RNA–Protein interactions for RNA: YLR308W

CDA2, Transcript of Chitin deacetylase, yeastyeast

Gene CDA2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDA2YLR308W MTC1P47018 478 aaKnown RBP17.69■□□□□ 0.42
CDA2YLR308W DRS1P32892 752 aaKnown RBP16.71■□□□□ 0.27
CDA2YLR308W FAP1P53971 965 aa16.08■□□□□ 0.16
CDA2YLR308W PRY3P47033 881 aa15.08■□□□□ 0
CDA2YLR308W PRI1P10363 409 aa14.94□□□□□ -0.02
CDA2YLR308W AAD16Q02895 342 aa14.88□□□□□ -0.03
CDA2YLR308W ISW2Q08773 1120 aa14.72□□□□□ -0.05
CDA2YLR308W RPG1P38249 964 aaKnown RBP14.55□□□□□ -0.08
CDA2YLR308W DIP2Q12220 943 aaPredicted RBP14.47□□□□□ -0.09
CDA2YLR308W BFR2Q06631 534 aaKnown RBP14.22□□□□□ -0.13
CDA2YLR308W TSR3Q12094 313 aaKnown RBP14.14□□□□□ -0.15
CDA2YLR308W YCK3P39962 524 aa14.12□□□□□ -0.15
CDA2YLR308W HAA1Q12753 694 aaKnown RBP14.11□□□□□ -0.15
CDA2YLR308W AVT3P36062 692 aa14.03□□□□□ -0.16
CDA2YLR308W RSE1Q04693 1361 aaKnown RBP14.01□□□□□ -0.17
CDA2YLR308W MRPL32P25348 183 aa13.62□□□□□ -0.23
CDA2YLR308W RPL17AP05740 184 aaKnown RBP13.58□□□□□ -0.24
CDA2YLR308W RPL17BP46990 184 aaKnown RBP13.58□□□□□ -0.24
CDA2YLR308W REB1P21538 810 aa13.56□□□□□ -0.24
CDA2YLR308W YGL015CP33199 130 aa13.06□□□□□ -0.32
CDA2YLR308W TFA1P36100 482 aa12.95□□□□□ -0.34
CDA2YLR308W SPT21P35209 758 aa12.91□□□□□ -0.34
CDA2YLR308W CDC27P38042 758 aa12.87□□□□□ -0.35
CDA2YLR308W YKR023WP36119 530 aaKnown RBP12.81□□□□□ -0.36
CDA2YLR308W HOP09932 586 aa12.59□□□□□ -0.39
CDA2YLR308W TFC8Q12308 588 aa12.56□□□□□ -0.4
CDA2YLR308W DCD1P06773 312 aa12.53□□□□□ -0.4
CDA2YLR308W UBP10P53874 792 aaPredicted RBP12.52□□□□□ -0.41
CDA2YLR308W MAP2P38174 421 aaKnown RBP12.5□□□□□ -0.41
CDA2YLR308W RIM101P33400 625 aa12.47□□□□□ -0.41
CDA2YLR308W SCY1P53009 804 aa12.25□□□□□ -0.45
CDA2YLR308W BCH2P36122 765 aa12.15□□□□□ -0.46
CDA2YLR308W SLX5P32828 619 aaKnown RBP12.1□□□□□ -0.47
CDA2YLR308W TIF4632P39936 914 aaKnown RBP12.06□□□□□ -0.48
CDA2YLR308W OXP1P28273 1286 aa12.05□□□□□ -0.48
CDA2YLR308W YIL055CP40523 627 aaKnown RBP11.97□□□□□ -0.49
CDA2YLR308W TGL3P40308 642 aa11.96□□□□□ -0.49
CDA2YLR308W BUD31P25337 157 aaPredicted RBP11.95□□□□□ -0.5
CDA2YLR308W PTP3P40048 928 aa11.95□□□□□ -0.5
CDA2YLR308W EPS1P40557 701 aa11.86□□□□□ -0.51
CDA2YLR308W YAH1Q12184 172 aaKnown RBP11.84□□□□□ -0.51
CDA2YLR308W BDF1P35817 686 aa11.81□□□□□ -0.52
CDA2YLR308W RSM7P47150 247 aa11.73□□□□□ -0.53
CDA2YLR308W BBC1P47068 1157 aa11.68□□□□□ -0.54
CDA2YLR308W UBP9P39967 754 aa11.66□□□□□ -0.54
CDA2YLR308W AI2P03876 854 aa11.63□□□□□ -0.55
CDA2YLR308W SSP1P38871 571 aa11.61□□□□□ -0.55
CDA2YLR308W YLR271WQ06152 274 aa11.61□□□□□ -0.55
CDA2YLR308W YOR238WQ08634 303 aa11.45□□□□□ -0.58
CDA2YLR308W ARP8Q12386 881 aaKnown RBP RIP-Chip data11.45□□□□□ -0.58not detected
CDA2YLR308W SIS1P25294 352 aaKnown RBP11.44□□□□□ -0.58
CDA2YLR308W MST1P07236 462 aa11.41□□□□□ -0.58
CDA2YLR308W NSR1P27476 414 aaKnown RBP RIP-Chip data11.38□□□□□ -0.59not detected
CDA2YLR308W YAP5P40574 245 aa11.35□□□□□ -0.59
CDA2YLR308W PSD2P53037 1138 aaKnown RBP11.34□□□□□ -0.59
CDA2YLR308W YBL029C-AQ3E756 94 aa11.29□□□□□ -0.6
CDA2YLR308W CST9Q06032 482 aa11.27□□□□□ -0.61
CDA2YLR308W MGA2P40578 1113 aa11.24□□□□□ -0.61
CDA2YLR308W MRM1P25270 412 aa11.22□□□□□ -0.61
CDA2YLR308W VNX1P42839 908 aa11.16□□□□□ -0.62
CDA2YLR308W WSC3Q12215 556 aa11.15□□□□□ -0.62
CDA2YLR308W GTT3P39996 337 aa11.14□□□□□ -0.63
CDA2YLR308W SPP1Q03012 353 aa11.09□□□□□ -0.63
CDA2YLR308W PIB1Q06651 286 aa11.09□□□□□ -0.63
CDA2YLR308W RTG3P38165 486 aa10.99□□□□□ -0.65
CDA2YLR308W TIF11P38912 153 aaKnown RBP10.97□□□□□ -0.65
CDA2YLR308W RCR1P38212 213 aa10.95□□□□□ -0.66
CDA2YLR308W YMR1P47147 688 aaKnown RBP RIP-Chip data10.94□□□□□ -0.66not detected
CDA2YLR308W VPS29P38759 282 aa10.93□□□□□ -0.66
CDA2YLR308W DBP1P24784 617 aaKnown RBP10.91□□□□□ -0.66
CDA2YLR308W YFR006WP43590 535 aa10.88□□□□□ -0.67
CDA2YLR308W ULI1P43604 169 aa10.86□□□□□ -0.67
CDA2YLR308W STS1P38637 319 aa10.82□□□□□ -0.68
CDA2YLR308W MSB4Q12317 492 aa10.82□□□□□ -0.68
CDA2YLR308W LDB19Q12502 818 aa10.81□□□□□ -0.68
CDA2YLR308W FKH1P40466 484 aa10.79□□□□□ -0.68
CDA2YLR308W SET4P42948 560 aa10.79□□□□□ -0.68
CDA2YLR308W EAP1P36041 632 aaKnown RBP10.78□□□□□ -0.68
CDA2YLR308W YOL036WQ08206 761 aa10.78□□□□□ -0.68
CDA2YLR308W IOC2Q12072 812 aa10.78□□□□□ -0.68
CDA2YLR308W AIR2Q12476 344 aaKnown RBP10.78□□□□□ -0.68
CDA2YLR308W VMA1P17255 1071 aaKnown RBP10.77□□□□□ -0.69
CDA2YLR308W YJL171CP46992 396 aa10.77□□□□□ -0.69
CDA2YLR308W RAM2P29703 316 aa10.75□□□□□ -0.69
CDA2YLR308W TRP5P00931 707 aaKnown RBP10.68□□□□□ -0.7
CDA2YLR308W SAM3Q08986 587 aa10.68□□□□□ -0.7
CDA2YLR308W RTG1P32607 177 aa10.62□□□□□ -0.71
CDA2YLR308W BMT6Q12291 365 aa10.6□□□□□ -0.71
CDA2YLR308W MAK11P20484 414 aaKnown RBP10.59□□□□□ -0.71
CDA2YLR308W GYP5Q12344 894 aa10.58□□□□□ -0.72
CDA2YLR308W YNL035CP53962 389 aaKnown RBP10.57□□□□□ -0.72
CDA2YLR308W NCR1Q12200 1170 aa10.56□□□□□ -0.72
CDA2YLR308W ABP1P15891 592 aaKnown RBP10.54□□□□□ -0.72
CDA2YLR308W DMA1P38823 416 aa10.53□□□□□ -0.72
CDA2YLR308W SEC61P32915 480 aa10.52□□□□□ -0.73
CDA2YLR308W MIF2P35201 549 aa10.51□□□□□ -0.73
CDA2YLR308W DCW1P36091 449 aa10.5□□□□□ -0.73
CDA2YLR308W HTA1P04911 132 aaKnown RBP10.49□□□□□ -0.73
CDA2YLR308W HTA2P04912 132 aa10.49□□□□□ -0.73
CDA2YLR308W TFG1P41895 735 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms