	555 aa		4.88	□□□□□ -1.63
SYN8	YAL014C	COS6	P53344	381 aa		4.88	□□□□□ -1.63
SYN8	YAL014C	OGG1	P53397	376 aa	Predicted RBP	4.88	□□□□□ -1.63
SYN8	YAL014C	DBP6	P53734	629 aa	Known RBP	4.88	□□□□□ -1.63
SYN8	YAL014C	RHO5	P53879	331 aa	Known RBP	4.88	□□□□□ -1.63
SYN8	YAL014C	YKU80	Q04437	629 aa		4.88	□□□□□ -1.63
SYN8	YAL014C	COX20	Q04935	205 aa		4.88	□□□□□ -1.63
SYN8	YAL014C	RAF1	Q06891	181 aa		4.88	□□□□□ -1.63
SYN8	YAL014C	IZH3	Q07959	543 aa		4.88	□□□□□ -1.63
SYN8	YAL014C	FRE5	Q08908	694 aa		4.88	□□□□□ -1.63
SYN8	YAL014C	FMP40	Q08968	688 aa	Predicted RBP	4.88	□□□□□ -1.63
SYN8	YAL014C	BLM10	P43583	2143 aa		4.88	□□□□□ -1.63
SYN8	YAL014C	BPH1	P25356	2167 aa		4.88	□□□□□ -1.63
SYN8	YAL014C	RNA1	P11745	407 aa	Known RBP	4.87	□□□□□ -1.63
SYN8	YAL014C	MRP13	P12686	339 aa		4.87	□□□□□ -1.63
SYN8	YAL014C	CBS1	P14066	229 aa		4.87	□□□□□ -1.63
SYN8	YAL014C	KSS1	P14681	368 aa		4.87	□□□□□ -1.63
SYN8	YAL014C	SAN1	P22470	610 aa		4.87	□□□□□ -1.63
SYN8	YAL014C	ERG4	P25340	473 aa		4.87	□□□□□ -1.63
SYN8	YAL014C	PRE2	P30656	287 aa	Known RBP	4.87	□□□□□ -1.63
SYN8	YAL014C	HIS7	P33734	552 aa	Known RBP	4.87	□□□□□ -1.63
SYN8	YAL014C	YKL187C	P34231	750 aa		4.87	□□□□□ -1.63
SYN8	YAL014C	YBR032W	P38223	100 aa		4.87	□□□□□ -1.63
SYN8	YAL014C	ECM34	P38728	170 aa		4.87	□□□□□ -1.63
SYN8	YAL014C	PHO23	P50947	330 aa		4.87	□□□□□ -1.63
SYN8	YAL014C	RSN1	Q03516	953 aa		4.87	□□□□□ -1.63
SYN8	YAL014C	EKI1	Q03764	534 aa		4.87	□□□□□ -1.63
SYN8	YAL014C	HOF1	Q05080	669 aa		4.87	□□□□□ -1.63
SYN8	YAL014C	PSY3	Q12318	242 aa		4.87	□□□□□ -1.63
SYN8	YAL014C	RPN6	Q12377	434 aa		4.87	□□□□□ -1.63
SYN8	YAL014C	GEP5	Q12393	293 aa		4.87	□□□□□ -1.63
SYN8	YAL014C	YKL018C-A	Q3E7A7	99 aa		4.87	□□□□□ -1.63
SYN8	YAL014C	DET1	Q99288	334 aa	Known RBP	4.87	□□□□□ -1.63
SYN8	YAL014C	SEC12	P11655	471 aa		4.86	□□□□□ -1.63
SYN8	YAL014C	RPC19	P28000	142 aa	Known RBP	4.86	□□□□□ -1.63
SYN8	YAL014C	MRPL39	P36533	70 aa		4.86	□□□□□ -1.63
SYN8	YAL014C	ZTA1	P38230	334 aa	Known RBP	4.86	□□□□□ -1.63
SYN8	YAL014C	YHL037C	P38733	133 aa		4.86	□□□□□ -1.63
SYN8	YAL014C	FET3	P38993	636 aa		4.86	□□□□□ -1.63
SYN8	YAL014C	AVT7	P40501	490 aa		4.86	□□□□□ -1.63
SYN8	YAL014C	GAB1	P41733	394 aa		4.86	□□□□□ -1.63
SYN8	YAL014C	MRM2	P53123	320 aa		4.86	□□□□□ -1.63
SYN8	YAL014C	YPL039W	Q03080	316 aa		4.86	□□□□□ -1.63
SYN8	YAL014C	YDR476C	Q03362	224 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 48.3 ms