RNA–Protein interactions for RNA: YPL147W

PXA1, Transcript of Subunit of a heterodimeric peroxisomal ABC transport complex, yeast

Gene PXA1, Length 2,613 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PXA1	YPL147W	PKH1	Q03407	766 aa		5.84	□□□□□ -1.47
PXA1	YPL147W	SAC3	P46674	1301 aa		5.84	□□□□□ -1.47
PXA1	YPL147W	SEC3	P33332	1336 aa	Known RBP	5.83	□□□□□ -1.48
PXA1	YPL147W	OCA5	P38738	679 aa		5.83	□□□□□ -1.48
PXA1	YPL147W	HSP42	Q12329	375 aa		5.83	□□□□□ -1.48
PXA1	YPL147W	ERP4	Q12450	207 aa		5.83	□□□□□ -1.48
PXA1	YPL147W	VMA4	P22203	233 aa	Known RBP	5.82	□□□□□ -1.48
PXA1	YPL147W	GRX3	Q03835	250 aa		5.82	□□□□□ -1.48
PXA1	YPL147W	SSA4	P22202	642 aa	Known RBP	5.82	□□□□□ -1.48
PXA1	YPL147W	BOI2	P39969	1040 aa		5.82	□□□□□ -1.48
PXA1	YPL147W	TCB1	Q12466	1186 aa		5.82	□□□□□ -1.48
PXA1	YPL147W	TFC3	P34111	1160 aa		5.81	□□□□□ -1.48
PXA1	YPL147W	NMD3	P38861	518 aa	Known RBP	5.81	□□□□□ -1.48
PXA1	YPL147W	GDE1	Q02979	1223 aa		5.81	□□□□□ -1.48
PXA1	YPL147W	HEL2	Q05580	639 aa	Known RBP	5.81	□□□□□ -1.48
PXA1	YPL147W	TY1B-NL2	Q99337	1749 aa	Known RBP	5.81	□□□□□ -1.48
PXA1	YPL147W	STU1	P38198	1513 aa		5.81	□□□□□ -1.48
PXA1	YPL147W	TAF1	P46677	1066 aa		5.81	□□□□□ -1.48
PXA1	YPL147W	NNF1	P47149	201 aa		5.81	□□□□□ -1.48
PXA1	YPL147W	MAK10	Q02197	733 aa		5.81	□□□□□ -1.48
PXA1	YPL147W	TY1B-A	O13527	1196 aa	Known RBP	5.8	□□□□□ -1.48
PXA1	YPL147W	KAR1	P11927	433 aa		5.8	□□□□□ -1.48
PXA1	YPL147W	YAH1	Q12184	172 aa	Known RBP	5.8	□□□□□ -1.48
PXA1	YPL147W	CLF1	Q12309	687 aa	Predicted RBP	5.8	□□□□□ -1.48
PXA1	YPL147W	PPH3	P32345	308 aa		5.8	□□□□□ -1.48
PXA1	YPL147W	MUM2	P38236	366 aa		5.8	□□□□□ -1.48
PXA1	YPL147W	COG4	Q06096	861 aa		5.8	□□□□□ -1.48
PXA1	YPL147W	PPG1	P32838	368 aa		5.79	□□□□□ -1.48
PXA1	YPL147W	IMH1	Q06704	911 aa	Known RBP	5.79	□□□□□ -1.48
PXA1	YPL147W	SUB2	Q07478	446 aa	Known RBP	5.79	□□□□□ -1.48
PXA1	YPL147W	USO1	P25386	1790 aa		5.79	□□□□□ -1.48
PXA1	YPL147W	KEX1	P09620	729 aa		5.79	□□□□□ -1.48
PXA1	YPL147W	YPR172W	Q06608	200 aa		5.79	□□□□□ -1.48
PXA1	YPL147W	NOP58	Q12499	511 aa	Known RBP	5.79	□□□□□ -1.48
PXA1	YPL147W	RAD51	P25454	400 aa		5.78	□□□□□ -1.48
PXA1	YPL147W	HEM3	P28789	327 aa		5.78	□□□□□ -1.48
PXA1	YPL147W	HOS2	P53096	452 aa	Predicted RBP	5.78	□□□□□ -1.48
PXA1	YPL147W	SGT2	Q12118	346 aa	Known RBP	5.78	□□□□□ -1.48
PXA1	YPL147W	MET1	P36150	593 aa		5.78	□□□□□ -1.48
PXA1	YPL147W	YOL057W	Q08225	711 aa		5.78	□□□□□ -1.48
PXA1	YPL147W	MAM3	Q12296	706 aa		5.78	□□□□□ -1.48
PXA1	YPL147W	SWI3	P32591	825 aa		5.78	□□□□□ -1.48
PXA1	YPL147W	STE5	P32917	917 aa		5.78	□□□□□ -1.48
PXA1	YPL147W	MCM1	P11746	286 aa		5.77	□□□□□ -1.49
PXA1	YPL147W	PWP2	P25635	923 aa	Known RBP	5.77	□□□□□ -1.49
PXA1	YPL147W	RNH70	P53331	553 aa		5.77	□□□□□ -1.49
PXA1	YPL147W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	5.77	□□□□□ -1.49	not detected
PXA1	YPL147W	YAP3	P38749	330 aa		5.77	□□□□□ -1.49
PXA1	YPL147W	MDM1	Q01846	1127 aa		5.77	□□□□□ -1.49
PXA1	YPL147W	YLR257W	Q06146	321 aa	Known RBP	5.77	□□□□□ -1.49
PXA1	YPL147W	HAP1	P0CE41	1502 aa		5.76	□□□□□ -1.49
PXA1	YPL147W	SSB1	P11484	613 aa	Known RBP	5.76	□□□□□ -1.49
PXA1	YPL147W	RPN12	P32496	274 aa		5.76	□□□□□ -1.49
PXA1	YPL147W	SSB2	P40150	613 aa	Known RBP	5.76	□□□□□ -1.49
PXA1	YPL147W	SEC9	P40357	651 aa		5.76	□□□□□ -1.49
PXA1	YPL147W	TFG1	P41895	735 aa	Predicted RBP	5.76	□□□□□ -1.49
PXA1	YPL147W	PRY3	P47033	881 aa		5.76	□□□□□ -1.49
PXA1	YPL147W	NNF2	P53253	936 aa		5.76	□□□□□ -1.49
PXA1	YPL147W	CEF1	Q03654	590 aa	Predicted RBP	5.76	□□□□□ -1.49
PXA1	YPL147W	KEL2	P50090	882 aa		5.76	□□□□□ -1.49
PXA1	YPL147W	BNI5	P53890	448 aa	Known RBP	5.76	□□□□□ -1.49
PXA1	YPL147W	RIA1	P53893	1110 aa		5.76	□□□□□ -1.49
PXA1	YPL147W	VHR2	P40041	505 aa		5.75	□□□□□ -1.49
PXA1	YPL147W	CST6	P40535	587 aa		5.75	□□□□□ -1.49
PXA1	YPL147W	TAN1	P53072	289 aa	Predicted RBP	5.75	□□□□□ -1.49
PXA1	YPL147W	VID30	P53076	958 aa		5.75	□□□□□ -1.49
PXA1	YPL147W	HUL5	P53119	910 aa		5.75	□□□□□ -1.49
PXA1	YPL147W	SSF2	Q12153	453 aa	Predicted RBP	5.75	□□□□□ -1.49
PXA1	YPL147W	SAP190	P36123	1033 aa		5.75	□□□□□ -1.49
PXA1	YPL147W	MAL31	P38156	614 aa		5.75	□□□□□ -1.49
PXA1	YPL147W	NKP1	Q12493	238 aa		5.74	□□□□□ -1.49
PXA1	YPL147W	DNM1	P54861	757 aa		5.74	□□□□□ -1.49
PXA1	YPL147W	OYE2	Q03558	400 aa	Known RBP	5.74	□□□□□ -1.49
PXA1	YPL147W	STH1	P32597	1359 aa		5.73	□□□□□ -1.49
PXA1	YPL147W	RPL34A	P87262	121 aa	Predicted RBP	5.73	□□□□□ -1.49
PXA1	YPL147W	CTF4	Q01454	927 aa		5.73	□□□□□ -1.49
PXA1	YPL147W	SRP1	Q02821	542 aa	Known RBP	5.73	□□□□□ -1.49
PXA1	YPL147W	PRP3	Q03338	469 aa	Predicted RBP	5.73	□□□□□ -1.49
PXA1	YPL147W	YLL054C	Q12244	843 aa		5.73	□□□□□ -1.49
PXA1	YPL147W	CEX1	Q12453	761 aa		5.73	□□□□□ -1.49
PXA1	YPL147W	DPB3	P27344	201 aa		5.73	□□□□□ -1.49
PXA1	YPL147W	YMR124W	P39523	943 aa	Known RBP	5.73	□□□□□ -1.49
PXA1	YPL147W	ETT1	Q08421	412 aa	Known RBP	5.73	□□□□□ -1.49
PXA1	YPL147W	SNU66	Q12420	587 aa	Predicted RBP	5.73	□□□□□ -1.49
PXA1	YPL147W	BRF1	P29056	596 aa		5.72	□□□□□ -1.49
PXA1	YPL147W	PIM1	P36775	1133 aa		5.72	□□□□□ -1.49
PXA1	YPL147W	GRX7	P38068	203 aa		5.72	□□□□□ -1.49
PXA1	YPL147W	VTC3	Q02725	835 aa		5.72	□□□□□ -1.49
PXA1	YPL147W	NUP157	P40064	1391 aa	Known RBP	5.72	□□□□□ -1.49
PXA1	YPL147W	CYB2	P00175	591 aa		5.72	□□□□□ -1.49
PXA1	YPL147W	RRD1	P40454	393 aa	Known RBP	5.72	□□□□□ -1.49
PXA1	YPL147W	APC5	Q08683	685 aa		5.72	□□□□□ -1.49
PXA1	YPL147W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	5.71	□□□□□ -1.5	not detected
PXA1	YPL147W	SAS3	P34218	831 aa		5.71	□□□□□ -1.5
PXA1	YPL147W	YIL055C	P40523	627 aa	Known RBP	5.71	□□□□□ -1.5
PXA1	YPL147W	TIM54	P47045	478 aa		5.71	□□□□□ -1.5
PXA1	YPL147W	NSE3	Q05541	303 aa		5.71	□□□□□ -1.5
PXA1	YPL147W	PHM6	Q05637	104 aa		5.71	□□□□□ -1.5
PXA1	YPL147W	RPL5	P26321	297 aa	Known RBP	5.71	□□□□□ -1.5
PXA1	YPL147W	LEM3	P42838	414 aa		5.71	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms