RNA–Protein interactions for RNA: YOL006C

TOP1, Transcript of Topoisomerase I, yeast

Gene TOP1, Length 2,310 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOP1	YOL006C	MAD1	P40957	749 aa		4.21	□□□□□ -1.74
TOP1	YOL006C	CWC15	Q03772	175 aa	Known RBP	4.21	□□□□□ -1.74
TOP1	YOL006C	ESS1	P22696	170 aa		4.2	□□□□□ -1.74
TOP1	YOL006C	MFT1	P33441	392 aa	Known RBP	4.2	□□□□□ -1.74
TOP1	YOL006C	POL5	P39985	1022 aa	Known RBP	4.2	□□□□□ -1.74
TOP1	YOL006C	FYV10	P40492	516 aa		4.2	□□□□□ -1.74
TOP1	YOL006C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
TOP1	YOL006C	ATG1	P53104	897 aa		4.2	□□□□□ -1.74
TOP1	YOL006C	VPS16	Q03308	798 aa		4.2	□□□□□ -1.74
TOP1	YOL006C	YMR196W	Q04336	1088 aa		4.2	□□□□□ -1.74
TOP1	YOL006C	WRS1	Q12109	432 aa	Known RBP	4.2	□□□□□ -1.74
TOP1	YOL006C	YOR131C	Q12486	218 aa		4.2	□□□□□ -1.74
TOP1	YOL006C	NKP1	Q12493	238 aa		4.2	□□□□□ -1.74
TOP1	YOL006C	CDC27	P38042	758 aa		4.2	□□□□□ -1.74
TOP1	YOL006C	ENP1	P38333	483 aa	Known RBP	4.2	□□□□□ -1.74
TOP1	YOL006C	FPK1	P53739	893 aa		4.2	□□□□□ -1.74
TOP1	YOL006C	NIS1	P53939	407 aa		4.2	□□□□□ -1.74
TOP1	YOL006C	COG4	Q06096	861 aa		4.2	□□□□□ -1.74
TOP1	YOL006C	PIN2	Q12057	282 aa		4.2	□□□□□ -1.74
TOP1	YOL006C	MMP1	Q12372	583 aa		4.2	□□□□□ -1.74
TOP1	YOL006C	MET6	P05694	767 aa	Known RBP	4.19	□□□□□ -1.74
TOP1	YOL006C	ARG8	P18544	423 aa		4.19	□□□□□ -1.74
TOP1	YOL006C	PWP2	P25635	923 aa	Known RBP	4.19	□□□□□ -1.74
TOP1	YOL006C	FUI1	P38196	639 aa		4.19	□□□□□ -1.74
TOP1	YOL006C	ORC6	P38826	435 aa		4.19	□□□□□ -1.74
TOP1	YOL006C	UBP12	P39538	1254 aa		4.19	□□□□□ -1.74
TOP1	YOL006C	UTP14	Q04500	899 aa	Known RBP	4.19	□□□□□ -1.74
TOP1	YOL006C	NUT2	Q06213	157 aa		4.19	□□□□□ -1.74
TOP1	YOL006C	GAL2	P13181	574 aa		4.18	□□□□□ -1.74
TOP1	YOL006C	CLB5	P30283	435 aa		4.18	□□□□□ -1.74
TOP1	YOL006C	RAD54	P32863	898 aa		4.18	□□□□□ -1.74
TOP1	YOL006C	RPS0A	P32905	252 aa	Known RBP	4.18	□□□□□ -1.74
TOP1	YOL006C	VPS24	P36095	224 aa	Known RBP	4.18	□□□□□ -1.74
TOP1	YOL006C	YEN1	P40028	759 aa		4.18	□□□□□ -1.74
TOP1	YOL006C	BDF2	Q07442	638 aa		4.18	□□□□□ -1.74
TOP1	YOL006C	THS1	P04801	734 aa	Known RBP	4.18	□□□□□ -1.74
TOP1	YOL006C	YJU3	P28321	313 aa		4.18	□□□□□ -1.74
TOP1	YOL006C	MET4	P32389	672 aa		4.18	□□□□□ -1.74
TOP1	YOL006C	MSH4	P40965	878 aa	Predicted RBP	4.18	□□□□□ -1.74
TOP1	YOL006C	YPP1	P46951	817 aa		4.18	□□□□□ -1.74
TOP1	YOL006C	RDS2	P19541	446 aa	Known RBP	4.17	□□□□□ -1.74
TOP1	YOL006C	CLN2	P20438	545 aa		4.17	□□□□□ -1.74
TOP1	YOL006C	SCJ1	P25303	377 aa		4.17	□□□□□ -1.74
TOP1	YOL006C	ITC1	P53125	1264 aa		4.17	□□□□□ -1.74
TOP1	YOL006C	CWC22	P53333	577 aa	Known RBP	4.17	□□□□□ -1.74
TOP1	YOL006C	ESF2	P53743	316 aa	Known RBP	4.17	□□□□□ -1.74
TOP1	YOL006C	ENT2	Q05785	613 aa		4.17	□□□□□ -1.74
TOP1	YOL006C	FRT1	Q99332	602 aa		4.17	□□□□□ -1.74
TOP1	YOL006C	TRX2	P22803	104 aa	Known RBP	4.17	□□□□□ -1.74
TOP1	YOL006C	MRPL32	P25348	183 aa		4.17	□□□□□ -1.74
TOP1	YOL006C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
TOP1	YOL006C	BOL3	P39724	118 aa		4.17	□□□□□ -1.74
TOP1	YOL006C	DPB3	P27344	201 aa		4.16	□□□□□ -1.74
TOP1	YOL006C	EMP47	P43555	445 aa		4.16	□□□□□ -1.74
TOP1	YOL006C	IES1	P43579	692 aa		4.16	□□□□□ -1.74
TOP1	YOL006C	YFR006W	P43590	535 aa		4.16	□□□□□ -1.74
TOP1	YOL006C	PUF6	Q04373	656 aa	Known RBP	4.16	□□□□□ -1.74
TOP1	YOL006C	RGR1	P19263	1082 aa		4.16	□□□□□ -1.74
TOP1	YOL006C	DBP1	P24784	617 aa	Known RBP	4.16	□□□□□ -1.74
TOP1	YOL006C	SVL3	Q03088	825 aa	Known RBP	4.16	□□□□□ -1.74
TOP1	YOL006C	SPR28	Q04921	423 aa		4.16	□□□□□ -1.74
TOP1	YOL006C	PNP1	Q05788	311 aa		4.16	□□□□□ -1.74
TOP1	YOL006C	RPN12	P32496	274 aa		4.15	□□□□□ -1.74
TOP1	YOL006C	FUR4	P05316	633 aa	Known RBP	4.15	□□□□□ -1.75
TOP1	YOL006C	GLO3	P38682	493 aa	Known RBP	4.15	□□□□□ -1.75
TOP1	YOL006C	QDR1	P40475	563 aa		4.15	□□□□□ -1.75
TOP1	YOL006C	ACF4	P47129	309 aa		4.15	□□□□□ -1.75
TOP1	YOL006C	ESF1	Q06344	628 aa	Known RBP	4.15	□□□□□ -1.75
TOP1	YOL006C	MIP1	P15801	1254 aa		4.14	□□□□□ -1.75
TOP1	YOL006C	MCM2	P29469	868 aa		4.14	□□□□□ -1.75
TOP1	YOL006C	RTT106	P40161	455 aa		4.14	□□□□□ -1.75
TOP1	YOL006C	NUP82	P40368	713 aa		4.14	□□□□□ -1.75
TOP1	YOL006C	RMD1	Q03441	430 aa		4.14	□□□□□ -1.75
TOP1	YOL006C	RLP24	Q07915	199 aa	Known RBP	4.14	□□□□□ -1.75
TOP1	YOL006C	MRC1	P25588	1096 aa		4.13	□□□□□ -1.75
TOP1	YOL006C	CRP1	P38845	465 aa	Known RBP	4.13	□□□□□ -1.75
TOP1	YOL006C	MPP10	P47083	593 aa	Known RBP	4.13	□□□□□ -1.75
TOP1	YOL006C	FOL1	P53848	824 aa		4.13	□□□□□ -1.75
TOP1	YOL006C	VMS1	Q04311	632 aa	Known RBP	4.13	□□□□□ -1.75
TOP1	YOL006C	MCM16	Q12262	181 aa		4.13	□□□□□ -1.75
TOP1	YOL006C	ERP4	Q12450	207 aa		4.13	□□□□□ -1.75
TOP1	YOL006C	BLI1	P35727	113 aa		4.13	□□□□□ -1.75
TOP1	YOL006C	BOI1	P38041	980 aa	Known RBP	4.13	□□□□□ -1.75
TOP1	YOL006C	HUL5	P53119	910 aa		4.13	□□□□□ -1.75
TOP1	YOL006C	SPT2	P06843	333 aa	Predicted RBP	4.12	□□□□□ -1.75
TOP1	YOL006C	RAD27	P26793	382 aa		4.12	□□□□□ -1.75
TOP1	YOL006C	RPT1	P33299	467 aa	Known RBP	4.12	□□□□□ -1.75
TOP1	YOL006C	PAF1	P38351	445 aa		4.12	□□□□□ -1.75
TOP1	YOL006C	RSC30	P38781	883 aa		4.12	□□□□□ -1.75
TOP1	YOL006C	MVP1	P40959	511 aa	Known RBP	4.12	□□□□□ -1.75
TOP1	YOL006C	DAK2	P43550	591 aa		4.12	□□□□□ -1.75
TOP1	YOL006C	MTO1	P53070	669 aa		4.12	□□□□□ -1.75
TOP1	YOL006C	PHO8	P11491	566 aa		4.12	□□□□□ -1.75
TOP1	YOL006C	SRM1	P21827	482 aa		4.12	□□□□□ -1.75
TOP1	YOL006C	NFU1	P32860	256 aa		4.12	□□□□□ -1.75
TOP1	YOL006C	YGR273C	P53329	174 aa		4.12	□□□□□ -1.75
TOP1	YOL006C	NAF1	P53919	492 aa	Known RBP	4.12	□□□□□ -1.75
TOP1	YOL006C	PPM2	Q08282	695 aa		4.12	□□□□□ -1.75
TOP1	YOL006C	SRS2	P12954	1174 aa		4.11	□□□□□ -1.75
TOP1	YOL006C	TIM23	P32897	222 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms