RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR42, Length 351 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR42snR42 PBS2P08018 668 aa5.19□□□□□ -1.58
snR42snR42 YLR346CQ06139 101 aa5.19□□□□□ -1.58
snR42snR42 HXT10P43581 546 aa5.18□□□□□ -1.58
snR42snR42 CKB1P43639 278 aa5.18□□□□□ -1.58
snR42snR42 UGA3P26370 528 aa5.17□□□□□ -1.58
snR42snR42 PTK2P47116 818 aaKnown RBP5.17□□□□□ -1.58
snR42snR42 OPT2Q06593 877 aa5.17□□□□□ -1.58
snR42snR42 RKR1Q04781 1562 aa5.16□□□□□ -1.58
snR42snR42 TY1B-BRQ12193 1756 aa5.16□□□□□ -1.58
snR42snR42 TY1B-GR3Q12316 1755 aa5.16□□□□□ -1.58
snR42snR42 TY1B-ORQ92393 1755 aa5.16□□□□□ -1.58
snR42snR42 PAN1P32521 1480 aa5.16□□□□□ -1.58
snR42snR42 TRK2P28584 889 aa5.16□□□□□ -1.58
snR42snR42 SRF1Q12516 437 aa5.16□□□□□ -1.58
snR42snR42 DNF1P32660 1571 aa5.16□□□□□ -1.58
snR42snR42 TOP2P06786 1428 aaKnown RBP5.15□□□□□ -1.58
snR42snR42 PDC1P06169 563 aaKnown RBP5.15□□□□□ -1.59
snR42snR42 GLY1P37303 387 aaKnown RBP5.15□□□□□ -1.59
snR42snR42 MET5P47169 1442 aa5.14□□□□□ -1.59
snR42snR42 TY2B-BQ12491 1770 aa5.14□□□□□ -1.59
snR42snR42 RTT106P40161 455 aa5.14□□□□□ -1.59
snR42snR42 YGR035CP53222 116 aa5.14□□□□□ -1.59
snR42snR42 MMS22Q06164 1454 aa5.13□□□□□ -1.59
snR42snR42 NUP85P46673 744 aa5.13□□□□□ -1.59
snR42snR42 TEA1P47988 759 aa5.13□□□□□ -1.59
snR42snR42 MAM3Q12296 706 aa5.13□□□□□ -1.59
snR42snR42 TY1B-DR3Q99231 1755 aa5.13□□□□□ -1.59
snR42snR42 TRM732Q03496 1420 aa5.13□□□□□ -1.59
snR42snR42 RPA190P10964 1664 aaKnown RBP5.12□□□□□ -1.59
snR42snR42 TY1B-HO13535 1793 aa5.12□□□□□ -1.59
snR42snR42 TY1B-DR5P0C2I2 1755 aa5.12□□□□□ -1.59
snR42snR42 TY1B-DR6P0C2I3 1755 aa5.12□□□□□ -1.59
snR42snR42 TY1B-LR2P0C2I5 1755 aa5.12□□□□□ -1.59
snR42snR42 TY1B-LR3P0C2I6 1755 aaKnown RBP5.12□□□□□ -1.59
snR42snR42 TY1B-PR1P0C2I9 1755 aaKnown RBP5.12□□□□□ -1.59
snR42snR42 TY1B-PR2P0C2J0 1756 aa5.12□□□□□ -1.59
snR42snR42 TY1B-PR3P0C2J1 1755 aaKnown RBP5.12□□□□□ -1.59
snR42snR42 TY1B-JR1P47098 1755 aa5.12□□□□□ -1.59
snR42snR42 TY1B-ML2Q03434 1755 aaKnown RBP5.12□□□□□ -1.59
snR42snR42 TY1B-ER1Q03612 1755 aa5.12□□□□□ -1.59
snR42snR42 TY1B-ML1Q04711 1755 aaKnown RBP5.12□□□□□ -1.59
snR42snR42 TY1B-GR2Q12269 1755 aa5.12□□□□□ -1.59
snR42snR42 TY1B-OLQ12273 1755 aa5.12□□□□□ -1.59
snR42snR42 TY1B-PLQ12414 1755 aaKnown RBP5.12□□□□□ -1.59
snR42snR42 POL1P13382 1468 aa5.12□□□□□ -1.59
snR42snR42 STU1P38198 1513 aa5.12□□□□□ -1.59
snR42snR42 SCW11P53189 542 aa5.11□□□□□ -1.59
snR42snR42 NIS1P53939 407 aa5.11□□□□□ -1.59
snR42snR42 LTE1P07866 1435 aa5.11□□□□□ -1.59
snR42snR42 KIP2P28743 706 aa5.1□□□□□ -1.59
snR42snR42 MRT4P33201 236 aaKnown RBP5.1□□□□□ -1.59
snR42snR42 YIR007WP40566 764 aa5.1□□□□□ -1.59
snR42snR42 HPF1Q05164 967 aa5.1□□□□□ -1.59
snR42snR42 ALR1Q08269 859 aa5.1□□□□□ -1.59
snR42snR42 TYW1Q08960 810 aaKnown RBP5.1□□□□□ -1.59
snR42snR42 YOR1P53049 1477 aa5.09□□□□□ -1.59
snR42snR42 MIP1P15801 1254 aa5.09□□□□□ -1.59
snR42snR42 SPP41P38904 1435 aa5.08□□□□□ -1.6
snR42snR42 SMC4Q12267 1418 aa5.08□□□□□ -1.6
snR42snR42 SLY41P22215 453 aa5.08□□□□□ -1.6
snR42snR42 IXR1P33417 597 aa5.08□□□□□ -1.6
snR42snR42 RPA14P50106 137 aa5.08□□□□□ -1.6
snR42snR42 YPR097WQ06839 1073 aa5.08□□□□□ -1.6
snR42snR42 TY1A-BLQ12266 440 aa5.08□□□□□ -1.6
snR42snR42 GEA2P39993 1459 aaKnown RBP5.07□□□□□ -1.6
snR42snR42 IES2P40154 320 aa5.07□□□□□ -1.6
snR42snR42 DSF2P38213 736 aa5.06□□□□□ -1.6
snR42snR42 PUS6P53294 404 aa5.06□□□□□ -1.6
snR42snR42 NUP159P40477 1460 aa5.06□□□□□ -1.6
snR42snR42 FPK1P53739 893 aa5.05□□□□□ -1.6
snR42snR42 TBF1Q02457 562 aa5.05□□□□□ -1.6
snR42snR42 ITT1Q04638 464 aa5.05□□□□□ -1.6
snR42snR42 YDL206WQ12424 762 aa5.05□□□□□ -1.6
snR42snR42 NUP42P49686 430 aaKnown RBP5.04□□□□□ -1.6
snR42snR42 UBP2Q01476 1272 aa5.04□□□□□ -1.6
snR42snR42 YMR196WQ04336 1088 aa5.04□□□□□ -1.6
snR42snR42 YPR204WQ08995 1032 aa5.04□□□□□ -1.6
snR42snR42 VTH1P40438 1549 aa5.03□□□□□ -1.6
snR42snR42 VTH2P40890 1549 aa5.03□□□□□ -1.6
snR42snR42 ARG82P07250 355 aa5.03□□□□□ -1.6
snR42snR42 LSC2P53312 427 aa5.03□□□□□ -1.6
snR42snR42 TSC11P40061 1430 aa5.03□□□□□ -1.6
snR42snR42 DRS2P39524 1355 aa5.03□□□□□ -1.6
snR42snR42 NTE1Q04958 1679 aa5.02□□□□□ -1.61
snR42snR42 YRF1-1P0CX20 1796 aa5.02□□□□□ -1.61
snR42snR42 YRF1-5P0CX21 1796 aa5.02□□□□□ -1.61
snR42snR42 YRF1-8P0CX22 1796 aa5.02□□□□□ -1.61
snR42snR42 TY1B-JR2P47100 1755 aaKnown RBP5.02□□□□□ -1.61
snR42snR42 TY1B-ER2Q03619 1755 aa5.02□□□□□ -1.61
snR42snR42 TY1B-MR1Q04214 1755 aa5.02□□□□□ -1.61
snR42snR42 TY1B-MR2Q04670 1755 aaKnown RBP5.02□□□□□ -1.61
snR42snR42 TY1B-LR1Q12088 1755 aaKnown RBP5.02□□□□□ -1.61
snR42snR42 TY1B-NL1Q12112 1755 aa5.02□□□□□ -1.61
snR42snR42 TY1B-GR1Q12141 1755 aa5.02□□□□□ -1.61
snR42snR42 TY1B-BLQ12490 1755 aa5.02□□□□□ -1.61
snR42snR42 ICP55P40051 511 aa5.02□□□□□ -1.61
snR42snR42 BUB1P41695 1021 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
snR42snR42 YTA7P40340 1379 aa5.02□□□□□ -1.61
snR42snR42 VPS15P22219 1454 aa5.01□□□□□ -1.61
snR42snR42 AAD14P42884 376 aa5.01□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms