RNA–Protein interactions for RNA: YLR308W

CDA2, Transcript of Chitin deacetylase, yeastyeast

Gene CDA2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDA2YLR308W FIG4P42837 879 aa8.7□□□□□ -1.02
CDA2YLR308W VAC17P25591 423 aa8.69□□□□□ -1.02
CDA2YLR308W BIO2P32451 375 aa8.69□□□□□ -1.02
CDA2YLR308W IXR1P33417 597 aa8.69□□□□□ -1.02
CDA2YLR308W YPL062WQ02781 134 aa8.69□□□□□ -1.02
CDA2YLR308W YJL007CP47080 104 aa8.68□□□□□ -1.02
CDA2YLR308W YDJ1P25491 409 aaKnown RBP8.67□□□□□ -1.02
CDA2YLR308W CSE4P36012 229 aa8.67□□□□□ -1.02
CDA2YLR308W ENV9Q08651 330 aa8.66□□□□□ -1.02
CDA2YLR308W TEC1P18412 486 aa8.65□□□□□ -1.02
CDA2YLR308W HGH1P48362 394 aaKnown RBP8.65□□□□□ -1.02
CDA2YLR308W YDR444WQ04093 687 aa8.65□□□□□ -1.02
CDA2YLR308W RGA2Q06407 1009 aa8.65□□□□□ -1.02
CDA2YLR308W YJR115WP47152 169 aa8.64□□□□□ -1.03
CDA2YLR308W YNL108CP53929 270 aa8.64□□□□□ -1.03
CDA2YLR308W BIM1P40013 344 aa8.62□□□□□ -1.03
CDA2YLR308W APP1P53933 587 aa8.62□□□□□ -1.03
CDA2YLR308W YPR084WQ06821 456 aa8.62□□□□□ -1.03
CDA2YLR308W UGA3P26370 528 aa8.61□□□□□ -1.03
CDA2YLR308W ISF1P32488 338 aa8.61□□□□□ -1.03
CDA2YLR308W NAF1P53919 492 aaKnown RBP8.61□□□□□ -1.03
CDA2YLR308W ATG32P40458 529 aa8.6□□□□□ -1.03
CDA2YLR308W MSB3P48566 633 aaPredicted RBP8.6□□□□□ -1.03
CDA2YLR308W SPT5P27692 1063 aaKnown RBP8.58□□□□□ -1.04
CDA2YLR308W LCB5Q06147 687 aaKnown RBP8.58□□□□□ -1.04
CDA2YLR308W MCM16Q12262 181 aa8.58□□□□□ -1.04
CDA2YLR308W GUT2P32191 649 aa8.57□□□□□ -1.04
CDA2YLR308W ENO2P00925 437 aaKnown RBP8.56□□□□□ -1.04
CDA2YLR308W SUP45P12385 437 aaKnown RBP8.56□□□□□ -1.04
CDA2YLR308W EMP47P43555 445 aa8.56□□□□□ -1.04
CDA2YLR308W TAF7Q05021 590 aa8.56□□□□□ -1.04
CDA2YLR308W SRF1Q12516 437 aa8.56□□□□□ -1.04
CDA2YLR308W STE20Q03497 939 aaKnown RBP8.55□□□□□ -1.04
CDA2YLR308W TIF1P10081 395 aaKnown RBP8.54□□□□□ -1.04
CDA2YLR308W MRT4P33201 236 aaKnown RBP8.54□□□□□ -1.04
CDA2YLR308W FRA1Q07825 749 aa8.54□□□□□ -1.04
CDA2YLR308W EMW1P42842 904 aaKnown RBP8.52□□□□□ -1.05
CDA2YLR308W PTK2P47116 818 aaKnown RBP8.52□□□□□ -1.05
CDA2YLR308W RPL34BP40525 121 aaKnown RBP8.5□□□□□ -1.05
CDA2YLR308W RTG2P32608 588 aaKnown RBP8.48□□□□□ -1.05
CDA2YLR308W YBL086CP38177 466 aa8.48□□□□□ -1.05
CDA2YLR308W RIM21P48565 533 aa8.48□□□□□ -1.05
CDA2YLR308W MKS1P34072 584 aa8.47□□□□□ -1.05
CDA2YLR308W YPR204WQ08995 1032 aa8.47□□□□□ -1.05
CDA2YLR308W RTT106P40161 455 aa8.46□□□□□ -1.06
CDA2YLR308W YLR346CQ06139 101 aa8.46□□□□□ -1.06
CDA2YLR308W ENO1P00924 437 aaKnown RBP8.45□□□□□ -1.06
CDA2YLR308W DFG5Q05031 458 aa8.45□□□□□ -1.06
CDA2YLR308W OPT2Q06593 877 aa8.45□□□□□ -1.06
CDA2YLR308W ATG20Q07528 640 aa8.45□□□□□ -1.06
CDA2YLR308W YDL176WQ12027 708 aa8.45□□□□□ -1.06
CDA2YLR308W YPP1P46951 817 aa8.44□□□□□ -1.06
CDA2YLR308W RDS2P19541 446 aaKnown RBP8.43□□□□□ -1.06
CDA2YLR308W APL6P46682 809 aa8.43□□□□□ -1.06
CDA2YLR308W ISR1Q06098 443 aaKnown RBP8.43□□□□□ -1.06
CDA2YLR308W SOH1P38633 127 aa8.42□□□□□ -1.06
CDA2YLR308W NUP85P46673 744 aa8.42□□□□□ -1.06
CDA2YLR308W MRX12P47084 519 aa8.42□□□□□ -1.06
CDA2YLR308W FBP26P32604 452 aa8.41□□□□□ -1.06
CDA2YLR308W MRX10Q05648 414 aa8.41□□□□□ -1.06
CDA2YLR308W HAL5P38970 855 aaKnown RBP8.4□□□□□ -1.06
CDA2YLR308W ARG82P07250 355 aa8.39□□□□□ -1.07
CDA2YLR308W CAF120P53836 1060 aa8.39□□□□□ -1.07
CDA2YLR308W ISU1Q03020 165 aa8.38□□□□□ -1.07
CDA2YLR308W BDS1Q08347 646 aa8.37□□□□□ -1.07
CDA2YLR308W MIP1P15801 1254 aa8.36□□□□□ -1.07
CDA2YLR308W AAD14P42884 376 aa8.36□□□□□ -1.07
CDA2YLR308W STE6P12866 1290 aa8.35□□□□□ -1.07
CDA2YLR308W ACO2P39533 789 aa8.35□□□□□ -1.07
CDA2YLR308W SCW11P53189 542 aa8.35□□□□□ -1.07
CDA2YLR308W DLD1P32891 587 aa8.34□□□□□ -1.07
CDA2YLR308W GLY1P37303 387 aaKnown RBP8.34□□□□□ -1.07
CDA2YLR308W ATG3P40344 310 aa8.34□□□□□ -1.07
CDA2YLR308W LSC2P53312 427 aa8.34□□□□□ -1.07
CDA2YLR308W KTR7P40504 517 aa8.33□□□□□ -1.08
CDA2YLR308W UTP13Q05946 817 aaKnown RBP8.31□□□□□ -1.08
CDA2YLR308W UTR2P32623 467 aa8.3□□□□□ -1.08
CDA2YLR308W PEP12P32854 288 aa8.3□□□□□ -1.08
CDA2YLR308W UBP2Q01476 1272 aa8.3□□□□□ -1.08
CDA2YLR308W HDA3Q06623 655 aa8.3□□□□□ -1.08
CDA2YLR308W CBC2Q08920 208 aaKnown RBP RIP-Chip data8.3□□□□□ -1.08not detected
CDA2YLR308W TY1A-BLQ12266 440 aa8.3□□□□□ -1.08
CDA2YLR308W DAT1P13483 248 aaKnown RBP8.29□□□□□ -1.08
CDA2YLR308W CPS1P27614 576 aa8.28□□□□□ -1.08
CDA2YLR308W TTI1P36097 1038 aa8.28□□□□□ -1.08
CDA2YLR308W WTM2Q12206 467 aa8.28□□□□□ -1.08
CDA2YLR308W YIR007WP40566 764 aa8.27□□□□□ -1.09
CDA2YLR308W YJR098CP47139 656 aa8.27□□□□□ -1.09
CDA2YLR308W SPT2P06843 333 aaPredicted RBP8.26□□□□□ -1.09
CDA2YLR308W DLD3P39976 496 aaKnown RBP8.25□□□□□ -1.09
CDA2YLR308W TCB1Q12466 1186 aa8.25□□□□□ -1.09
CDA2YLR308W UTP7P40055 554 aaKnown RBP8.24□□□□□ -1.09
CDA2YLR308W RLF2Q12495 606 aa8.24□□□□□ -1.09
CDA2YLR308W PDI1P17967 522 aaKnown RBP8.23□□□□□ -1.09
CDA2YLR308W AIM9P40053 627 aaKnown RBP8.23□□□□□ -1.09
CDA2YLR308W RPP2BP02400 110 aaKnown RBP8.22□□□□□ -1.09
CDA2YLR308W TBS1P38114 1094 aa8.22□□□□□ -1.09
CDA2YLR308W SLX8P40072 274 aa8.22□□□□□ -1.09
CDA2YLR308W YGR035CP53222 116 aa8.21□□□□□ -1.1
CDA2YLR308W SIS2P36024 562 aa8.2□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms